RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 VCX2Q9H322 139 aa5.64□□□□□ -1.51
NEDD4-210ENST00000513957 CHTOPQ9Y3Y2 248 aaKnown RBP5.64□□□□□ -1.51
NEDD4-210ENST00000513957 ZNF727A8MUV8 499 aa5.63□□□□□ -1.51
NEDD4-210ENST00000513957 SIVA1O15304 175 aa5.63□□□□□ -1.51
NEDD4-210ENST00000513957 CRYGDP07320 174 aa5.63□□□□□ -1.51
NEDD4-210ENST00000513957 SRP19P09132 144 aaKnown RBP5.63□□□□□ -1.51
NEDD4-210ENST00000513957 TRGC1P0CF51 173 aa5.63□□□□□ -1.51
NEDD4-210ENST00000513957 SMIM17P0DL12 118 aa5.63□□□□□ -1.51
NEDD4-210ENST00000513957 CTRLP40313 264 aa5.63□□□□□ -1.51
NEDD4-210ENST00000513957 RAB4BP61018 213 aa5.63□□□□□ -1.51
NEDD4-210ENST00000513957 RAB14P61106 215 aa5.63□□□□□ -1.51
NEDD4-210ENST00000513957 PEA15Q15121 130 aa5.63□□□□□ -1.51
NEDD4-210ENST00000513957 LYPD5Q6UWN5 251 aa5.63□□□□□ -1.51
NEDD4-210ENST00000513957 OR10AG1Q8NH19 301 aa5.63□□□□□ -1.51
NEDD4-210ENST00000513957 RPP21Q9H633 154 aaKnown RBP5.63□□□□□ -1.51
NEDD4-210ENST00000513957 IGLV2-18A0A075B6J9 118 aa5.62□□□□□ -1.51
NEDD4-210ENST00000513957 TRAV9-2A0A087WT02 112 aa5.62□□□□□ -1.51
NEDD4-210ENST00000513957 A0A087WWC5 75 aa5.62□□□□□ -1.51
NEDD4-210ENST00000513957 FAM231BA6NCW3 169 aa5.62□□□□□ -1.51
NEDD4-210ENST00000513957 A8MWL6 223 aa5.62□□□□□ -1.51
NEDD4-210ENST00000513957 K7EN84 100 aa5.62□□□□□ -1.51
NEDD4-210ENST00000513957 LINC00694P0DN24 101 aa5.62□□□□□ -1.51
NEDD4-210ENST00000513957 C1orf134Q5TEV5 83 aa5.62□□□□□ -1.51
NEDD4-210ENST00000513957 FAM74A4Q5TZK3 123 aa5.62□□□□□ -1.51
NEDD4-210ENST00000513957 CD164L2Q6UWJ8 174 aa5.62□□□□□ -1.51
NEDD4-210ENST00000513957 LINC01551Q86U37 167 aa5.62□□□□□ -1.51
NEDD4-210ENST00000513957 C10orf126Q8N4M7 172 aa5.62□□□□□ -1.51
NEDD4-210ENST00000513957 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.62□□□□□ -1.51
NEDD4-210ENST00000513957 IGHV3-73A0A0B4J1V6 119 aa5.61□□□□□ -1.51
NEDD4-210ENST00000513957 TRAV8-6A0A0B4J262 113 aa5.61□□□□□ -1.51
NEDD4-210ENST00000513957 H7C1H1 209 aa5.61□□□□□ -1.51
NEDD4-210ENST00000513957 DNAH10OSP0CZ25 163 aa5.61□□□□□ -1.51
NEDD4-210ENST00000513957 CEBPGP53567 150 aa5.61□□□□□ -1.51
NEDD4-210ENST00000513957 FOXA3P55318 350 aaPredicted RBP5.61□□□□□ -1.51
NEDD4-210ENST00000513957 ERVFC1-1P60608 527 aa5.61□□□□□ -1.51
NEDD4-210ENST00000513957 RPL36AP83881 106 aaKnown RBP5.61□□□□□ -1.51
NEDD4-210ENST00000513957 UBE2V1Q13404 147 aa5.61□□□□□ -1.51
NEDD4-210ENST00000513957 ZNF56Q15929 161 aa5.61□□□□□ -1.51
NEDD4-210ENST00000513957 LELP1Q5T871 98 aa5.61□□□□□ -1.51
NEDD4-210ENST00000513957 C6orf223Q8N319 242 aa5.61□□□□□ -1.51
NEDD4-210ENST00000513957 OR10G8Q8NGN5 311 aa5.61□□□□□ -1.51
NEDD4-210ENST00000513957 ATP6V0E2Q8NHE4 81 aa5.61□□□□□ -1.51
NEDD4-210ENST00000513957 RPL36ALQ969Q0 106 aaKnown RBP5.61□□□□□ -1.51
NEDD4-210ENST00000513957 SAMD10Q9BYL1 202 aa5.61□□□□□ -1.51
NEDD4-210ENST00000513957 GFRA4Q9GZZ7 299 aa5.61□□□□□ -1.51
NEDD4-210ENST00000513957 RNASE7Q9H1E1 156 aaKnown RBP5.61□□□□□ -1.51
NEDD4-210ENST00000513957 GTSF1LQ9H1H1 148 aa5.61□□□□□ -1.51
NEDD4-210ENST00000513957 JPT2Q9H910 190 aa5.61□□□□□ -1.51
NEDD4-210ENST00000513957 OSTCQ9NRP0 149 aa5.61□□□□□ -1.51
NEDD4-210ENST00000513957 TRBV7-3A0A075B6L6 115 aa5.6□□□□□ -1.51
NEDD4-210ENST00000513957 LOC100131303A0A0U1RQF7 123 aa5.6□□□□□ -1.51
NEDD4-210ENST00000513957 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
NEDD4-210ENST00000513957 M0R2N4 97 aa5.6□□□□□ -1.51
NEDD4-210ENST00000513957 GATCO43716 136 aaKnown RBP5.6□□□□□ -1.51
NEDD4-210ENST00000513957 EVI2AP22794 236 aa5.6□□□□□ -1.51
NEDD4-210ENST00000513957 TMEM241Q24JQ0 296 aa5.6□□□□□ -1.51
NEDD4-210ENST00000513957 TMEM97Q5BJF2 176 aa5.6□□□□□ -1.51
NEDD4-210ENST00000513957 LINC01556Q5JQF7 62 aa5.6□□□□□ -1.51
NEDD4-210ENST00000513957 NFE4Q86UQ8 179 aa5.6□□□□□ -1.51
NEDD4-210ENST00000513957 C15orf54Q8N8G6 183 aa5.6□□□□□ -1.51
NEDD4-210ENST00000513957 NAT8Q9UHE5 227 aa5.6□□□□□ -1.51
NEDD4-210ENST00000513957 FRAS1Q86XX4 4008 aa5.59□□□□□ -1.51
NEDD4-210ENST00000513957 IGHV3-38A0A0C4DH36 116 aa5.59□□□□□ -1.51
NEDD4-210ENST00000513957 RTL8CO15255 209 aa5.59□□□□□ -1.51
NEDD4-210ENST00000513957 GZMBP10144 247 aa5.59□□□□□ -1.51
NEDD4-210ENST00000513957 PKIAP61925 76 aa5.59□□□□□ -1.51
NEDD4-210ENST00000513957 CLLU1Q5K131 121 aa5.59□□□□□ -1.51
NEDD4-210ENST00000513957 LYZL1Q6UWQ5 148 aa5.59□□□□□ -1.51
NEDD4-210ENST00000513957 SMIM15Q7Z3B0 74 aa5.59□□□□□ -1.51
NEDD4-210ENST00000513957 C14orf178Q8N769 122 aaPredicted RBP5.59□□□□□ -1.51
NEDD4-210ENST00000513957 TSKUQ8WUA8 353 aa5.59□□□□□ -1.51
NEDD4-210ENST00000513957 FRZBQ92765 325 aa5.59□□□□□ -1.51
NEDD4-210ENST00000513957 BORCS7Q96B45 105 aa5.59□□□□□ -1.51
NEDD4-210ENST00000513957 DNAJC30Q96LL9 226 aa5.59□□□□□ -1.51
NEDD4-210ENST00000513957 DPH3P1Q9H4G8 78 aa5.59□□□□□ -1.51
NEDD4-210ENST00000513957 KIF25-AS1Q9Y6Z4 181 aa5.59□□□□□ -1.51
NEDD4-210ENST00000513957 GAGE12JA6NER3 117 aa5.58□□□□□ -1.52
NEDD4-210ENST00000513957 NTF3P20783 257 aa5.58□□□□□ -1.52
NEDD4-210ENST00000513957 GAGE1Q13065 139 aa5.58□□□□□ -1.52
NEDD4-210ENST00000513957 GAGE4Q13068 117 aa5.58□□□□□ -1.52
NEDD4-210ENST00000513957 GAGE5Q13069 117 aa5.58□□□□□ -1.52
NEDD4-210ENST00000513957 LAGE3Q14657 143 aa5.58□□□□□ -1.52
NEDD4-210ENST00000513957 OR10J3Q5JRS4 329 aa5.58□□□□□ -1.52
NEDD4-210ENST00000513957 Q6ZSN1 163 aa5.58□□□□□ -1.52
NEDD4-210ENST00000513957 DAZ4Q86SG3 579 aaKnown RBP5.58□□□□□ -1.52
NEDD4-210ENST00000513957 WFDC10BQ8IUB3 73 aa5.58□□□□□ -1.52
NEDD4-210ENST00000513957 ISOC2Q96AB3 205 aa5.58□□□□□ -1.52
NEDD4-210ENST00000513957 TMEM18Q96B42 140 aa5.58□□□□□ -1.52
NEDD4-210ENST00000513957 CHCHD7Q9BUK0 85 aa5.58□□□□□ -1.52
NEDD4-210ENST00000513957 TM2D2Q9BX73 214 aa5.58□□□□□ -1.52
NEDD4-210ENST00000513957 DAZ3Q9NR90 486 aaKnown RBP5.58□□□□□ -1.52
NEDD4-210ENST00000513957 DNAH2Q9P225 4427 aa5.58□□□□□ -1.52
NEDD4-210ENST00000513957 LINC00315P59091 139 aa5.57□□□□□ -1.52
NEDD4-210ENST00000513957 UBE2D3P61077 147 aa5.57□□□□□ -1.52
NEDD4-210ENST00000513957 RPL23P62829 140 aaKnown RBP5.57□□□□□ -1.52
NEDD4-210ENST00000513957 UBE2D2P62837 147 aa5.57□□□□□ -1.52
NEDD4-210ENST00000513957 PNRC1Q12796 327 aaPredicted RBP5.57□□□□□ -1.52
NEDD4-210ENST00000513957 TWIST1Q15672 202 aa5.57□□□□□ -1.52
NEDD4-210ENST00000513957 GTSF1Q8WW33 167 aa5.57□□□□□ -1.52
NEDD4-210ENST00000513957 KRTAP1-5Q9BYS1 174 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms