RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 IGHV3-73A0A0B4J1V6 119 aa5.57□□□□□ -1.52
SSBP3-211ENST00000528787 TRAV8-6A0A0B4J262 113 aa5.57□□□□□ -1.52
SSBP3-211ENST00000528787 TMEM238LA0A1B0GVL6 79 aa5.57□□□□□ -1.52
SSBP3-211ENST00000528787 LINC01549A6NIU2 74 aa5.57□□□□□ -1.52
SSBP3-211ENST00000528787 NCR2O95944 276 aa5.57□□□□□ -1.52
SSBP3-211ENST00000528787 APCSP02743 223 aa5.57□□□□□ -1.52
SSBP3-211ENST00000528787 RAB4AP20338 218 aa5.57□□□□□ -1.52
SSBP3-211ENST00000528787 ELOBQ15370 118 aa5.57□□□□□ -1.52
SSBP3-211ENST00000528787 OR10J3Q5JRS4 329 aa5.57□□□□□ -1.52
SSBP3-211ENST00000528787 SUMO4Q6EEV6 95 aa5.57□□□□□ -1.52
SSBP3-211ENST00000528787 UBE2DNLQ8IWF7 75 aa5.57□□□□□ -1.52
SSBP3-211ENST00000528787 ATP6V0E2Q8NHE4 81 aa5.57□□□□□ -1.52
SSBP3-211ENST00000528787 KIR2DL4Q99706 377 aa5.57□□□□□ -1.52
SSBP3-211ENST00000528787 MSRB1Q9NZV6 116 aa5.57□□□□□ -1.52
SSBP3-211ENST00000528787 PRKDCP78527 4128 aaKnown RBP5.57□□□□□ -1.52
SSBP3-211ENST00000528787 A0A0J9YY99 117 aa5.56□□□□□ -1.52
SSBP3-211ENST00000528787 TRBV6-5A0A0K0K1A5 114 aa5.56□□□□□ -1.52
SSBP3-211ENST00000528787 M0QY20 66 aa5.56□□□□□ -1.52
SSBP3-211ENST00000528787 HOXA5P20719 270 aa5.56□□□□□ -1.52
SSBP3-211ENST00000528787 CASC10Q5T4H9 136 aa5.56□□□□□ -1.52
SSBP3-211ENST00000528787 TMEM136Q6ZRR5 245 aa5.56□□□□□ -1.52
SSBP3-211ENST00000528787 LINC00469Q8N7U9 141 aa5.56□□□□□ -1.52
SSBP3-211ENST00000528787 TMEM18Q96B42 140 aa5.56□□□□□ -1.52
SSBP3-211ENST00000528787 SAMD10Q9BYL1 202 aa5.56□□□□□ -1.52
SSBP3-211ENST00000528787 GTSF1LQ9H1H1 148 aa5.56□□□□□ -1.52
SSBP3-211ENST00000528787 JPT2Q9H910 190 aa5.56□□□□□ -1.52
SSBP3-211ENST00000528787 TRAPPC1Q9Y5R8 145 aa5.56□□□□□ -1.52
SSBP3-211ENST00000528787 TGP01266 2768 aa5.56□□□□□ -1.52
SSBP3-211ENST00000528787 TRAV9-2A0A087WT02 112 aa5.55□□□□□ -1.52
SSBP3-211ENST00000528787 I3L3M4 83 aa5.55□□□□□ -1.52
SSBP3-211ENST00000528787 VCYO14598 125 aa5.55□□□□□ -1.52
SSBP3-211ENST00000528787 PMCHP20382 165 aa5.55□□□□□ -1.52
SSBP3-211ENST00000528787 RPL32P62910 135 aaKnown RBP5.55□□□□□ -1.52
SSBP3-211ENST00000528787 COTL1Q14019 142 aa5.55□□□□□ -1.52
SSBP3-211ENST00000528787 LGALS9CQ6DKI2 356 aa5.55□□□□□ -1.52
SSBP3-211ENST00000528787 AMN1Q8IY45 258 aa5.55□□□□□ -1.52
SSBP3-211ENST00000528787 ZNRF2Q8NHG8 242 aa5.55□□□□□ -1.52
SSBP3-211ENST00000528787 VSIG2Q96IQ7 327 aa5.55□□□□□ -1.52
SSBP3-211ENST00000528787 MAP1LC3AQ9H492 121 aa5.55□□□□□ -1.52
SSBP3-211ENST00000528787 TRBV25-1A0A075B6N4 114 aa5.54□□□□□ -1.52
SSBP3-211ENST00000528787 A0A096LPF7 62 aa5.54□□□□□ -1.52
SSBP3-211ENST00000528787 GAGE12JA6NER3 117 aa5.54□□□□□ -1.52
SSBP3-211ENST00000528787 H7C423 109 aa5.54□□□□□ -1.52
SSBP3-211ENST00000528787 RAB5AP20339 215 aa5.54□□□□□ -1.52
SSBP3-211ENST00000528787 LINC00315P59091 139 aa5.54□□□□□ -1.52
SSBP3-211ENST00000528787 RAB5BP61020 215 aa5.54□□□□□ -1.52
SSBP3-211ENST00000528787 UBE2D3P61077 147 aa5.54□□□□□ -1.52
SSBP3-211ENST00000528787 SUMO2P61956 95 aaKnown RBP5.54□□□□□ -1.52
SSBP3-211ENST00000528787 UBE2D2P62837 147 aa5.54□□□□□ -1.52
SSBP3-211ENST00000528787 FABP9Q0Z7S8 132 aa5.54□□□□□ -1.52
SSBP3-211ENST00000528787 GAGE1Q13065 139 aa5.54□□□□□ -1.52
SSBP3-211ENST00000528787 GAGE4Q13068 117 aa5.54□□□□□ -1.52
SSBP3-211ENST00000528787 GAGE5Q13069 117 aa5.54□□□□□ -1.52
SSBP3-211ENST00000528787 MRPL51Q4U2R6 128 aaKnown RBP5.54□□□□□ -1.52
SSBP3-211ENST00000528787 GAGE13Q4V321 117 aa5.54□□□□□ -1.52
SSBP3-211ENST00000528787 ZFAND6Q6FIF0 208 aa5.54□□□□□ -1.52
SSBP3-211ENST00000528787 PRELID3AQ96N28 172 aa5.54□□□□□ -1.52
SSBP3-211ENST00000528787 CHCHD7Q9BUK0 85 aa5.54□□□□□ -1.52
SSBP3-211ENST00000528787 MRPL18Q9H0U6 180 aaKnown RBP5.54□□□□□ -1.52
SSBP3-211ENST00000528787 NXT2Q9NPJ8 142 aaKnown RBP5.54□□□□□ -1.52
SSBP3-211ENST00000528787 TRBV27A0A0K0K1C4 114 aa5.53□□□□□ -1.52
SSBP3-211ENST00000528787 D6R8Y8 96 aa5.53□□□□□ -1.52
SSBP3-211ENST00000528787 UBE2L6O14933 153 aa5.53□□□□□ -1.52
SSBP3-211ENST00000528787 TNFRSF6BO95407 300 aa5.53□□□□□ -1.52
SSBP3-211ENST00000528787 FCER1GP30273 86 aa5.53□□□□□ -1.52
SSBP3-211ENST00000528787 TTC32Q5I0X7 151 aa5.53□□□□□ -1.52
SSBP3-211ENST00000528787 LELP1Q5T871 98 aa5.53□□□□□ -1.52
SSBP3-211ENST00000528787 C10orf126Q8N4M7 172 aa5.53□□□□□ -1.52
SSBP3-211ENST00000528787 NEXN-AS1Q8NBZ9 246 aa5.53□□□□□ -1.52
SSBP3-211ENST00000528787 RNF185Q96GF1 192 aa5.53□□□□□ -1.52
SSBP3-211ENST00000528787 UPK3BQ9BT76 320 aa5.53□□□□□ -1.52
SSBP3-211ENST00000528787 APLNQ9ULZ1 77 aa5.53□□□□□ -1.52
SSBP3-211ENST00000528787 TGIF2-C20orf24A0A0A6YYL0 155 aa5.52□□□□□ -1.53
SSBP3-211ENST00000528787 IGHV1-24A0A0C4DH33 117 aa5.52□□□□□ -1.53
SSBP3-211ENST00000528787 SDHAF1A6NFY7 115 aa5.52□□□□□ -1.53
SSBP3-211ENST00000528787 PRSS47A8MTI9 375 aa5.52□□□□□ -1.53
SSBP3-211ENST00000528787 LINC00694P0DN24 101 aa5.52□□□□□ -1.53
SSBP3-211ENST00000528787 RPS10P46783 165 aaKnown RBP5.52□□□□□ -1.53
SSBP3-211ENST00000528787 ORMDL2Q53FV1 153 aa5.52□□□□□ -1.53
SSBP3-211ENST00000528787 LYPD5Q6UWN5 251 aa5.52□□□□□ -1.53
SSBP3-211ENST00000528787 CBLN2Q8IUK8 224 aa5.52□□□□□ -1.53
SSBP3-211ENST00000528787 MRPS16Q9Y3D3 137 aaKnown RBP5.52□□□□□ -1.53
SSBP3-211ENST00000528787 A0A087WX48 190 aa5.51□□□□□ -1.53
SSBP3-211ENST00000528787 TRBV6-8A0A0A6YYG3 113 aa5.51□□□□□ -1.53
SSBP3-211ENST00000528787 IQCJQ1A5X6 159 aa5.51□□□□□ -1.53
SSBP3-211ENST00000528787 ATRAIDQ6UW56 229 aa5.51□□□□□ -1.53
SSBP3-211ENST00000528787 PRSS3P2Q8NHM4 247 aa5.51□□□□□ -1.53
SSBP3-211ENST00000528787 TMEM70Q9BUB7 260 aa5.51□□□□□ -1.53
SSBP3-211ENST00000528787 SMIM2Q9BVW6 85 aa5.51□□□□□ -1.53
SSBP3-211ENST00000528787 TRAV26-2A0A0B4J265 109 aa5.5□□□□□ -1.53
SSBP3-211ENST00000528787 SIVA1O15304 175 aa5.5□□□□□ -1.53
SSBP3-211ENST00000528787 ZNF25P17030 456 aaPredicted RBP5.5□□□□□ -1.53
SSBP3-211ENST00000528787 AMTP48728 403 aa5.5□□□□□ -1.53
SSBP3-211ENST00000528787 POLR2KP53803 58 aaKnown RBP5.5□□□□□ -1.53
SSBP3-211ENST00000528787 PAPPA-AS1Q5QFB9 102 aa5.5□□□□□ -1.53
SSBP3-211ENST00000528787 Q6ZSN1 163 aa5.5□□□□□ -1.53
SSBP3-211ENST00000528787 Q8N8P6 123 aa5.5□□□□□ -1.53
SSBP3-211ENST00000528787 NRACQ8N912 160 aa5.5□□□□□ -1.53
SSBP3-211ENST00000528787 TMEM101Q96IK0 257 aa5.5□□□□□ -1.53
SSBP3-211ENST00000528787 TMEM243Q9BU79 118 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms