RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 MDFICQ9P1T7 246 aa9.62□□□□□ -0.87
TRAPPC9-208ENST00000520857 ZNF580Q9UK33 172 aa9.62□□□□□ -0.87
TRAPPC9-208ENST00000520857 MUC4Q99102 2169 aa9.62□□□□□ -0.87
TRAPPC9-208ENST00000520857 RPL13AP40429 203 aaKnown RBP9.62□□□□□ -0.87
TRAPPC9-208ENST00000520857 TRAV8-3A0A0A6YYJ7 113 aa9.62□□□□□ -0.87
TRAPPC9-208ENST00000520857 KNCNA6PVL3 124 aa9.62□□□□□ -0.87
TRAPPC9-208ENST00000520857 C3orf56Q8N813 242 aa9.62□□□□□ -0.87
TRAPPC9-208ENST00000520857 LEPROTO15243 131 aa9.61□□□□□ -0.87
TRAPPC9-208ENST00000520857 PRRC2AP48634 2157 aaKnown RBP9.61□□□□□ -0.87
TRAPPC9-208ENST00000520857 POLR2KP53803 58 aaKnown RBP9.61□□□□□ -0.87
TRAPPC9-208ENST00000520857 DGAT2L7PQ6IED9 249 aa9.61□□□□□ -0.87
TRAPPC9-208ENST00000520857 DAZ1Q9NQZ3 744 aaKnown RBP9.61□□□□□ -0.87
TRAPPC9-208ENST00000520857 H3BUX3 64 aa9.61□□□□□ -0.87
TRAPPC9-208ENST00000520857 U3KQE9 123 aa9.61□□□□□ -0.87
TRAPPC9-208ENST00000520857 CHD8Q9HCK8 2581 aa9.61□□□□□ -0.87
TRAPPC9-208ENST00000520857 CEMP1Q6PRD7 247 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC9-208ENST00000520857 RELNP78509 3460 aa9.6□□□□□ -0.87
TRAPPC9-208ENST00000520857 CRLF1O75462 422 aa9.6□□□□□ -0.87
TRAPPC9-208ENST00000520857 NDUFV3P56181 108 aaKnown RBP9.6□□□□□ -0.87
TRAPPC9-208ENST00000520857 SMIM20Q8N5G0 67 aa9.6□□□□□ -0.87
TRAPPC9-208ENST00000520857 RHODO00212 210 aa9.6□□□□□ -0.87
TRAPPC9-208ENST00000520857 CLEC2BQ92478 149 aa9.6□□□□□ -0.87
TRAPPC9-208ENST00000520857 ZNF625Q96I27 306 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC9-208ENST00000520857 NDUFA12Q9UI09 145 aa9.6□□□□□ -0.87
TRAPPC9-208ENST00000520857 TNFRSF18Q9Y5U5 241 aa9.6□□□□□ -0.87
TRAPPC9-208ENST00000520857 SNRPD3P62318 126 aaKnown RBP9.59□□□□□ -0.87
TRAPPC9-208ENST00000520857 BLCAPP62952 87 aa9.59□□□□□ -0.87
TRAPPC9-208ENST00000520857 DAND5Q8N907 189 aa9.59□□□□□ -0.87
TRAPPC9-208ENST00000520857 AJUBAQ96IF1 538 aa9.59□□□□□ -0.87
TRAPPC9-208ENST00000520857 RNF223E7ERA6 249 aa9.59□□□□□ -0.87
TRAPPC9-208ENST00000520857 MED14OSP0DP75 135 aa9.59□□□□□ -0.87
TRAPPC9-208ENST00000520857 ZNF22P17026 224 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC9-208ENST00000520857 EDN2P20800 178 aa9.59□□□□□ -0.87
TRAPPC9-208ENST00000520857 DUX3Q96PT4 197 aa9.59□□□□□ -0.87
TRAPPC9-208ENST00000520857 PTPN13Q12923 2485 aa9.59□□□□□ -0.87
TRAPPC9-208ENST00000520857 DCHS2Q6V1P9 2916 aa9.59□□□□□ -0.87
TRAPPC9-208ENST00000520857 SVEP1Q4LDE5 3571 aa9.59□□□□□ -0.87
TRAPPC9-208ENST00000520857 DUX5Q96PT3 197 aa9.59□□□□□ -0.87
TRAPPC9-208ENST00000520857 CCDC179H3BU77 68 aa9.58□□□□□ -0.88
TRAPPC9-208ENST00000520857 TRIAP1O43715 76 aa9.58□□□□□ -0.88
TRAPPC9-208ENST00000520857 ELANEP08246 267 aa9.58□□□□□ -0.88
TRAPPC9-208ENST00000520857 IGHV4OR15-8A0A075B7B6 117 aa9.58□□□□□ -0.88
TRAPPC9-208ENST00000520857 A0A087WW49 117 aa9.58□□□□□ -0.88
TRAPPC9-208ENST00000520857 I3L3M4 83 aa9.58□□□□□ -0.88
TRAPPC9-208ENST00000520857 IGHV3-30-3P0DP02 117 aa9.58□□□□□ -0.88
TRAPPC9-208ENST00000520857 A0A0J9YXY3 114 aa9.58□□□□□ -0.88
TRAPPC9-208ENST00000520857 TMEM223A0PJW6 202 aa9.58□□□□□ -0.88
TRAPPC9-208ENST00000520857 A8MZ25 164 aa9.58□□□□□ -0.88
TRAPPC9-208ENST00000520857 SVIPQ8NHG7 77 aa9.58□□□□□ -0.88
TRAPPC9-208ENST00000520857 TMEM263Q8WUH6 116 aaKnown RBP9.58□□□□□ -0.88
TRAPPC9-208ENST00000520857 SETD2Q9BYW2 2564 aaPredicted RBP9.57□□□□□ -0.88
TRAPPC9-208ENST00000520857 Q6ZSV7 163 aa9.57□□□□□ -0.88
TRAPPC9-208ENST00000520857 P0DMU3 169 aa9.57□□□□□ -0.88
TRAPPC9-208ENST00000520857 FAM231AP0DMU4 169 aa9.57□□□□□ -0.88
TRAPPC9-208ENST00000520857 FAM231CP0DMU5 169 aa9.57□□□□□ -0.88
TRAPPC9-208ENST00000520857 TMEM95Q3KNT9 176 aa9.57□□□□□ -0.88
TRAPPC9-208ENST00000520857 C20orf203Q8NBC4 194 aa9.57□□□□□ -0.88
TRAPPC9-208ENST00000520857 USMG5Q96IX5 58 aa9.57□□□□□ -0.88
TRAPPC9-208ENST00000520857 ACACBO00763 2458 aa9.56□□□□□ -0.88
TRAPPC9-208ENST00000520857 TRBV27A0A0K0K1C4 114 aa9.56□□□□□ -0.88
TRAPPC9-208ENST00000520857 TRBV10-2A0A0K0K1G8 114 aa9.56□□□□□ -0.88
TRAPPC9-208ENST00000520857 ICOSQ9Y6W8 199 aa9.56□□□□□ -0.88
TRAPPC9-208ENST00000520857 USP9XQ93008 2570 aaPredicted RBP9.56□□□□□ -0.88
TRAPPC9-208ENST00000520857 A0A0B4J2C4 111 aa9.56□□□□□ -0.88
TRAPPC9-208ENST00000520857 LINC00315P59091 139 aa9.56□□□□□ -0.88
TRAPPC9-208ENST00000520857 IGHV1OR15-1A0A075B7D0 117 aa9.55□□□□□ -0.88
TRAPPC9-208ENST00000520857 IGHV3-38A0A0C4DH36 116 aa9.55□□□□□ -0.88
TRAPPC9-208ENST00000520857 ADORA2A-AS1P86434 159 aa9.55□□□□□ -0.88
TRAPPC9-208ENST00000520857 RHOHQ15669 191 aa9.55□□□□□ -0.88
TRAPPC9-208ENST00000520857 KIF25-AS1Q9Y6Z4 181 aa9.55□□□□□ -0.88
TRAPPC9-208ENST00000520857 FAM208BQ5VWN6 2430 aa9.55□□□□□ -0.88
TRAPPC9-208ENST00000520857 M0QY20 66 aa9.55□□□□□ -0.88
TRAPPC9-208ENST00000520857 MEIG1Q5JSS6 88 aa9.55□□□□□ -0.88
TRAPPC9-208ENST00000520857 C11orf71Q6IPW1 123 aa9.55□□□□□ -0.88
TRAPPC9-208ENST00000520857 SPTBN4Q9H254 2564 aa9.54□□□□□ -0.88
TRAPPC9-208ENST00000520857 IGLV4-3A0A075B6K6 122 aa9.54□□□□□ -0.88
TRAPPC9-208ENST00000520857 CACNA1AO00555 2505 aa9.54□□□□□ -0.88
TRAPPC9-208ENST00000520857 TLN2Q9Y4G6 2542 aa9.54□□□□□ -0.88
TRAPPC9-208ENST00000520857 IGHV1-69P01742 117 aa9.54□□□□□ -0.88
TRAPPC9-208ENST00000520857 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC9-208ENST00000520857 IGKV2-29A2NJV5 120 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC9-208ENST00000520857 SOCS3O14543 225 aa9.53□□□□□ -0.88
TRAPPC9-208ENST00000520857 A0A1W2PPR1 153 aa9.53□□□□□ -0.88
TRAPPC9-208ENST00000520857 K7ENP7 123 aa9.53□□□□□ -0.88
TRAPPC9-208ENST00000520857 LMO4P61968 165 aa9.53□□□□□ -0.88
TRAPPC9-208ENST00000520857 IGHV4-38-2P0DP08 117 aa9.53□□□□□ -0.88
TRAPPC9-208ENST00000520857 CIRBPQ14011 172 aaKnown RBP9.53□□□□□ -0.88
TRAPPC9-208ENST00000520857 KHDC1LQ5JSQ8 128 aa9.53□□□□□ -0.88
TRAPPC9-208ENST00000520857 SBSPONQ8IVN8 264 aa9.53□□□□□ -0.88
TRAPPC9-208ENST00000520857 IGHV3-16A0A0C4DH30 117 aa9.52□□□□□ -0.88
TRAPPC9-208ENST00000520857 LGALS9O00182 355 aa9.52□□□□□ -0.88
TRAPPC9-208ENST00000520857 PROK1P58294 105 aa9.52□□□□□ -0.88
TRAPPC9-208ENST00000520857 SYNJ2BPP57105 145 aa9.52□□□□□ -0.89
TRAPPC9-208ENST00000520857 FBXL19-AS1Q494R0 122 aa9.52□□□□□ -0.89
TRAPPC9-208ENST00000520857 KLLNB2CW77 178 aa9.52□□□□□ -0.89
TRAPPC9-208ENST00000520857 RPL32P62910 135 aaKnown RBP9.51□□□□□ -0.89
TRAPPC9-208ENST00000520857 HERV-K104P63124 156 aa9.51□□□□□ -0.89
TRAPPC9-208ENST00000520857 AMELXQ99217 191 aa9.51□□□□□ -0.89
TRAPPC9-208ENST00000520857 CITED1Q99966 193 aa9.51□□□□□ -0.89
TRAPPC9-208ENST00000520857 TRGV11A0A075B6L2 103 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms