RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 IGHV3-30-3P0DP02 117 aa8.59□□□□□ -1.03
CLCN3-210ENST00000515420 IGHV3-30-5P0DP03 117 aa8.59□□□□□ -1.03
CLCN3-210ENST00000515420 NTF3P20783 257 aa8.59□□□□□ -1.03
CLCN3-210ENST00000515420 TMEM97Q5BJF2 176 aa8.59□□□□□ -1.03
CLCN3-210ENST00000515420 CT83Q5H943 113 aa8.59□□□□□ -1.03
CLCN3-210ENST00000515420 CDPF1Q6NVV7 123 aa8.59□□□□□ -1.03
CLCN3-210ENST00000515420 DAZ4Q86SG3 579 aaKnown RBP8.59□□□□□ -1.03
CLCN3-210ENST00000515420 NIT1Q86X76 327 aa8.59□□□□□ -1.03
CLCN3-210ENST00000515420 DPH3P1Q9H4G8 78 aa8.59□□□□□ -1.03
CLCN3-210ENST00000515420 DAZ3Q9NR90 486 aaKnown RBP8.59□□□□□ -1.03
CLCN3-210ENST00000515420 KIAA1109Q2LD37 5005 aa8.59□□□□□ -1.03
CLCN3-210ENST00000515420 A8MWL6 223 aa8.58□□□□□ -1.04
CLCN3-210ENST00000515420 SRP19P09132 144 aaKnown RBP8.58□□□□□ -1.04
CLCN3-210ENST00000515420 CEBPGP53567 150 aa8.58□□□□□ -1.04
CLCN3-210ENST00000515420 SSTP61278 116 aa8.58□□□□□ -1.04
CLCN3-210ENST00000515420 DNAJC30Q96LL9 226 aa8.58□□□□□ -1.04
CLCN3-210ENST00000515420 PGPEP1Q9NXJ5 209 aa8.58□□□□□ -1.04
CLCN3-210ENST00000515420 URGCP-MRPS24S4R325 110 aa8.58□□□□□ -1.04
CLCN3-210ENST00000515420 HERC2O95714 4834 aa8.57□□□□□ -1.04
CLCN3-210ENST00000515420 A0A087WTM6 91 aa8.57□□□□□ -1.04
CLCN3-210ENST00000515420 TRBV6-8A0A0A6YYG3 113 aa8.57□□□□□ -1.04
CLCN3-210ENST00000515420 TRAV8-3A0A0A6YYJ7 113 aa8.57□□□□□ -1.04
CLCN3-210ENST00000515420 ZNF727A8MUV8 499 aa8.57□□□□□ -1.04
CLCN3-210ENST00000515420 M0QY20 66 aa8.57□□□□□ -1.04
CLCN3-210ENST00000515420 GATCO43716 136 aaKnown RBP8.57□□□□□ -1.04
CLCN3-210ENST00000515420 KRTAP10-2P60368 255 aa8.57□□□□□ -1.04
CLCN3-210ENST00000515420 PKIAP61925 76 aa8.57□□□□□ -1.04
CLCN3-210ENST00000515420 FAM74A3Q4VXF1 159 aa8.57□□□□□ -1.04
CLCN3-210ENST00000515420 LINC01551Q86U37 167 aa8.57□□□□□ -1.04
CLCN3-210ENST00000515420 SMDT1Q9H4I9 107 aa8.57□□□□□ -1.04
CLCN3-210ENST00000515420 FAM231BA6NCW3 169 aa8.56□□□□□ -1.04
CLCN3-210ENST00000515420 PSCAO43653 123 aa8.56□□□□□ -1.04
CLCN3-210ENST00000515420 CDK2AP2O75956 126 aa8.56□□□□□ -1.04
CLCN3-210ENST00000515420 MGPP08493 103 aa8.56□□□□□ -1.04
CLCN3-210ENST00000515420 FOXA3P55318 350 aaPredicted RBP8.56□□□□□ -1.04
CLCN3-210ENST00000515420 ELOBQ15370 118 aa8.56□□□□□ -1.04
CLCN3-210ENST00000515420 KCNIP4Q6PIL6 250 aa8.56□□□□□ -1.04
CLCN3-210ENST00000515420 TM2D2Q9BX73 214 aa8.56□□□□□ -1.04
CLCN3-210ENST00000515420 GFRA4Q9GZZ7 299 aa8.56□□□□□ -1.04
CLCN3-210ENST00000515420 COX11Q9Y6N1 276 aa8.56□□□□□ -1.04
CLCN3-210ENST00000515420 A0A087WX48 190 aa8.55□□□□□ -1.04
CLCN3-210ENST00000515420 TWIST1Q15672 202 aa8.55□□□□□ -1.04
CLCN3-210ENST00000515420 SUMO4Q6EEV6 95 aa8.55□□□□□ -1.04
CLCN3-210ENST00000515420 RASL11AQ6T310 242 aa8.55□□□□□ -1.04
CLCN3-210ENST00000515420 Q8N3U1 123 aa8.55□□□□□ -1.04
CLCN3-210ENST00000515420 GTSF1Q8WW33 167 aa8.55□□□□□ -1.04
CLCN3-210ENST00000515420 FRZBQ92765 325 aa8.55□□□□□ -1.04
CLCN3-210ENST00000515420 Q9HAA7 133 aa8.55□□□□□ -1.04
CLCN3-210ENST00000515420 OSTCQ9NRP0 149 aa8.55□□□□□ -1.04
CLCN3-210ENST00000515420 PEA15Q15121 130 aa8.54□□□□□ -1.04
CLCN3-210ENST00000515420 SMIM15Q7Z3B0 74 aa8.54□□□□□ -1.04
CLCN3-210ENST00000515420 TSKUQ8WUA8 353 aa8.54□□□□□ -1.04
CLCN3-210ENST00000515420 RMI2Q96E14 147 aa8.54□□□□□ -1.04
CLCN3-210ENST00000515420 NIT2Q9NQR4 276 aa8.54□□□□□ -1.04
CLCN3-210ENST00000515420 LRCOL1A6NCL2 159 aa8.53□□□□□ -1.04
CLCN3-210ENST00000515420 TMEM241Q24JQ0 296 aa8.53□□□□□ -1.04
CLCN3-210ENST00000515420 C15orf54Q8N8G6 183 aa8.53□□□□□ -1.04
CLCN3-210ENST00000515420 PGLYRP4Q96LB8 373 aa8.53□□□□□ -1.04
CLCN3-210ENST00000515420 TRBV25-1A0A075B6N4 114 aa8.52□□□□□ -1.05
CLCN3-210ENST00000515420 Q0VG73 95 aa8.52□□□□□ -1.05
CLCN3-210ENST00000515420 IQCJQ1A5X6 159 aa8.52□□□□□ -1.05
CLCN3-210ENST00000515420 ATRAIDQ6UW56 229 aa8.52□□□□□ -1.05
CLCN3-210ENST00000515420 NTM-AS1Q6ZSK4 140 aa8.52□□□□□ -1.05
CLCN3-210ENST00000515420 NTN5Q8WTR8 489 aaPredicted RBP8.52□□□□□ -1.05
CLCN3-210ENST00000515420 ISOC2Q96AB3 205 aa8.52□□□□□ -1.05
CLCN3-210ENST00000515420 BORCS7Q96B45 105 aa8.52□□□□□ -1.05
CLCN3-210ENST00000515420 IGHV1-24A0A0C4DH33 117 aa8.51□□□□□ -1.05
CLCN3-210ENST00000515420 HIGD1CA8MV81 97 aa8.51□□□□□ -1.05
CLCN3-210ENST00000515420 CHCHD5Q9BSY4 110 aa8.51□□□□□ -1.05
CLCN3-210ENST00000515420 NAT8Q9UHE5 227 aa8.51□□□□□ -1.05
CLCN3-210ENST00000515420 KLK12Q9UKR0 248 aa8.51□□□□□ -1.05
CLCN3-210ENST00000515420 A0A1B0GUT8 65 aa8.5□□□□□ -1.05
CLCN3-210ENST00000515420 TMEM262E9PQX1 116 aa8.5□□□□□ -1.05
CLCN3-210ENST00000515420 RPL23P62829 140 aaKnown RBP8.5□□□□□ -1.05
CLCN3-210ENST00000515420 MPV17L2Q567V2 206 aa8.5□□□□□ -1.05
CLCN3-210ENST00000515420 LRP1BQ9NZR2 4599 aa8.5□□□□□ -1.05
CLCN3-210ENST00000515420 V9GYV3 84 aa8.5□□□□□ -1.05
CLCN3-210ENST00000515420 RYR1P21817 5038 aa8.5□□□□□ -1.05
CLCN3-210ENST00000515420 C9JQL5 133 aa8.49□□□□□ -1.05
CLCN3-210ENST00000515420 SRSF3P84103 164 aaKnown RBP8.49□□□□□ -1.05
CLCN3-210ENST00000515420 Q8N814 137 aa8.49□□□□□ -1.05
CLCN3-210ENST00000515420 GATD1Q8NB37 220 aa8.49□□□□□ -1.05
CLCN3-210ENST00000515420 UBE2WQ96B02 151 aa8.49□□□□□ -1.05
CLCN3-210ENST00000515420 CRPP02741 224 aa8.48□□□□□ -1.05
CLCN3-210ENST00000515420 LORP23490 312 aaPredicted RBP8.48□□□□□ -1.05
CLCN3-210ENST00000515420 ADIRFQ15847 76 aa8.48□□□□□ -1.05
CLCN3-210ENST00000515420 TMEM191AQ9H0A3 160 aa8.48□□□□□ -1.05
CLCN3-210ENST00000515420 IGKV2D-24A0A075B6R9 120 aa8.47□□□□□ -1.05
CLCN3-210ENST00000515420 A0A1B0GUV1 79 aa8.47□□□□□ -1.05
CLCN3-210ENST00000515420 ANGP03950 147 aaKnown RBP8.47□□□□□ -1.05
CLCN3-210ENST00000515420 RAB14P61106 215 aa8.47□□□□□ -1.05
CLCN3-210ENST00000515420 COTL1Q14019 142 aa8.47□□□□□ -1.05
CLCN3-210ENST00000515420 MIAQ16674 131 aa8.47□□□□□ -1.05
CLCN3-210ENST00000515420 TMEM243Q9BU79 118 aa8.47□□□□□ -1.05
CLCN3-210ENST00000515420 PRR34Q9NV39 138 aa8.47□□□□□ -1.05
CLCN3-210ENST00000515420 NAT8BQ9UHF3 227 aa8.47□□□□□ -1.05
CLCN3-210ENST00000515420 DNAH5Q8TE73 4624 aa8.47□□□□□ -1.05
CLCN3-210ENST00000515420 IGLV5-52A0A0A0MRZ9 124 aa8.46□□□□□ -1.06
CLCN3-210ENST00000515420 TRAV26-2A0A0B4J265 109 aa8.46□□□□□ -1.06
CLCN3-210ENST00000515420 TRBV6-5A0A0K0K1A5 114 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms