RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 TRAV13-2A0A0B4J235 113 aa1.51□□□□□ -2.17
CAPRIN1-208ENST00000530008 NRXN2Q9P2S2 1712 aa1.5□□□□□ -2.17
CAPRIN1-208ENST00000530008 CORTO00230 105 aa1.5□□□□□ -2.17
CAPRIN1-208ENST00000530008 SIX6O95475 246 aa1.5□□□□□ -2.17
CAPRIN1-208ENST00000530008 PPP3R2Q96LZ3 170 aa1.5□□□□□ -2.17
CAPRIN1-208ENST00000530008 Q96NJ1 140 aa1.5□□□□□ -2.17
CAPRIN1-208ENST00000530008 TNFP01375 233 aa1.49□□□□□ -2.17
CAPRIN1-208ENST00000530008 TPPP2P59282 170 aa1.49□□□□□ -2.17
CAPRIN1-208ENST00000530008 MRPL54Q6P161 138 aaKnown RBP1.49□□□□□ -2.17
CAPRIN1-208ENST00000530008 ESPL1Q14674 2120 aa1.49□□□□□ -2.17
CAPRIN1-208ENST00000530008 KTN1Q86UP2 1357 aaKnown RBP1.48□□□□□ -2.17
CAPRIN1-208ENST00000530008 F2Z2F3 143 aa1.48□□□□□ -2.17
CAPRIN1-208ENST00000530008 KDM6BO15054 1643 aa1.48□□□□□ -2.17
CAPRIN1-208ENST00000530008 GNG4P50150 75 aa1.47□□□□□ -2.17
CAPRIN1-208ENST00000530008 RBBP6Q7Z6E9 1792 aaKnown RBP1.47□□□□□ -2.17
CAPRIN1-208ENST00000530008 MYH7P12883 1935 aa1.46□□□□□ -2.18
CAPRIN1-208ENST00000530008 S100A1P23297 94 aa1.46□□□□□ -2.18
CAPRIN1-208ENST00000530008 C8orf59Q8N0T1 100 aaPredicted RBP1.46□□□□□ -2.18
CAPRIN1-208ENST00000530008 EIF4G3O43432 1585 aaKnown RBP1.46□□□□□ -2.18
CAPRIN1-208ENST00000530008 PHIPQ8WWQ0 1821 aa1.45□□□□□ -2.18
CAPRIN1-208ENST00000530008 OOSP1A8MZH6 123 aa1.45□□□□□ -2.18
CAPRIN1-208ENST00000530008 MRPS10P82664 201 aaKnown RBP1.45□□□□□ -2.18
CAPRIN1-208ENST00000530008 C9orf153Q5TBE3 101 aa1.45□□□□□ -2.18
CAPRIN1-208ENST00000530008 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.45□□□□□ -2.18
CAPRIN1-208ENST00000530008 AQP10Q96PS8 301 aa1.45□□□□□ -2.18
CAPRIN1-208ENST00000530008 BPESC1Q9GZL8 116 aa1.45□□□□□ -2.18
CAPRIN1-208ENST00000530008 QRICH2Q9H0J4 1663 aa1.45□□□□□ -2.18
CAPRIN1-208ENST00000530008 MYOM2P54296 1465 aa1.44□□□□□ -2.18
CAPRIN1-208ENST00000530008 GVQW2A0A096LPI5 108 aaPredicted RBP1.44□□□□□ -2.18
CAPRIN1-208ENST00000530008 ACYP2P14621 99 aa1.44□□□□□ -2.18
CAPRIN1-208ENST00000530008 KRTAP4-1Q9BYQ7 146 aa1.44□□□□□ -2.18
CAPRIN1-208ENST00000530008 C10orf95Q9H7T3 257 aa1.44□□□□□ -2.18
CAPRIN1-208ENST00000530008 IER3IP1Q9Y5U9 82 aa1.44□□□□□ -2.18
CAPRIN1-208ENST00000530008 ZDBF2Q9HCK1 2354 aa1.44□□□□□ -2.18
CAPRIN1-208ENST00000530008 HMCN1Q96RW7 5635 aa1.44□□□□□ -2.18
CAPRIN1-208ENST00000530008 PLXNA1Q9UIW2 1896 aa1.43□□□□□ -2.18
CAPRIN1-208ENST00000530008 TRGV1A0A0A0MS02 117 aa1.43□□□□□ -2.18
CAPRIN1-208ENST00000530008 PPP3R1P63098 170 aa1.43□□□□□ -2.18
CAPRIN1-208ENST00000530008 WHAMMP3Q1A5X7 153 aa1.43□□□□□ -2.18
CAPRIN1-208ENST00000530008 SMIM11BQ8TCY0 68 aa1.43□□□□□ -2.18
CAPRIN1-208ENST00000530008 WFDC6Q9BQY6 131 aa1.43□□□□□ -2.18
CAPRIN1-208ENST00000530008 FAM103A1Q9BTL3 118 aaKnown RBP1.43□□□□□ -2.18
CAPRIN1-208ENST00000530008 LOC285556D6RIA3 1793 aa1.43□□□□□ -2.18
CAPRIN1-208ENST00000530008 CPSF1Q10570 1443 aaKnown RBP1.42□□□□□ -2.18
CAPRIN1-208ENST00000530008 C10orf128Q5T292 105 aa1.42□□□□□ -2.18
CAPRIN1-208ENST00000530008 C5orf38Q86SI9 138 aa1.42□□□□□ -2.18
CAPRIN1-208ENST00000530008 SPANXDQ9BXN6 97 aa1.42□□□□□ -2.18
CAPRIN1-208ENST00000530008 CDK13Q14004 1512 aaKnown RBP1.41□□□□□ -2.18
CAPRIN1-208ENST00000530008 FBN3Q75N90 2809 aa1.41□□□□□ -2.18
CAPRIN1-208ENST00000530008 SCP2D1Q9UJQ7 156 aa1.41□□□□□ -2.18
CAPRIN1-208ENST00000530008 KIAA0100Q14667 2235 aaKnown RBP1.4□□□□□ -2.18
CAPRIN1-208ENST00000530008 TENM1Q9UKZ4 2725 aa1.4□□□□□ -2.18
CAPRIN1-208ENST00000530008 TTC9CQ8N5M4 171 aa1.4□□□□□ -2.19
CAPRIN1-208ENST00000530008 PRR15LQ9BU68 103 aa1.4□□□□□ -2.19
CAPRIN1-208ENST00000530008 MAP2P11137 1827 aaKnown RBP1.4□□□□□ -2.19
CAPRIN1-208ENST00000530008 LRRC37A3O60309 1634 aa1.4□□□□□ -2.19
CAPRIN1-208ENST00000530008 FAM135AQ9P2D6 1515 aa1.4□□□□□ -2.19
CAPRIN1-208ENST00000530008 MYH9P35579 1960 aaKnown RBP1.39□□□□□ -2.19
CAPRIN1-208ENST00000530008 VMO1Q7Z5L0 202 aa1.39□□□□□ -2.19
CAPRIN1-208ENST00000530008 PXDNQ92626 1479 aa1.38□□□□□ -2.19
CAPRIN1-208ENST00000530008 TANC1Q9C0D5 1861 aa1.38□□□□□ -2.19
CAPRIN1-208ENST00000530008 SSSCA1O60232 199 aa1.38□□□□□ -2.19
CAPRIN1-208ENST00000530008 S100PP25815 95 aa1.38□□□□□ -2.19
CAPRIN1-208ENST00000530008 SPATA8Q6RVD6 105 aa1.38□□□□□ -2.19
CAPRIN1-208ENST00000530008 COMMD6Q7Z4G1 85 aa1.38□□□□□ -2.19
CAPRIN1-208ENST00000530008 CGREF1Q99674 301 aa1.38□□□□□ -2.19
CAPRIN1-208ENST00000530008 PPIP5K1Q6PFW1 1433 aa1.38□□□□□ -2.19
CAPRIN1-208ENST00000530008 CUL7Q14999 1698 aa1.37□□□□□ -2.19
CAPRIN1-208ENST00000530008 TMEM14DPA8MWL7 114 aa1.37□□□□□ -2.19
CAPRIN1-208ENST00000530008 PPP1R17O96001 155 aa1.37□□□□□ -2.19
CAPRIN1-208ENST00000530008 SPINK7P58062 85 aa1.37□□□□□ -2.19
CAPRIN1-208ENST00000530008 CYP4F30PQ9H0H9 118 aa1.37□□□□□ -2.19
CAPRIN1-208ENST00000530008 KNTC1P50748 2209 aa1.37□□□□□ -2.19
CAPRIN1-208ENST00000530008 ARAP2Q8WZ64 1704 aa1.37□□□□□ -2.19
CAPRIN1-208ENST00000530008 NWD2Q9ULI1 1742 aa1.37□□□□□ -2.19
CAPRIN1-208ENST00000530008 SMIM6P0DI80 62 aa1.36□□□□□ -2.19
CAPRIN1-208ENST00000530008 SMARCA2P51531 1590 aa1.36□□□□□ -2.19
CAPRIN1-208ENST00000530008 TRAV1-2A0A0B4J238 106 aa1.35□□□□□ -2.19
CAPRIN1-208ENST00000530008 CCL18P55774 89 aa1.35□□□□□ -2.19
CAPRIN1-208ENST00000530008 Q6ZRX8 168 aa1.35□□□□□ -2.19
CAPRIN1-208ENST00000530008 BAGE3Q86Y29 109 aa1.35□□□□□ -2.19
CAPRIN1-208ENST00000530008 SVBPQ8N300 66 aa1.35□□□□□ -2.19
CAPRIN1-208ENST00000530008 TNS1Q9HBL0 1735 aaKnown RBP1.35□□□□□ -2.19
CAPRIN1-208ENST00000530008 ABCA1O95477 2261 aa1.35□□□□□ -2.19
CAPRIN1-208ENST00000530008 SSC5DA1L4H1 1573 aa1.34□□□□□ -2.19
CAPRIN1-208ENST00000530008 C20orf202A1L168 122 aa1.34□□□□□ -2.19
CAPRIN1-208ENST00000530008 FAM24AA6NFZ4 105 aa1.34□□□□□ -2.19
CAPRIN1-208ENST00000530008 KRTAP19-3Q7Z4W3 81 aa1.34□□□□□ -2.19
CAPRIN1-208ENST00000530008 LENEPQ9Y5L5 61 aa1.34□□□□□ -2.19
CAPRIN1-208ENST00000530008 PARP14Q460N5 1801 aa1.33□□□□□ -2.2
CAPRIN1-208ENST00000530008 TSLPQ969D9 159 aa1.33□□□□□ -2.2
CAPRIN1-208ENST00000530008 ARFGEF1Q9Y6D6 1849 aa1.33□□□□□ -2.2
CAPRIN1-208ENST00000530008 PZPP20742 1482 aa1.32□□□□□ -2.2
CAPRIN1-208ENST00000530008 ZMYM4Q5VZL5 1548 aa1.32□□□□□ -2.2
CAPRIN1-208ENST00000530008 UBE2L5PA0A1B0GUS4 154 aa1.32□□□□□ -2.2
CAPRIN1-208ENST00000530008 IFITM1P13164 125 aa1.32□□□□□ -2.2
CAPRIN1-208ENST00000530008 UBE2L3P68036 154 aaKnown RBP1.32□□□□□ -2.2
CAPRIN1-208ENST00000530008 DPH3P1Q9H4G8 78 aa1.32□□□□□ -2.2
CAPRIN1-208ENST00000530008 LINC00474Q9P2X8 69 aa1.32□□□□□ -2.2
CAPRIN1-208ENST00000530008 R4GMQ9 66 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms