RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 HAMPP81172 84 aa6.25□□□□□ -1.41
UBE2D3-223ENST00000508249 TMEM97Q5BJF2 176 aa6.25□□□□□ -1.41
UBE2D3-223ENST00000508249 OR10G8Q8NGN5 311 aa6.25□□□□□ -1.41
UBE2D3-223ENST00000508249 CNFNQ9BYD5 112 aa6.25□□□□□ -1.41
UBE2D3-223ENST00000508249 SAMD10Q9BYL1 202 aa6.25□□□□□ -1.41
UBE2D3-223ENST00000508249 A0A087WWL8 130 aa6.24□□□□□ -1.41
UBE2D3-223ENST00000508249 LOC100131303A0A0U1RQF7 123 aa6.24□□□□□ -1.41
UBE2D3-223ENST00000508249 FAM231BA6NCW3 169 aa6.24□□□□□ -1.41
UBE2D3-223ENST00000508249 J3QL48 77 aa6.24□□□□□ -1.41
UBE2D3-223ENST00000508249 GATCO43716 136 aaKnown RBP6.24□□□□□ -1.41
UBE2D3-223ENST00000508249 CEBPGP53567 150 aa6.24□□□□□ -1.41
UBE2D3-223ENST00000508249 PKIAP61925 76 aa6.24□□□□□ -1.41
UBE2D3-223ENST00000508249 ZNF56Q15929 161 aa6.24□□□□□ -1.41
UBE2D3-223ENST00000508249 LINC01556Q5JQF7 62 aa6.24□□□□□ -1.41
UBE2D3-223ENST00000508249 JPT2Q9H910 190 aa6.24□□□□□ -1.41
UBE2D3-223ENST00000508249 TRBV7-3A0A075B6L6 115 aa6.23□□□□□ -1.41
UBE2D3-223ENST00000508249 IGHV3-38A0A0C4DH36 116 aa6.23□□□□□ -1.41
UBE2D3-223ENST00000508249 GAGE12JA6NER3 117 aa6.23□□□□□ -1.41
UBE2D3-223ENST00000508249 K7EN84 100 aa6.23□□□□□ -1.41
UBE2D3-223ENST00000508249 ERVFC1-1P60608 527 aa6.23□□□□□ -1.41
UBE2D3-223ENST00000508249 GAGE1Q13065 139 aa6.23□□□□□ -1.41
UBE2D3-223ENST00000508249 GAGE4Q13068 117 aa6.23□□□□□ -1.41
UBE2D3-223ENST00000508249 GAGE5Q13069 117 aa6.23□□□□□ -1.41
UBE2D3-223ENST00000508249 GAGE13Q4V321 117 aa6.23□□□□□ -1.41
UBE2D3-223ENST00000508249 OR10J3Q5JRS4 329 aa6.23□□□□□ -1.41
UBE2D3-223ENST00000508249 Q6ZSN1 163 aa6.23□□□□□ -1.41
UBE2D3-223ENST00000508249 SMIM15Q7Z3B0 74 aa6.23□□□□□ -1.41
UBE2D3-223ENST00000508249 LINC01551Q86U37 167 aa6.23□□□□□ -1.41
UBE2D3-223ENST00000508249 C14orf178Q8N769 122 aaPredicted RBP6.23□□□□□ -1.41
UBE2D3-223ENST00000508249 C15orf54Q8N8G6 183 aa6.23□□□□□ -1.41
UBE2D3-223ENST00000508249 BORCS7Q96B45 105 aa6.23□□□□□ -1.41
UBE2D3-223ENST00000508249 DNAJC30Q96LL9 226 aa6.23□□□□□ -1.41
UBE2D3-223ENST00000508249 CHCHD7Q9BUK0 85 aa6.23□□□□□ -1.41
UBE2D3-223ENST00000508249 TPPP3Q9BW30 176 aa6.23□□□□□ -1.41
UBE2D3-223ENST00000508249 GFRA4Q9GZZ7 299 aa6.23□□□□□ -1.41
UBE2D3-223ENST00000508249 DPH3P1Q9H4G8 78 aa6.23□□□□□ -1.41
UBE2D3-223ENST00000508249 OSTCQ9NRP0 149 aa6.23□□□□□ -1.41
UBE2D3-223ENST00000508249 TNXBP22105 4242 aa6.22□□□□□ -1.41
UBE2D3-223ENST00000508249 F5H697 171 aa6.22□□□□□ -1.41
UBE2D3-223ENST00000508249 GZMBP10144 247 aa6.22□□□□□ -1.41
UBE2D3-223ENST00000508249 FOXA3P55318 350 aaPredicted RBP6.22□□□□□ -1.41
UBE2D3-223ENST00000508249 LINC00315P59091 139 aa6.22□□□□□ -1.41
UBE2D3-223ENST00000508249 TMEM241Q24JQ0 296 aa6.22□□□□□ -1.41
UBE2D3-223ENST00000508249 LYZL1Q6UWQ5 148 aa6.22□□□□□ -1.41
UBE2D3-223ENST00000508249 DAZ4Q86SG3 579 aaKnown RBP6.22□□□□□ -1.41
UBE2D3-223ENST00000508249 WFDC10BQ8IUB3 73 aa6.22□□□□□ -1.41
UBE2D3-223ENST00000508249 RNASE7Q9H1E1 156 aaKnown RBP6.22□□□□□ -1.41
UBE2D3-223ENST00000508249 DAZ3Q9NR90 486 aaKnown RBP6.22□□□□□ -1.41
UBE2D3-223ENST00000508249 NAT8Q9UHE5 227 aa6.22□□□□□ -1.41
UBE2D3-223ENST00000508249 KIF25-AS1Q9Y6Z4 181 aa6.22□□□□□ -1.41
UBE2D3-223ENST00000508249 UBE2D3P61077 147 aa6.21□□□□□ -1.42
UBE2D3-223ENST00000508249 UBE2D2P62837 147 aa6.21□□□□□ -1.42
UBE2D3-223ENST00000508249 LAGE3Q14657 143 aa6.21□□□□□ -1.42
UBE2D3-223ENST00000508249 CDPF1Q6NVV7 123 aa6.21□□□□□ -1.42
UBE2D3-223ENST00000508249 KCNIP4Q6PIL6 250 aa6.21□□□□□ -1.42
UBE2D3-223ENST00000508249 TSKUQ8WUA8 353 aa6.21□□□□□ -1.42
UBE2D3-223ENST00000508249 NTF3P20783 257 aa6.2□□□□□ -1.42
UBE2D3-223ENST00000508249 ELOBQ15370 118 aa6.2□□□□□ -1.42
UBE2D3-223ENST00000508249 TWIST1Q15672 202 aa6.2□□□□□ -1.42
UBE2D3-223ENST00000508249 SERTAD4-AS1Q5TG53 156 aa6.2□□□□□ -1.42
UBE2D3-223ENST00000508249 NEXN-AS1Q8NBZ9 246 aa6.2□□□□□ -1.42
UBE2D3-223ENST00000508249 PGPEP1Q9NXJ5 209 aa6.2□□□□□ -1.42
UBE2D3-223ENST00000508249 MSRB1Q9NZV6 116 aa6.2□□□□□ -1.42
UBE2D3-223ENST00000508249 MUC21A0A0G2JKD1 596 aa6.19□□□□□ -1.42
UBE2D3-223ENST00000508249 MUC21A0A140T8X8 626 aa6.19□□□□□ -1.42
UBE2D3-223ENST00000508249 IBA57-AS1B1ANH7 110 aa6.19□□□□□ -1.42
UBE2D3-223ENST00000508249 MGPP08493 103 aa6.19□□□□□ -1.42
UBE2D3-223ENST00000508249 RPL23P62829 140 aaKnown RBP6.19□□□□□ -1.42
UBE2D3-223ENST00000508249 CLLU1Q5K131 121 aa6.19□□□□□ -1.42
UBE2D3-223ENST00000508249 RASL11AQ6T310 242 aa6.19□□□□□ -1.42
UBE2D3-223ENST00000508249 ISOC2Q96AB3 205 aa6.19□□□□□ -1.42
UBE2D3-223ENST00000508249 TNFRSF18Q9Y5U5 241 aa6.19□□□□□ -1.42
UBE2D3-223ENST00000508249 URGCP-MRPS24S4R325 110 aa6.19□□□□□ -1.42
UBE2D3-223ENST00000508249 TRAV8-3A0A0A6YYJ7 113 aa6.18□□□□□ -1.42
UBE2D3-223ENST00000508249 A0A1B0GUT8 65 aa6.18□□□□□ -1.42
UBE2D3-223ENST00000508249 HIGD1CA8MV81 97 aa6.18□□□□□ -1.42
UBE2D3-223ENST00000508249 M0QY20 66 aa6.18□□□□□ -1.42
UBE2D3-223ENST00000508249 PNRC1Q12796 327 aaPredicted RBP6.18□□□□□ -1.42
UBE2D3-223ENST00000508249 ADIRFQ15847 76 aa6.18□□□□□ -1.42
UBE2D3-223ENST00000508249 SUMO4Q6EEV6 95 aa6.18□□□□□ -1.42
UBE2D3-223ENST00000508249 GTSF1Q8WW33 167 aa6.18□□□□□ -1.42
UBE2D3-223ENST00000508249 TM2D2Q9BX73 214 aa6.18□□□□□ -1.42
UBE2D3-223ENST00000508249 COX11Q9Y6N1 276 aa6.18□□□□□ -1.42
UBE2D3-223ENST00000508249 A0A087WX48 190 aa6.17□□□□□ -1.42
UBE2D3-223ENST00000508249 TRBV6-8A0A0A6YYG3 113 aa6.17□□□□□ -1.42
UBE2D3-223ENST00000508249 A0A1B0GW15 77 aa6.17□□□□□ -1.42
UBE2D3-223ENST00000508249 FAM229AH3BQW9 127 aa6.17□□□□□ -1.42
UBE2D3-223ENST00000508249 PPP1R2P9O14990 202 aa6.17□□□□□ -1.42
UBE2D3-223ENST00000508249 SSTP61278 116 aa6.17□□□□□ -1.42
UBE2D3-223ENST00000508249 RIGQ13278 110 aa6.17□□□□□ -1.42
UBE2D3-223ENST00000508249 NIT1Q86X76 327 aa6.17□□□□□ -1.42
UBE2D3-223ENST00000508249 RMI2Q96E14 147 aa6.17□□□□□ -1.42
UBE2D3-223ENST00000508249 PGLYRP4Q96LB8 373 aa6.17□□□□□ -1.42
UBE2D3-223ENST00000508249 TMEM191AQ9H0A3 160 aa6.17□□□□□ -1.42
UBE2D3-223ENST00000508249 NIT2Q9NQR4 276 aa6.17□□□□□ -1.42
UBE2D3-223ENST00000508249 NAT8BQ9UHF3 227 aa6.17□□□□□ -1.42
UBE2D3-223ENST00000508249 PLA2G2DQ9UNK4 145 aa6.17□□□□□ -1.42
UBE2D3-223ENST00000508249 V9GYV3 84 aa6.17□□□□□ -1.42
UBE2D3-223ENST00000508249 TRBV25-1A0A075B6N4 114 aa6.16□□□□□ -1.42
UBE2D3-223ENST00000508249 A0A087WTM6 91 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms