RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 NTF3P20783 257 aa6.29□□□□□ -1.4
DDX41-209ENST00000508279 TWIST1Q15672 202 aa6.29□□□□□ -1.4
DDX41-209ENST00000508279 NIT1Q86X76 327 aa6.29□□□□□ -1.4
DDX41-209ENST00000508279 LYPD6BQ8NI32 183 aa6.29□□□□□ -1.4
DDX41-209ENST00000508279 SMIM7Q9BQ49 75 aa6.29□□□□□ -1.4
DDX41-209ENST00000508279 PGPEP1Q9NXJ5 209 aa6.29□□□□□ -1.4
DDX41-209ENST00000508279 KLK12Q9UKR0 248 aa6.29□□□□□ -1.4
DDX41-209ENST00000508279 KIF25-AS1Q9Y6Z4 181 aa6.29□□□□□ -1.4
DDX41-209ENST00000508279 DYNC1H1Q14204 4646 aaKnown RBP6.28□□□□□ -1.4
DDX41-209ENST00000508279 DNAH11Q96DT5 4516 aa6.28□□□□□ -1.4
DDX41-209ENST00000508279 ZNF727A8MUV8 499 aa6.28□□□□□ -1.4
DDX41-209ENST00000508279 J3QL48 77 aa6.28□□□□□ -1.4
DDX41-209ENST00000508279 SUMO4Q6EEV6 95 aa6.28□□□□□ -1.4
DDX41-209ENST00000508279 OR10G8Q8NGN5 311 aa6.28□□□□□ -1.4
DDX41-209ENST00000508279 DEFB104AQ8WTQ1 72 aa6.28□□□□□ -1.4
DDX41-209ENST00000508279 FAM210AQ96ND0 272 aa6.28□□□□□ -1.4
DDX41-209ENST00000508279 CHCHD5Q9BSY4 110 aa6.28□□□□□ -1.4
DDX41-209ENST00000508279 TM2D2Q9BX73 214 aa6.28□□□□□ -1.4
DDX41-209ENST00000508279 DPH3P1Q9H4G8 78 aa6.28□□□□□ -1.4
DDX41-209ENST00000508279 IGKV2D-24A0A075B6R9 120 aa6.27□□□□□ -1.41
DDX41-209ENST00000508279 TRBV6-8A0A0A6YYG3 113 aa6.27□□□□□ -1.41
DDX41-209ENST00000508279 TRAV8-3A0A0A6YYJ7 113 aa6.27□□□□□ -1.41
DDX41-209ENST00000508279 H7C1H1 209 aa6.27□□□□□ -1.41
DDX41-209ENST00000508279 LECT2O14960 151 aa6.27□□□□□ -1.41
DDX41-209ENST00000508279 LAGE3Q14657 143 aa6.27□□□□□ -1.41
DDX41-209ENST00000508279 C15orf54Q8N8G6 183 aa6.27□□□□□ -1.41
DDX41-209ENST00000508279 UBE2WQ96B02 151 aa6.27□□□□□ -1.41
DDX41-209ENST00000508279 PGLYRP4Q96LB8 373 aa6.27□□□□□ -1.41
DDX41-209ENST00000508279 DNAJC30Q96LL9 226 aa6.27□□□□□ -1.41
DDX41-209ENST00000508279 IGLV5-52A0A0A0MRZ9 124 aa6.26□□□□□ -1.41
DDX41-209ENST00000508279 LRCOL1A6NCL2 159 aa6.26□□□□□ -1.41
DDX41-209ENST00000508279 M0QY20 66 aa6.26□□□□□ -1.41
DDX41-209ENST00000508279 ANGP03950 147 aaKnown RBP6.26□□□□□ -1.41
DDX41-209ENST00000508279 SRP19P09132 144 aaKnown RBP6.26□□□□□ -1.41
DDX41-209ENST00000508279 CTRLP40313 264 aa6.26□□□□□ -1.41
DDX41-209ENST00000508279 GAGE6Q13070 117 aa6.26□□□□□ -1.41
DDX41-209ENST00000508279 CDPF1Q6NVV7 123 aa6.26□□□□□ -1.41
DDX41-209ENST00000508279 SMIM15Q7Z3B0 74 aa6.26□□□□□ -1.41
DDX41-209ENST00000508279 MAPKAPK5-AS1Q8N8E1 139 aa6.26□□□□□ -1.41
DDX41-209ENST00000508279 TRBV25-1A0A075B6N4 114 aa6.25□□□□□ -1.41
DDX41-209ENST00000508279 TRAV26-2A0A0B4J265 109 aa6.25□□□□□ -1.41
DDX41-209ENST00000508279 A8MWL6 223 aa6.25□□□□□ -1.41
DDX41-209ENST00000508279 CDK2AP2O75956 126 aa6.25□□□□□ -1.41
DDX41-209ENST00000508279 CRPP02741 224 aa6.25□□□□□ -1.41
DDX41-209ENST00000508279 ELOBQ15370 118 aa6.25□□□□□ -1.41
DDX41-209ENST00000508279 MPV17L2Q567V2 206 aa6.25□□□□□ -1.41
DDX41-209ENST00000508279 LCE2CQ5TA81 110 aa6.25□□□□□ -1.41
DDX41-209ENST00000508279 RASL11AQ6T310 242 aa6.25□□□□□ -1.41
DDX41-209ENST00000508279 CLPSL2Q6UWE3 100 aa6.25□□□□□ -1.41
DDX41-209ENST00000508279 TEX261Q6UWH6 196 aa6.25□□□□□ -1.41
DDX41-209ENST00000508279 NTM-AS1Q6ZSK4 140 aa6.25□□□□□ -1.41
DDX41-209ENST00000508279 LINC01551Q86U37 167 aa6.25□□□□□ -1.41
DDX41-209ENST00000508279 GTSF1Q8WW33 167 aa6.25□□□□□ -1.41
DDX41-209ENST00000508279 BAALCQ8WXS3 180 aa6.25□□□□□ -1.41
DDX41-209ENST00000508279 BORCS7Q96B45 105 aa6.25□□□□□ -1.41
DDX41-209ENST00000508279 RMI2Q96E14 147 aa6.25□□□□□ -1.41
DDX41-209ENST00000508279 HERC2O95714 4834 aa6.25□□□□□ -1.41
DDX41-209ENST00000508279 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.24□□□□□ -1.41
DDX41-209ENST00000508279 GCSHP23434 173 aa6.24□□□□□ -1.41
DDX41-209ENST00000508279 FOXA3P55318 350 aaPredicted RBP6.24□□□□□ -1.41
DDX41-209ENST00000508279 KRTAP10-1P60331 282 aa6.24□□□□□ -1.41
DDX41-209ENST00000508279 WFDC2Q14508 124 aa6.24□□□□□ -1.41
DDX41-209ENST00000508279 TMEM97Q5BJF2 176 aa6.24□□□□□ -1.41
DDX41-209ENST00000508279 WDR73Q6P4I2 378 aa6.24□□□□□ -1.41
DDX41-209ENST00000508279 ATRAIDQ6UW56 229 aa6.24□□□□□ -1.41
DDX41-209ENST00000508279 FAM231DQ6ZW35 169 aa6.24□□□□□ -1.41
DDX41-209ENST00000508279 Q8N814 137 aa6.24□□□□□ -1.41
DDX41-209ENST00000508279 Q8N976 141 aa6.24□□□□□ -1.41
DDX41-209ENST00000508279 CHCHD7Q9BUK0 85 aa6.24□□□□□ -1.41
DDX41-209ENST00000508279 IGHV1-24A0A0C4DH33 117 aa6.23□□□□□ -1.41
DDX41-209ENST00000508279 SRSF3P84103 164 aaKnown RBP6.23□□□□□ -1.41
DDX41-209ENST00000508279 Q0VG73 95 aa6.23□□□□□ -1.41
DDX41-209ENST00000508279 PEA15Q15121 130 aa6.23□□□□□ -1.41
DDX41-209ENST00000508279 ADIRFQ15847 76 aa6.23□□□□□ -1.41
DDX41-209ENST00000508279 TMEM241Q24JQ0 296 aa6.23□□□□□ -1.41
DDX41-209ENST00000508279 GATD1Q8NB37 220 aa6.23□□□□□ -1.41
DDX41-209ENST00000508279 C1orf43Q9BWL3 253 aa6.23□□□□□ -1.41
DDX41-209ENST00000508279 NIT2Q9NQR4 276 aa6.23□□□□□ -1.41
DDX41-209ENST00000508279 COX11Q9Y6N1 276 aa6.23□□□□□ -1.41
DDX41-209ENST00000508279 HIGD1CA8MV81 97 aa6.22□□□□□ -1.41
DDX41-209ENST00000508279 C9JQL5 133 aa6.22□□□□□ -1.41
DDX41-209ENST00000508279 UBE2L6O14933 153 aa6.22□□□□□ -1.41
DDX41-209ENST00000508279 HLA-DQA1P01909 254 aa6.22□□□□□ -1.41
DDX41-209ENST00000508279 PKIAP61925 76 aa6.22□□□□□ -1.41
DDX41-209ENST00000508279 HAMPP81172 84 aa6.22□□□□□ -1.41
DDX41-209ENST00000508279 RPL39LQ96EH5 51 aaKnown RBP6.22□□□□□ -1.41
DDX41-209ENST00000508279 TMEM243Q9BU79 118 aa6.22□□□□□ -1.41
DDX41-209ENST00000508279 CNFNQ9BYD5 112 aa6.22□□□□□ -1.41
DDX41-209ENST00000508279 KRTAP17-1Q9BYP8 105 aa6.22□□□□□ -1.41
DDX41-209ENST00000508279 KRTAP4-5Q9BYR2 181 aa6.22□□□□□ -1.41
DDX41-209ENST00000508279 LRP1BQ9NZR2 4599 aa6.22□□□□□ -1.41
DDX41-209ENST00000508279 NDUFS6O75380 124 aaKnown RBP6.21□□□□□ -1.42
DDX41-209ENST00000508279 AMTP48728 403 aa6.21□□□□□ -1.42
DDX41-209ENST00000508279 RPL23P62829 140 aaKnown RBP6.21□□□□□ -1.42
DDX41-209ENST00000508279 RBX1P62877 108 aa6.21□□□□□ -1.42
DDX41-209ENST00000508279 COTL1Q14019 142 aa6.21□□□□□ -1.42
DDX41-209ENST00000508279 IQCJQ1A5X6 159 aa6.21□□□□□ -1.42
DDX41-209ENST00000508279 CT83Q5H943 113 aa6.21□□□□□ -1.42
DDX41-209ENST00000508279 ENHOQ6UWT2 76 aa6.21□□□□□ -1.42
DDX41-209ENST00000508279 LINC00269Q8N2A0 174 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms