RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 PARP14Q460N5 1801 aa0.32□□□□□ -2.36
SMN2-208ENST00000508258 GVQW2A0A096LPI5 108 aaPredicted RBP0.32□□□□□ -2.36
SMN2-208ENST00000508258 TRBV7-1A0A0A6YYK4 115 aa0.32□□□□□ -2.36
SMN2-208ENST00000508258 SPAARA0A1B0GVQ0 90 aa0.32□□□□□ -2.36
SMN2-208ENST00000508258 A6NIN4 97 aa0.32□□□□□ -2.36
SMN2-208ENST00000508258 DLEU1O43261 78 aa0.32□□□□□ -2.36
SMN2-208ENST00000508258 C12orf73Q69YU5 71 aa0.32□□□□□ -2.36
SMN2-208ENST00000508258 SPTSSBQ8NFR3 76 aa0.32□□□□□ -2.36
SMN2-208ENST00000508258 BPESC1Q9GZL8 116 aa0.32□□□□□ -2.36
SMN2-208ENST00000508258 V9GYV3 84 aa0.32□□□□□ -2.36
SMN2-208ENST00000508258 A2ML1A8K2U0 1454 aa0.32□□□□□ -2.36
SMN2-208ENST00000508258 KCPQ6ZWJ8 1503 aa0.32□□□□□ -2.36
SMN2-208ENST00000508258 PEG3Q9GZU2 1588 aa0.32□□□□□ -2.36
SMN2-208ENST00000508258 CUL7Q14999 1698 aa0.31□□□□□ -2.36
SMN2-208ENST00000508258 MYH7P12883 1935 aa0.31□□□□□ -2.36
SMN2-208ENST00000508258 APOC4-APOC2K7ER74 178 aa0.31□□□□□ -2.36
SMN2-208ENST00000508258 SIX6O95475 246 aa0.31□□□□□ -2.36
SMN2-208ENST00000508258 EDDM3BP56851 147 aa0.31□□□□□ -2.36
SMN2-208ENST00000508258 SPINK7P58062 85 aa0.31□□□□□ -2.36
SMN2-208ENST00000508258 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.31□□□□□ -2.36
SMN2-208ENST00000508258 SMIM11BQ8TCY0 68 aa0.31□□□□□ -2.36
SMN2-208ENST00000508258 PP6455Q8WZ26 134 aa0.31□□□□□ -2.36
SMN2-208ENST00000508258 C2orf88Q9BSF0 95 aa0.31□□□□□ -2.36
SMN2-208ENST00000508258 PLAC8Q9NZF1 115 aa0.31□□□□□ -2.36
SMN2-208ENST00000508258 SPAG17Q6Q759 2223 aa0.31□□□□□ -2.36
SMN2-208ENST00000508258 ARFGEF1Q9Y6D6 1849 aa0.31□□□□□ -2.36
SMN2-208ENST00000508258 ZDBF2Q9HCK1 2354 aa0.31□□□□□ -2.36
SMN2-208ENST00000508258 TENM3Q9P273 2699 aa0.31□□□□□ -2.36
SMN2-208ENST00000508258 ABCA4P78363 2273 aa0.3□□□□□ -2.36
SMN2-208ENST00000508258 WDR7Q9Y4E6 1490 aa0.3□□□□□ -2.36
SMN2-208ENST00000508258 LINC00587B1AMM8 73 aa0.3□□□□□ -2.36
SMN2-208ENST00000508258 F2Z2F3 143 aa0.3□□□□□ -2.36
SMN2-208ENST00000508258 RBM3P98179 157 aaKnown RBP0.3□□□□□ -2.36
SMN2-208ENST00000508258 INSL4Q14641 139 aa0.3□□□□□ -2.36
SMN2-208ENST00000508258 Q56UQ5 140 aa0.3□□□□□ -2.36
SMN2-208ENST00000508258 WFDC6Q9BQY6 131 aa0.3□□□□□ -2.36
SMN2-208ENST00000508258 LINC00312Q9Y6C7 94 aa0.3□□□□□ -2.36
SMN2-208ENST00000508258 EIF4G3O43432 1585 aaKnown RBP0.3□□□□□ -2.36
SMN2-208ENST00000508258 LAMC3Q9Y6N6 1575 aa0.3□□□□□ -2.36
SMN2-208ENST00000508258 SHROOM2Q13796 1616 aa0.3□□□□□ -2.36
SMN2-208ENST00000508258 MEGF8Q7Z7M0 2845 aa0.3□□□□□ -2.36
SMN2-208ENST00000508258 ARAP2Q8WZ64 1704 aa0.3□□□□□ -2.36
SMN2-208ENST00000508258 SMG6Q86US8 1419 aaKnown RBP0.3□□□□□ -2.36
SMN2-208ENST00000508258 MYOM2P54296 1465 aa0.29□□□□□ -2.36
SMN2-208ENST00000508258 GOLGA3Q08378 1498 aa0.29□□□□□ -2.36
SMN2-208ENST00000508258 ZNF462Q96JM2 2506 aa0.29□□□□□ -2.36
SMN2-208ENST00000508258 TRGV1A0A0A0MS02 117 aa0.29□□□□□ -2.36
SMN2-208ENST00000508258 TRAV13-2A0A0B4J235 113 aa0.29□□□□□ -2.36
SMN2-208ENST00000508258 PIGBOS1A0A0B4J2F0 54 aa0.29□□□□□ -2.36
SMN2-208ENST00000508258 MIF4GDA9UHW6 222 aaKnown RBP0.29□□□□□ -2.36
SMN2-208ENST00000508258 HCG22E2RYF7 251 aa0.29□□□□□ -2.36
SMN2-208ENST00000508258 TNFP01375 233 aa0.29□□□□□ -2.36
SMN2-208ENST00000508258 PRH1P02810 166 aa0.29□□□□□ -2.36
SMN2-208ENST00000508258 KRTAP2-3P0C7H8 128 aa0.29□□□□□ -2.36
SMN2-208ENST00000508258 AKAIN1P0CW23 69 aa0.29□□□□□ -2.36
SMN2-208ENST00000508258 ACYP2P14621 99 aa0.29□□□□□ -2.36
SMN2-208ENST00000508258 VMO1Q7Z5L0 202 aa0.29□□□□□ -2.36
SMN2-208ENST00000508258 PRR15LQ9BU68 103 aa0.29□□□□□ -2.36
SMN2-208ENST00000508258 KRTAP2-4Q9BYR9 128 aa0.29□□□□□ -2.36
SMN2-208ENST00000508258 KRTAP2-1Q9BYU5 128 aa0.29□□□□□ -2.36
SMN2-208ENST00000508258 SCN3BQ9NY72 215 aa0.29□□□□□ -2.36
SMN2-208ENST00000508258 PRDM2Q13029 1718 aa0.29□□□□□ -2.36
SMN2-208ENST00000508258 PATJQ8NI35 1801 aa0.29□□□□□ -2.36
SMN2-208ENST00000508258 CPSF1Q10570 1443 aaKnown RBP0.29□□□□□ -2.36
SMN2-208ENST00000508258 ZMYM4Q5VZL5 1548 aa0.28□□□□□ -2.36
SMN2-208ENST00000508258 ROBO1Q9Y6N7 1651 aa0.28□□□□□ -2.36
SMN2-208ENST00000508258 IFT172Q9UG01 1749 aa0.28□□□□□ -2.36
SMN2-208ENST00000508258 TMEM14DPA8MWL7 114 aa0.28□□□□□ -2.36
SMN2-208ENST00000508258 APOC2P02655 101 aa0.28□□□□□ -2.36
SMN2-208ENST00000508258 CATR1Q13166 79 aa0.28□□□□□ -2.36
SMN2-208ENST00000508258 Q5VV11 94 aa0.28□□□□□ -2.36
SMN2-208ENST00000508258 Q6ZRX8 168 aa0.28□□□□□ -2.36
SMN2-208ENST00000508258 PPP3R2Q96LZ3 170 aa0.28□□□□□ -2.36
SMN2-208ENST00000508258 SCP2D1Q9UJQ7 156 aa0.28□□□□□ -2.36
SMN2-208ENST00000508258 DOCK1Q14185 1865 aa0.28□□□□□ -2.36
SMN2-208ENST00000508258 FRAS1Q86XX4 4008 aa0.28□□□□□ -2.36
SMN2-208ENST00000508258 MYH9P35579 1960 aaKnown RBP0.28□□□□□ -2.36
SMN2-208ENST00000508258 PPIP5K1Q6PFW1 1433 aa0.28□□□□□ -2.37
SMN2-208ENST00000508258 UNC13BO14795 1591 aa0.28□□□□□ -2.37
SMN2-208ENST00000508258 TRAV1-2A0A0B4J238 106 aa0.27□□□□□ -2.37
SMN2-208ENST00000508258 G3V318 75 aa0.27□□□□□ -2.37
SMN2-208ENST00000508258 CORTO00230 105 aa0.27□□□□□ -2.37
SMN2-208ENST00000508258 IFNGP01579 166 aa0.27□□□□□ -2.37
SMN2-208ENST00000508258 CCL18P55774 89 aa0.27□□□□□ -2.37
SMN2-208ENST00000508258 C8orf59Q8N0T1 100 aaPredicted RBP0.27□□□□□ -2.37
SMN2-208ENST00000508258 TMEM203Q969S6 136 aa0.27□□□□□ -2.37
SMN2-208ENST00000508258 SMR3AQ99954 134 aa0.27□□□□□ -2.37
SMN2-208ENST00000508258 SPANXDQ9BXN6 97 aa0.27□□□□□ -2.37
SMN2-208ENST00000508258 PROK2Q9HC23 129 aa0.27□□□□□ -2.37
SMN2-208ENST00000508258 KTN1Q86UP2 1357 aaKnown RBP0.27□□□□□ -2.37
SMN2-208ENST00000508258 MRC1P22897 1456 aa0.27□□□□□ -2.37
SMN2-208ENST00000508258 FAM135AQ9P2D6 1515 aa0.27□□□□□ -2.37
SMN2-208ENST00000508258 RIMS1Q86UR5 1692 aaKnown RBP0.27□□□□□ -2.37
SMN2-208ENST00000508258 KNTC1P50748 2209 aa0.26□□□□□ -2.37
SMN2-208ENST00000508258 KIAA0100Q14667 2235 aaKnown RBP0.26□□□□□ -2.37
SMN2-208ENST00000508258 OOSP1A8MZH6 123 aa0.26□□□□□ -2.37
SMN2-208ENST00000508258 F6UZH7 168 aa0.26□□□□□ -2.37
SMN2-208ENST00000508258 TPPP2P59282 170 aa0.26□□□□□ -2.37
SMN2-208ENST00000508258 C10orf128Q5T292 105 aa0.26□□□□□ -2.37
SMN2-208ENST00000508258 MRPL54Q6P161 138 aaKnown RBP0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 352.7 ms