RNA–Protein interactions for RNA: ENST00000513893.5

LINC00461-215, long intergenic non-protein coding RNA 461, human

TSL 4

Gene LINC00461, Length 555 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00461-215	ENST00000513893	TOR2A	Q5JU69	321 aa		10.93	□□□□□ -0.66
LINC00461-215	ENST00000513893	AP1S3	Q96PC3	154 aa		10.93	□□□□□ -0.66
LINC00461-215	ENST00000513893	KLK12	Q9UKR0	248 aa		10.93	□□□□□ -0.66
LINC00461-215	ENST00000513893	SMIM17	P0DL12	118 aa		10.92	□□□□□ -0.66
LINC00461-215	ENST00000513893	RPS20	P60866	119 aa	Known RBP	10.92	□□□□□ -0.66
LINC00461-215	ENST00000513893	BLOC1S1	P78537	153 aa		10.92	□□□□□ -0.66
LINC00461-215	ENST00000513893	SUMO4	Q6EEV6	95 aa		10.91	□□□□□ -0.66
LINC00461-215	ENST00000513893	NTM-AS1	Q6ZSK4	140 aa		10.91	□□□□□ -0.66
LINC00461-215	ENST00000513893	SMIM12	Q96EX1	92 aa		10.91	□□□□□ -0.66
LINC00461-215	ENST00000513893	TRBV6-8	A0A0A6YYG3	113 aa		10.9	□□□□□ -0.66
LINC00461-215	ENST00000513893	TMEM262	E9PQX1	116 aa		10.9	□□□□□ -0.66
LINC00461-215	ENST00000513893	LAGE3	Q14657	143 aa		10.9	□□□□□ -0.66
LINC00461-215	ENST00000513893		Q8N814	137 aa		10.9	□□□□□ -0.66
LINC00461-215	ENST00000513893	LYPD6B	Q8NI32	183 aa		10.9	□□□□□ -0.66
LINC00461-215	ENST00000513893	UBE2W	Q96B02	151 aa		10.9	□□□□□ -0.66
LINC00461-215	ENST00000513893	RPP21	Q9H633	154 aa	Known RBP	10.9	□□□□□ -0.66
LINC00461-215	ENST00000513893	IGLV5-52	A0A0A0MRZ9	124 aa		10.89	□□□□□ -0.67
LINC00461-215	ENST00000513893		M0QY20	66 aa		10.89	□□□□□ -0.67
LINC00461-215	ENST00000513893	NTF3	P20783	257 aa		10.89	□□□□□ -0.67
LINC00461-215	ENST00000513893	XG	P55808	180 aa		10.89	□□□□□ -0.67
LINC00461-215	ENST00000513893	CACNG7	P62955	275 aa		10.89	□□□□□ -0.67
LINC00461-215	ENST00000513893	MPV17L2	Q567V2	206 aa		10.89	□□□□□ -0.67
LINC00461-215	ENST00000513893	BAALC	Q8WXS3	180 aa		10.89	□□□□□ -0.67
LINC00461-215	ENST00000513893	URGCP-MRPS24	S4R325	110 aa		10.89	□□□□□ -0.67
LINC00461-215	ENST00000513893		A0A087WX48	190 aa		10.88	□□□□□ -0.67
LINC00461-215	ENST00000513893	TAGLN2	P37802	199 aa	Known RBP	10.88	□□□□□ -0.67
LINC00461-215	ENST00000513893	FOXA3	P55318	350 aa	Predicted RBP	10.88	□□□□□ -0.67
LINC00461-215	ENST00000513893	CDPF1	Q6NVV7	123 aa		10.88	□□□□□ -0.67
LINC00461-215	ENST00000513893		Q8N976	141 aa		10.88	□□□□□ -0.67
LINC00461-215	ENST00000513893	GTSF1	Q8WW33	167 aa		10.88	□□□□□ -0.67
LINC00461-215	ENST00000513893	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	10.87	□□□□□ -0.67
LINC00461-215	ENST00000513893	IGKV2D-24	A0A075B6R9	120 aa		10.87	□□□□□ -0.67
LINC00461-215	ENST00000513893	TRAV8-3	A0A0A6YYJ7	113 aa		10.87	□□□□□ -0.67
LINC00461-215	ENST00000513893	XKRY2	A2RUG3	117 aa		10.87	□□□□□ -0.67
LINC00461-215	ENST00000513893	GCSH	P23434	173 aa		10.87	□□□□□ -0.67
LINC00461-215	ENST00000513893	CTRL	P40313	264 aa		10.87	□□□□□ -0.67
LINC00461-215	ENST00000513893	GAGE6	Q13070	117 aa		10.87	□□□□□ -0.67
LINC00461-215	ENST00000513893	C15orf54	Q8N8G6	183 aa		10.87	□□□□□ -0.67
LINC00461-215	ENST00000513893	CHCHD5	Q9BSY4	110 aa		10.87	□□□□□ -0.67
LINC00461-215	ENST00000513893	EIF5A2	Q9GZV4	153 aa	Known RBP	10.87	□□□□□ -0.67
LINC00461-215	ENST00000513893	BIN3	Q9NQY0	253 aa		10.87	□□□□□ -0.67
LINC00461-215	ENST00000513893	TRAV26-2	A0A0B4J265	109 aa		10.86	□□□□□ -0.67
LINC00461-215	ENST00000513893	TMEM250	H0YL14	139 aa		10.86	□□□□□ -0.67
LINC00461-215	ENST00000513893	TWIST1	Q15672	202 aa		10.86	□□□□□ -0.67
LINC00461-215	ENST00000513893	CLPSL2	Q6UWE3	100 aa		10.86	□□□□□ -0.67
LINC00461-215	ENST00000513893		Q8N1X5	172 aa		10.86	□□□□□ -0.67
LINC00461-215	ENST00000513893	TM2D2	Q9BX73	214 aa		10.86	□□□□□ -0.67
LINC00461-215	ENST00000513893		F2Z2F3	143 aa		10.85	□□□□□ -0.67
LINC00461-215	ENST00000513893	GATC	O43716	136 aa	Known RBP	10.85	□□□□□ -0.67
LINC00461-215	ENST00000513893	SRP19	P09132	144 aa	Known RBP	10.85	□□□□□ -0.67
LINC00461-215	ENST00000513893	LINC01620	Q4KN68	170 aa		10.85	□□□□□ -0.67
LINC00461-215	ENST00000513893	ATRAID	Q6UW56	229 aa		10.85	□□□□□ -0.67
LINC00461-215	ENST00000513893	ENHO	Q6UWT2	76 aa		10.85	□□□□□ -0.67
LINC00461-215	ENST00000513893	SMR3B	P02814	79 aa	Predicted RBP	10.84	□□□□□ -0.67
LINC00461-215	ENST00000513893	TRGC1	P0CF51	173 aa		10.84	□□□□□ -0.67
LINC00461-215	ENST00000513893	KCNIP4	Q6PIL6	250 aa		10.84	□□□□□ -0.67
LINC00461-215	ENST00000513893	PGLYRP4	Q96LB8	373 aa		10.84	□□□□□ -0.67
LINC00461-215	ENST00000513893	FAM210A	Q96ND0	272 aa		10.84	□□□□□ -0.67
LINC00461-215	ENST00000513893	DPH3P1	Q9H4G8	78 aa		10.84	□□□□□ -0.67
LINC00461-215	ENST00000513893	FAM30A	Q9NZY2	134 aa		10.84	□□□□□ -0.67
LINC00461-215	ENST00000513893		C9JQL5	133 aa		10.83	□□□□□ -0.68
LINC00461-215	ENST00000513893	ANG	P03950	147 aa	Known RBP	10.83	□□□□□ -0.68
LINC00461-215	ENST00000513893	RASL11A	Q6T310	242 aa		10.83	□□□□□ -0.68
LINC00461-215	ENST00000513893	SMIM7	Q9BQ49	75 aa		10.83	□□□□□ -0.68
LINC00461-215	ENST00000513893	RBX1	P62877	108 aa		10.82	□□□□□ -0.68
LINC00461-215	ENST00000513893	SRSF3	P84103	164 aa	Known RBP	10.82	□□□□□ -0.68
LINC00461-215	ENST00000513893	GATD1	Q8NB37	220 aa		10.82	□□□□□ -0.68
LINC00461-215	ENST00000513893	RPL39L	Q96EH5	51 aa	Known RBP	10.82	□□□□□ -0.68
LINC00461-215	ENST00000513893	LINC01551	Q86U37	167 aa		10.81	□□□□□ -0.68
LINC00461-215	ENST00000513893	NTN5	Q8WTR8	489 aa	Predicted RBP	10.81	□□□□□ -0.68
LINC00461-215	ENST00000513893	CHCHD7	Q9BUK0	85 aa		10.81	□□□□□ -0.68
LINC00461-215	ENST00000513893	CNFN	Q9BYD5	112 aa		10.81	□□□□□ -0.68
LINC00461-215	ENST00000513893	TRBV25-1	A0A075B6N4	114 aa		10.8	□□□□□ -0.68
LINC00461-215	ENST00000513893	ZNF727	A8MUV8	499 aa		10.8	□□□□□ -0.68
LINC00461-215	ENST00000513893		H7C1H1	209 aa		10.8	□□□□□ -0.68
LINC00461-215	ENST00000513893	GAS8-AS1	O95177	125 aa		10.8	□□□□□ -0.68
LINC00461-215	ENST00000513893	ELOB	Q15370	118 aa		10.8	□□□□□ -0.68
LINC00461-215	ENST00000513893	FAM231D	Q6ZW35	169 aa		10.8	□□□□□ -0.68
LINC00461-215	ENST00000513893	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	10.8	□□□□□ -0.68
LINC00461-215	ENST00000513893	RMI2	Q96E14	147 aa		10.8	□□□□□ -0.68
LINC00461-215	ENST00000513893	IGHV1-24	A0A0C4DH33	117 aa		10.79	□□□□□ -0.68
LINC00461-215	ENST00000513893	CRP	P02741	224 aa		10.79	□□□□□ -0.68
LINC00461-215	ENST00000513893	IQCJ	Q1A5X6	159 aa		10.79	□□□□□ -0.68
LINC00461-215	ENST00000513893	WDR73	Q6P4I2	378 aa		10.79	□□□□□ -0.68
LINC00461-215	ENST00000513893	LINC00269	Q8N2A0	174 aa		10.79	□□□□□ -0.68
LINC00461-215	ENST00000513893	GFRA4	Q9GZZ7	299 aa		10.79	□□□□□ -0.68
LINC00461-215	ENST00000513893	NIT2	Q9NQR4	276 aa		10.79	□□□□□ -0.68
LINC00461-215	ENST00000513893	HLA-DQA1	P01909	254 aa		10.78	□□□□□ -0.68
LINC00461-215	ENST00000513893	C1orf43	Q9BWL3	253 aa		10.78	□□□□□ -0.68
LINC00461-215	ENST00000513893	IGLV4-60	A0A075B6I1	120 aa		10.77	□□□□□ -0.69
LINC00461-215	ENST00000513893	IGLV10-54	A0A075B6I4	117 aa		10.77	□□□□□ -0.69
LINC00461-215	ENST00000513893	TMEM97	Q5BJF2	176 aa		10.77	□□□□□ -0.69
LINC00461-215	ENST00000513893	C20orf203	Q8NBC4	194 aa		10.77	□□□□□ -0.69
LINC00461-215	ENST00000513893		A8MWL6	223 aa		10.76	□□□□□ -0.69
LINC00461-215	ENST00000513893	EPM2A	B3EWF7	344 aa		10.76	□□□□□ -0.69
LINC00461-215	ENST00000513893		Q0VG73	95 aa		10.76	□□□□□ -0.69
LINC00461-215	ENST00000513893		Q5VSD8	79 aa		10.76	□□□□□ -0.69
LINC00461-215	ENST00000513893	TEX261	Q6UWH6	196 aa		10.76	□□□□□ -0.69
LINC00461-215	ENST00000513893	TMEM243	Q9BU79	118 aa		10.76	□□□□□ -0.69
LINC00461-215	ENST00000513893	COX11	Q9Y6N1	276 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms