RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 OSTCQ9NRP0 149 aa12.01□□□□□ -0.49
SMN1-204ENST00000506163 A8MWL6 223 aa12□□□□□ -0.49
SMN1-204ENST00000506163 TWIST1Q15672 202 aa12□□□□□ -0.49
SMN1-204ENST00000506163 FAM74A3Q4VXF1 159 aa12□□□□□ -0.49
SMN1-204ENST00000506163 CT83Q5H943 113 aa12□□□□□ -0.49
SMN1-204ENST00000506163 SUMO4Q6EEV6 95 aa12□□□□□ -0.49
SMN1-204ENST00000506163 ISOC2Q96AB3 205 aa12□□□□□ -0.49
SMN1-204ENST00000506163 PGLYRP4Q96LB8 373 aa12□□□□□ -0.49
SMN1-204ENST00000506163 V9GYV3 84 aa12□□□□□ -0.49
SMN1-204ENST00000506163 A0A087WWC5 75 aa11.99□□□□□ -0.49
SMN1-204ENST00000506163 IFITM2Q01629 132 aa11.99□□□□□ -0.49
SMN1-204ENST00000506163 SMDT1Q9H4I9 107 aa11.99□□□□□ -0.49
SMN1-204ENST00000506163 IBA57-AS1B1ANH7 110 aa11.98□□□□□ -0.49
SMN1-204ENST00000506163 TRGC1P0CF51 173 aa11.98□□□□□ -0.49
SMN1-204ENST00000506163 C10orf126Q8N4M7 172 aa11.98□□□□□ -0.49
SMN1-204ENST00000506163 TSKUQ8WUA8 353 aa11.98□□□□□ -0.49
SMN1-204ENST00000506163 DPH3P1Q9H4G8 78 aa11.98□□□□□ -0.49
SMN1-204ENST00000506163 KIAA1109Q2LD37 5005 aa11.98□□□□□ -0.49
SMN1-204ENST00000506163 NTM-AS1Q6ZSK4 140 aa11.97□□□□□ -0.49
SMN1-204ENST00000506163 NIT1Q86X76 327 aa11.97□□□□□ -0.49
SMN1-204ENST00000506163 NAT8Q9UHE5 227 aa11.97□□□□□ -0.49
SMN1-204ENST00000506163 DAZ4Q86SG3 579 aaKnown RBP11.96□□□□□ -0.49
SMN1-204ENST00000506163 DAZ3Q9NR90 486 aaKnown RBP11.96□□□□□ -0.49
SMN1-204ENST00000506163 HIGD1CA8MV81 97 aa11.95□□□□□ -0.5
SMN1-204ENST00000506163 KRTAP10-2P60368 255 aa11.95□□□□□ -0.5
SMN1-204ENST00000506163 ADIRFQ15847 76 aa11.95□□□□□ -0.5
SMN1-204ENST00000506163 DNAH5Q8TE73 4624 aa11.95□□□□□ -0.5
SMN1-204ENST00000506163 TRBV6-8A0A0A6YYG3 113 aa11.94□□□□□ -0.5
SMN1-204ENST00000506163 TRAV26-2A0A0B4J265 109 aa11.94□□□□□ -0.5
SMN1-204ENST00000506163 NFE4Q86UQ8 179 aa11.94□□□□□ -0.5
SMN1-204ENST00000506163 GATD1Q8NB37 220 aa11.94□□□□□ -0.5
SMN1-204ENST00000506163 DNAJC30Q96LL9 226 aa11.94□□□□□ -0.5
SMN1-204ENST00000506163 GFRA4Q9GZZ7 299 aa11.94□□□□□ -0.5
SMN1-204ENST00000506163 LRP1BQ9NZR2 4599 aa11.94□□□□□ -0.5
SMN1-204ENST00000506163 RASL11AQ6T310 242 aa11.94□□□□□ -0.5
SMN1-204ENST00000506163 SPATA12Q7Z6I5 190 aa11.94□□□□□ -0.5
SMN1-204ENST00000506163 Q9HAA7 133 aa11.94□□□□□ -0.5
SMN1-204ENST00000506163 FAM231BA6NCW3 169 aa11.93□□□□□ -0.5
SMN1-204ENST00000506163 H7C1H1 209 aa11.93□□□□□ -0.5
SMN1-204ENST00000506163 FUSP35637 526 aaKnown RBP eCLIP11.93□□□□□ -0.5
SMN1-204ENST00000506163 CLLU1Q5K131 121 aa11.93□□□□□ -0.5
SMN1-204ENST00000506163 C15orf54Q8N8G6 183 aa11.93□□□□□ -0.5
SMN1-204ENST00000506163 GAS8-AS1O95177 125 aa11.92□□□□□ -0.5
SMN1-204ENST00000506163 RAB14P61106 215 aa11.92□□□□□ -0.5
SMN1-204ENST00000506163 NUP35Q8NFH5 326 aa11.92□□□□□ -0.5
SMN1-204ENST00000506163 DEFB104AQ8WTQ1 72 aa11.92□□□□□ -0.5
SMN1-204ENST00000506163 NIT2Q9NQR4 276 aa11.92□□□□□ -0.5
SMN1-204ENST00000506163 HERC2O95714 4834 aa11.91□□□□□ -0.5
SMN1-204ENST00000506163 A0A087WTM6 91 aa11.91□□□□□ -0.5
SMN1-204ENST00000506163 A0A1B0GUT8 65 aa11.91□□□□□ -0.5
SMN1-204ENST00000506163 LAGE3Q14657 143 aa11.9□□□□□ -0.5
SMN1-204ENST00000506163 RPL39LQ96EH5 51 aaKnown RBP11.9□□□□□ -0.5
SMN1-204ENST00000506163 RNF185Q96GF1 192 aa11.9□□□□□ -0.5
SMN1-204ENST00000506163 SMIM27A0A1W2PRY6 76 aa11.89□□□□□ -0.51
SMN1-204ENST00000506163 LRCOL1A6NCL2 159 aa11.89□□□□□ -0.51
SMN1-204ENST00000506163 KLK12Q9UKR0 248 aa11.89□□□□□ -0.51
SMN1-204ENST00000506163 C16orf90A8MZG2 172 aa11.88□□□□□ -0.51
SMN1-204ENST00000506163 MPV17L2Q567V2 206 aa11.88□□□□□ -0.51
SMN1-204ENST00000506163 TMEM262E9PQX1 116 aa11.87□□□□□ -0.51
SMN1-204ENST00000506163 IQCJQ1A5X6 159 aa11.87□□□□□ -0.51
SMN1-204ENST00000506163 SMIM15Q7Z3B0 74 aa11.87□□□□□ -0.51
SMN1-204ENST00000506163 MAPKAPK5-AS1Q8N8E1 139 aa11.87□□□□□ -0.51
SMN1-204ENST00000506163 CHCHD5Q9BSY4 110 aa11.87□□□□□ -0.51
SMN1-204ENST00000506163 TMEM191AQ9H0A3 160 aa11.87□□□□□ -0.51
SMN1-204ENST00000506163 URGCP-MRPS24S4R325 110 aa11.87□□□□□ -0.51
SMN1-204ENST00000506163 RYR1P21817 5038 aa11.87□□□□□ -0.51
SMN1-204ENST00000506163 A0A087WX48 190 aa11.86□□□□□ -0.51
SMN1-204ENST00000506163 TMEM97Q5BJF2 176 aa11.86□□□□□ -0.51
SMN1-204ENST00000506163 ATRAIDQ6UW56 229 aa11.86□□□□□ -0.51
SMN1-204ENST00000506163 Q8N976 141 aa11.86□□□□□ -0.51
SMN1-204ENST00000506163 BORCS7Q96B45 105 aa11.86□□□□□ -0.51
SMN1-204ENST00000506163 CHCHD7Q9BUK0 85 aa11.86□□□□□ -0.51
SMN1-204ENST00000506163 NAT8BQ9UHF3 227 aa11.86□□□□□ -0.51
SMN1-204ENST00000506163 TRAV8-3A0A0A6YYJ7 113 aa11.86□□□□□ -0.51
SMN1-204ENST00000506163 RAB4AP20338 218 aa11.86□□□□□ -0.51
SMN1-204ENST00000506163 GAGE6Q13070 117 aa11.86□□□□□ -0.51
SMN1-204ENST00000506163 AMN1Q8IY45 258 aa11.86□□□□□ -0.51
SMN1-204ENST00000506163 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.86□□□□□ -0.51
SMN1-204ENST00000506163 FRZBQ92765 325 aa11.86□□□□□ -0.51
SMN1-204ENST00000506163 TRBV25-1A0A075B6N4 114 aa11.85□□□□□ -0.51
SMN1-204ENST00000506163 RIGQ13278 110 aa11.85□□□□□ -0.51
SMN1-204ENST00000506163 WFDC2Q14508 124 aa11.85□□□□□ -0.51
SMN1-204ENST00000506163 ENHOQ6UWT2 76 aa11.85□□□□□ -0.51
SMN1-204ENST00000506163 IGHV1-24A0A0C4DH33 117 aa11.84□□□□□ -0.51
SMN1-204ENST00000506163 PSCAO43653 123 aa11.84□□□□□ -0.51
SMN1-204ENST00000506163 RPS10P46783 165 aaKnown RBP11.84□□□□□ -0.51
SMN1-204ENST00000506163 UBE2WQ96B02 151 aa11.84□□□□□ -0.51
SMN1-204ENST00000506163 RBX1P62877 108 aa11.83□□□□□ -0.52
SMN1-204ENST00000506163 ADCYAP1P18509 176 aa11.82□□□□□ -0.52
SMN1-204ENST00000506163 KCNIP4Q6PIL6 250 aa11.82□□□□□ -0.52
SMN1-204ENST00000506163 TRBV6-5A0A0K0K1A5 114 aa11.81□□□□□ -0.52
SMN1-204ENST00000506163 SDHAF1A6NFY7 115 aa11.81□□□□□ -0.52
SMN1-204ENST00000506163 SMKR1H3BMG3 65 aa11.81□□□□□ -0.52
SMN1-204ENST00000506163 ELOBQ15370 118 aa11.81□□□□□ -0.52
SMN1-204ENST00000506163 TMEM243Q9BU79 118 aa11.81□□□□□ -0.52
SMN1-204ENST00000506163 TM2D2Q9BX73 214 aa11.81□□□□□ -0.52
SMN1-204ENST00000506163 KRTAP17-1Q9BYP8 105 aa11.81□□□□□ -0.52
SMN1-204ENST00000506163 PGPEP1Q9NXJ5 209 aa11.81□□□□□ -0.52
SMN1-204ENST00000506163 APOBP04114 4563 aaKnown RBP11.8□□□□□ -0.52
SMN1-204ENST00000506163 HSPG2P98160 4391 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms