RNA–Protein interactions for RNA: ENST00000514649.5

TNFRSF8-205, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,412 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-205ENST00000514649 PRO1854Q9UHT4 67 aa13.59□□□□□ -0.23
TNFRSF8-205ENST00000514649 MOB4Q9Y3A3 225 aa13.59□□□□□ -0.23
TNFRSF8-205ENST00000514649 IGHV1-69DA0A0B4J2H0 117 aa13.58□□□□□ -0.24
TNFRSF8-205ENST00000514649 IGHV3-11P01762 117 aa13.58□□□□□ -0.24
TNFRSF8-205ENST00000514649 IGHV3-30P01768 117 aa13.58□□□□□ -0.24
TNFRSF8-205ENST00000514649 IGHV3-30-5P0DP03 117 aa13.58□□□□□ -0.24
TNFRSF8-205ENST00000514649 POLR2KP53803 58 aaKnown RBP13.58□□□□□ -0.24
TNFRSF8-205ENST00000514649 HERVK_113P61574 105 aa13.58□□□□□ -0.24
TNFRSF8-205ENST00000514649 TTC32Q5I0X7 151 aa13.58□□□□□ -0.24
TNFRSF8-205ENST00000514649 SPANXCQ9NY87 97 aa13.58□□□□□ -0.24
TNFRSF8-205ENST00000514649 IGHV4OR15-8A0A075B7B6 117 aa13.58□□□□□ -0.24
TNFRSF8-205ENST00000514649 A0A087WW49 117 aa13.58□□□□□ -0.24
TNFRSF8-205ENST00000514649 TSPEAR-AS2P59090 65 aa13.58□□□□□ -0.24
TNFRSF8-205ENST00000514649 A0A087WWL8 130 aa13.56□□□□□ -0.24
TNFRSF8-205ENST00000514649 A0A1B0GX51 115 aa13.56□□□□□ -0.24
TNFRSF8-205ENST00000514649 NXPH4O95158 308 aa13.56□□□□□ -0.24
TNFRSF8-205ENST00000514649 TMEM170BQ5T4T1 132 aa13.56□□□□□ -0.24
TNFRSF8-205ENST00000514649 SUMO4Q6EEV6 95 aa13.56□□□□□ -0.24
TNFRSF8-205ENST00000514649 SLC25A29Q8N8R3 303 aa13.56□□□□□ -0.24
TNFRSF8-205ENST00000514649 ZNRF2Q8NHG8 242 aa13.56□□□□□ -0.24
TNFRSF8-205ENST00000514649 KIR2DL5BQ8NHK3 375 aa13.56□□□□□ -0.24
TNFRSF8-205ENST00000514649 LINC01600Q96MT4 127 aa13.56□□□□□ -0.24
TNFRSF8-205ENST00000514649 VPS13CQ709C8 3753 aa13.56□□□□□ -0.24
TNFRSF8-205ENST00000514649 J3KT08 172 aa13.55□□□□□ -0.24
TNFRSF8-205ENST00000514649 MDFICQ9P1T7 246 aa13.55□□□□□ -0.24
TNFRSF8-205ENST00000514649 TRAV4A0A0B4J268 109 aa13.55□□□□□ -0.24
TNFRSF8-205ENST00000514649 F5H697 171 aa13.55□□□□□ -0.24
TNFRSF8-205ENST00000514649 VCYO14598 125 aa13.55□□□□□ -0.24
TNFRSF8-205ENST00000514649 CRIP2P52943 208 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF8-205ENST00000514649 FAM159AQ6UWV7 190 aa13.54□□□□□ -0.24
TNFRSF8-205ENST00000514649 FAM19A5Q7Z5A7 132 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF8-205ENST00000514649 TMEM141Q96I45 108 aa13.54□□□□□ -0.24
TNFRSF8-205ENST00000514649 RHPN1-AS1Q9BWJ2 59 aa13.54□□□□□ -0.24
TNFRSF8-205ENST00000514649 C9JAW5 83 aa13.54□□□□□ -0.24
TNFRSF8-205ENST00000514649 BRD3OSQ6XYD6 125 aa13.54□□□□□ -0.24
TNFRSF8-205ENST00000514649 SDHAF1A6NFY7 115 aa13.53□□□□□ -0.24
TNFRSF8-205ENST00000514649 RPS28P62857 69 aaKnown RBP13.53□□□□□ -0.24
TNFRSF8-205ENST00000514649 HIVEP3Q5T1R4 2406 aa13.53□□□□□ -0.24
TNFRSF8-205ENST00000514649 SPTAN1Q13813 2472 aaKnown RBP13.53□□□□□ -0.24
TNFRSF8-205ENST00000514649 P0DMU3 169 aa13.53□□□□□ -0.24
TNFRSF8-205ENST00000514649 FAM231AP0DMU4 169 aa13.53□□□□□ -0.24
TNFRSF8-205ENST00000514649 FAM231CP0DMU5 169 aa13.53□□□□□ -0.24
TNFRSF8-205ENST00000514649 BBC3Q96PG8 261 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF8-205ENST00000514649 TIMM17AQ99595 171 aa13.53□□□□□ -0.24
TNFRSF8-205ENST00000514649 ZNF876PQ49A33 203 aa13.52□□□□□ -0.24
TNFRSF8-205ENST00000514649 AMELXQ99217 191 aa13.52□□□□□ -0.24
TNFRSF8-205ENST00000514649 KLLNB2CW77 178 aa13.52□□□□□ -0.25
TNFRSF8-205ENST00000514649 J3QQQ9 107 aa13.51□□□□□ -0.25
TNFRSF8-205ENST00000514649 CRLF1O75462 422 aa13.51□□□□□ -0.25
TNFRSF8-205ENST00000514649 Q8N1Y9 231 aa13.51□□□□□ -0.25
TNFRSF8-205ENST00000514649 PRB1P04280 392 aa13.51□□□□□ -0.25
TNFRSF8-205ENST00000514649 EDN2P20800 178 aa13.51□□□□□ -0.25
TNFRSF8-205ENST00000514649 RPL13AP40429 203 aaKnown RBP13.51□□□□□ -0.25
TNFRSF8-205ENST00000514649 LY6EQ16553 131 aa13.51□□□□□ -0.25
TNFRSF8-205ENST00000514649 TRAV12-3A0A0B4J271 114 aa13.5□□□□□ -0.25
TNFRSF8-205ENST00000514649 FAM74A4Q5TZK3 123 aa13.5□□□□□ -0.25
TNFRSF8-205ENST00000514649 USMG5Q96IX5 58 aa13.5□□□□□ -0.25
TNFRSF8-205ENST00000514649 OPRPNQ99935 248 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF8-205ENST00000514649 ZNF256Q9Y2P7 627 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF8-205ENST00000514649 TRBV27A0A0K0K1C4 114 aa13.5□□□□□ -0.25
TNFRSF8-205ENST00000514649 LINC00694P0DN24 101 aa13.5□□□□□ -0.25
TNFRSF8-205ENST00000514649 IGHV3-33P01772 117 aa13.49□□□□□ -0.25
TNFRSF8-205ENST00000514649 NTN5Q8WTR8 489 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF8-205ENST00000514649 KMT2BQ9UMN6 2715 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF8-205ENST00000514649 A0A0B4J2C4 111 aa13.48□□□□□ -0.25
TNFRSF8-205ENST00000514649 IGHV1-69P01742 117 aa13.48□□□□□ -0.25
TNFRSF8-205ENST00000514649 LGALS3P17931 250 aaKnown RBP13.48□□□□□ -0.25
TNFRSF8-205ENST00000514649 MRPL23Q16540 153 aaKnown RBP13.48□□□□□ -0.25
TNFRSF8-205ENST00000514649 TRPT1Q86TN4 253 aaKnown RBP13.48□□□□□ -0.25
TNFRSF8-205ENST00000514649 TMEM101Q96IK0 257 aa13.48□□□□□ -0.25
TNFRSF8-205ENST00000514649 LINC01587Q99440 93 aa13.48□□□□□ -0.25
TNFRSF8-205ENST00000514649 TRAV8-4A0A0B4J246 113 aa13.48□□□□□ -0.25
TNFRSF8-205ENST00000514649 ATXN8Q156A1 80 aa13.48□□□□□ -0.25
TNFRSF8-205ENST00000514649 ODF3Q96PU9 254 aa13.48□□□□□ -0.25
TNFRSF8-205ENST00000514649 ABCA2Q9BZC7 2435 aa13.47□□□□□ -0.25
TNFRSF8-205ENST00000514649 LGALS9O00182 355 aa13.47□□□□□ -0.25
TNFRSF8-205ENST00000514649 SEC61GP60059 68 aa13.47□□□□□ -0.25
TNFRSF8-205ENST00000514649 TMEM263Q8WUH6 116 aaKnown RBP13.47□□□□□ -0.25
TNFRSF8-205ENST00000514649 DAZ1Q9NQZ3 744 aaKnown RBP13.47□□□□□ -0.25
TNFRSF8-205ENST00000514649 BLCAPP62952 87 aa13.47□□□□□ -0.25
TNFRSF8-205ENST00000514649 TRBV6-5A0A0K0K1A5 114 aa13.46□□□□□ -0.25
TNFRSF8-205ENST00000514649 EIF4EBP3O60516 100 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF8-205ENST00000514649 IGHG2P01859 326 aa13.46□□□□□ -0.25
TNFRSF8-205ENST00000514649 LINC01620Q4KN68 170 aa13.46□□□□□ -0.25
TNFRSF8-205ENST00000514649 CHD6Q8TD26 2715 aa13.46□□□□□ -0.26
TNFRSF8-205ENST00000514649 C15orf53Q8NAA6 179 aa13.45□□□□□ -0.26
TNFRSF8-205ENST00000514649 COL12A1Q99715 3063 aa13.45□□□□□ -0.26
TNFRSF8-205ENST00000514649 IGHV3-64A0A075B6Q5 118 aa13.44□□□□□ -0.26
TNFRSF8-205ENST00000514649 H3BUA1 57 aa13.44□□□□□ -0.26
TNFRSF8-205ENST00000514649 M0QY20 66 aa13.44□□□□□ -0.26
TNFRSF8-205ENST00000514649 DCANP1Q8TF63 244 aa13.44□□□□□ -0.26
TNFRSF8-205ENST00000514649 ZNF462Q96JM2 2506 aa13.44□□□□□ -0.26
TNFRSF8-205ENST00000514649 TRBV10-2A0A0K0K1G8 114 aa13.44□□□□□ -0.26
TNFRSF8-205ENST00000514649 TMEM223A0PJW6 202 aa13.44□□□□□ -0.26
TNFRSF8-205ENST00000514649 ZNF56Q15929 161 aa13.44□□□□□ -0.26
TNFRSF8-205ENST00000514649 TRAV12-2A0A075B6T6 113 aa13.43□□□□□ -0.26
TNFRSF8-205ENST00000514649 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF8-205ENST00000514649 IGHV3-16A0A0C4DH30 117 aa13.43□□□□□ -0.26
TNFRSF8-205ENST00000514649 GNLYP22749 145 aa13.43□□□□□ -0.26
TNFRSF8-205ENST00000514649 DUX3Q96PT4 197 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms