RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 TRBV7-3A0A075B6L6 115 aa8.89□□□□□ -0.99
TCOF1-209ENST00000506630 A8MWL6 223 aa8.89□□□□□ -0.99
TCOF1-209ENST00000506630 C9JQL5 133 aa8.89□□□□□ -0.99
TCOF1-209ENST00000506630 BTF3P20290 206 aaKnown RBP8.89□□□□□ -0.99
TCOF1-209ENST00000506630 NTF3P20783 257 aa8.89□□□□□ -0.99
TCOF1-209ENST00000506630 UBE2D3P61077 147 aa8.89□□□□□ -0.99
TCOF1-209ENST00000506630 RAB14P61106 215 aa8.89□□□□□ -0.99
TCOF1-209ENST00000506630 UBE2D2P62837 147 aa8.89□□□□□ -0.99
TCOF1-209ENST00000506630 TWIST1Q15672 202 aa8.89□□□□□ -0.99
TCOF1-209ENST00000506630 CT83Q5H943 113 aa8.89□□□□□ -0.99
TCOF1-209ENST00000506630 LINC01556Q5JQF7 62 aa8.89□□□□□ -0.99
TCOF1-209ENST00000506630 C10orf126Q8N4M7 172 aa8.89□□□□□ -0.99
TCOF1-209ENST00000506630 GTSF1Q8WW33 167 aa8.89□□□□□ -0.99
TCOF1-209ENST00000506630 A0A087WWC5 75 aa8.88□□□□□ -0.99
TCOF1-209ENST00000506630 K7EP13 123 aa8.88□□□□□ -0.99
TCOF1-209ENST00000506630 IGHV3-30P01768 117 aa8.88□□□□□ -0.99
TCOF1-209ENST00000506630 IGHV3-33P01772 117 aa8.88□□□□□ -0.99
TCOF1-209ENST00000506630 IGHV3-30-3P0DP02 117 aa8.88□□□□□ -0.99
TCOF1-209ENST00000506630 IGHV3-30-5P0DP03 117 aa8.88□□□□□ -0.99
TCOF1-209ENST00000506630 ADIRFQ15847 76 aa8.88□□□□□ -0.99
TCOF1-209ENST00000506630 TMEM241Q24JQ0 296 aa8.88□□□□□ -0.99
TCOF1-209ENST00000506630 WDR73Q6P4I2 378 aa8.88□□□□□ -0.99
TCOF1-209ENST00000506630 OR10G8Q8NGN5 311 aa8.88□□□□□ -0.99
TCOF1-209ENST00000506630 CNFNQ9BYD5 112 aa8.88□□□□□ -0.99
TCOF1-209ENST00000506630 DPH3P1Q9H4G8 78 aa8.88□□□□□ -0.99
TCOF1-209ENST00000506630 SMDT1Q9H4I9 107 aa8.88□□□□□ -0.99
TCOF1-209ENST00000506630 RPL23P62829 140 aaKnown RBP8.87□□□□□ -0.99
TCOF1-209ENST00000506630 SUMO4Q6EEV6 95 aa8.87□□□□□ -0.99
TCOF1-209ENST00000506630 C15orf54Q8N8G6 183 aa8.87□□□□□ -0.99
TCOF1-209ENST00000506630 PGLYRP4Q96LB8 373 aa8.87□□□□□ -0.99
TCOF1-209ENST00000506630 OSTCQ9NRP0 149 aa8.87□□□□□ -0.99
TCOF1-209ENST00000506630 NAT8Q9UHE5 227 aa8.87□□□□□ -0.99
TCOF1-209ENST00000506630 TNFRSF18Q9Y5U5 241 aa8.87□□□□□ -0.99
TCOF1-209ENST00000506630 APOBP04114 4563 aaKnown RBP8.87□□□□□ -0.99
TCOF1-209ENST00000506630 H7C1H1 209 aa8.86□□□□□ -0.99
TCOF1-209ENST00000506630 NFE4Q86UQ8 179 aa8.86□□□□□ -0.99
TCOF1-209ENST00000506630 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.86□□□□□ -0.99
TCOF1-209ENST00000506630 ISOC2Q96AB3 205 aa8.86□□□□□ -0.99
TCOF1-209ENST00000506630 BORCS7Q96B45 105 aa8.86□□□□□ -0.99
TCOF1-209ENST00000506630 HIGD1CA8MV81 97 aa8.85□□□□□ -0.99
TCOF1-209ENST00000506630 EREGO14944 169 aa8.85□□□□□ -0.99
TCOF1-209ENST00000506630 Q6ZRN7 208 aaPredicted RBP8.85□□□□□ -0.99
TCOF1-209ENST00000506630 SMIM15Q7Z3B0 74 aa8.85□□□□□ -0.99
TCOF1-209ENST00000506630 SPATA12Q7Z6I5 190 aa8.85□□□□□ -0.99
TCOF1-209ENST00000506630 TSKUQ8WUA8 353 aa8.85□□□□□ -0.99
TCOF1-209ENST00000506630 M0QY20 66 aa8.84□□□□□ -0.99
TCOF1-209ENST00000506630 Q8N3U1 123 aa8.84□□□□□ -0.99
TCOF1-209ENST00000506630 DNAJC30Q96LL9 226 aa8.84□□□□□ -0.99
TCOF1-209ENST00000506630 GFRA4Q9GZZ7 299 aa8.84□□□□□ -0.99
TCOF1-209ENST00000506630 Q9HAA7 133 aa8.84□□□□□ -0.99
TCOF1-209ENST00000506630 URGCP-MRPS24S4R325 110 aa8.84□□□□□ -0.99
TCOF1-209ENST00000506630 V9GYV3 84 aa8.84□□□□□ -0.99
TCOF1-209ENST00000506630 FOXA3P55318 350 aaPredicted RBP8.83□□□□□ -1
TCOF1-209ENST00000506630 RASL11AQ6T310 242 aa8.83□□□□□ -1
TCOF1-209ENST00000506630 DAZ4Q86SG3 579 aaKnown RBP8.83□□□□□ -1
TCOF1-209ENST00000506630 DAZ3Q9NR90 486 aaKnown RBP8.83□□□□□ -1
TCOF1-209ENST00000506630 A0A1B0GUT8 65 aa8.82□□□□□ -1
TCOF1-209ENST00000506630 IBA57-AS1B1ANH7 110 aa8.82□□□□□ -1
TCOF1-209ENST00000506630 EPM2AB3EWF7 344 aa8.82□□□□□ -1
TCOF1-209ENST00000506630 CLLU1Q5K131 121 aa8.82□□□□□ -1
TCOF1-209ENST00000506630 KCNIP4Q6PIL6 250 aa8.82□□□□□ -1
TCOF1-209ENST00000506630 NIT1Q86X76 327 aa8.82□□□□□ -1
TCOF1-209ENST00000506630 TRBV6-8A0A0A6YYG3 113 aa8.81□□□□□ -1
TCOF1-209ENST00000506630 TRAV26-2A0A0B4J265 109 aa8.81□□□□□ -1
TCOF1-209ENST00000506630 FAM231BA6NCW3 169 aa8.81□□□□□ -1
TCOF1-209ENST00000506630 PSCAO43653 123 aa8.81□□□□□ -1
TCOF1-209ENST00000506630 IFITM2Q01629 132 aa8.81□□□□□ -1
TCOF1-209ENST00000506630 LAGE3Q14657 143 aa8.81□□□□□ -1
TCOF1-209ENST00000506630 TMEM97Q5BJF2 176 aa8.81□□□□□ -1
TCOF1-209ENST00000506630 A0A087WX48 190 aa8.8□□□□□ -1
TCOF1-209ENST00000506630 TMEM262E9PQX1 116 aa8.8□□□□□ -1
TCOF1-209ENST00000506630 GATD1Q8NB37 220 aa8.8□□□□□ -1
TCOF1-209ENST00000506630 NUP35Q8NFH5 326 aa8.8□□□□□ -1
TCOF1-209ENST00000506630 CHCHD5Q9BSY4 110 aa8.8□□□□□ -1
TCOF1-209ENST00000506630 NIT2Q9NQR4 276 aa8.8□□□□□ -1
TCOF1-209ENST00000506630 NAT8BQ9UHF3 227 aa8.8□□□□□ -1
TCOF1-209ENST00000506630 TRBV25-1A0A075B6N4 114 aa8.79□□□□□ -1
TCOF1-209ENST00000506630 INAFM2P0DMQ5 153 aa8.79□□□□□ -1
TCOF1-209ENST00000506630 RIGQ13278 110 aa8.79□□□□□ -1
TCOF1-209ENST00000506630 RPL39LQ96EH5 51 aaKnown RBP8.79□□□□□ -1
TCOF1-209ENST00000506630 CHCHD7Q9BUK0 85 aa8.79□□□□□ -1
TCOF1-209ENST00000506630 FUSP35637 526 aaKnown RBP eCLIP8.78□□□□□ -1
TCOF1-209ENST00000506630 NTM-AS1Q6ZSK4 140 aa8.78□□□□□ -1
TCOF1-209ENST00000506630 KLK12Q9UKR0 248 aa8.78□□□□□ -1
TCOF1-209ENST00000506630 TRAV8-3A0A0A6YYJ7 113 aa8.77□□□□□ -1.01
TCOF1-209ENST00000506630 IGHV1-24A0A0C4DH33 117 aa8.77□□□□□ -1.01
TCOF1-209ENST00000506630 SMIM27A0A1W2PRY6 76 aa8.77□□□□□ -1.01
TCOF1-209ENST00000506630 KRTAP10-2P60368 255 aa8.77□□□□□ -1.01
TCOF1-209ENST00000506630 PKIAP61925 76 aa8.77□□□□□ -1.01
TCOF1-209ENST00000506630 ELOBQ15370 118 aa8.77□□□□□ -1.01
TCOF1-209ENST00000506630 MPV17L2Q567V2 206 aa8.77□□□□□ -1.01
TCOF1-209ENST00000506630 DEFB104AQ8WTQ1 72 aa8.77□□□□□ -1.01
TCOF1-209ENST00000506630 FRZBQ92765 325 aa8.77□□□□□ -1.01
TCOF1-209ENST00000506630 TMEM191AQ9H0A3 160 aa8.77□□□□□ -1.01
TCOF1-209ENST00000506630 DMBT1Q9UGM3 2413 aaPredicted RBP8.77□□□□□ -1.01
TCOF1-209ENST00000506630 A0A087WTM6 91 aa8.76□□□□□ -1.01
TCOF1-209ENST00000506630 GAGE6Q13070 117 aa8.76□□□□□ -1.01
TCOF1-209ENST00000506630 COTL1Q14019 142 aa8.76□□□□□ -1.01
TCOF1-209ENST00000506630 IQCJQ1A5X6 159 aa8.76□□□□□ -1.01
TCOF1-209ENST00000506630 AMN1Q8IY45 258 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms