RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 PPBPP02775 128 aa3.48□□□□□ -1.85
DEPDC1B-203ENST00000505017 ARMS2P0C7Q2 107 aa3.48□□□□□ -1.85
DEPDC1B-203ENST00000505017 ZNF705DP0CH99 300 aaPredicted RBP3.48□□□□□ -1.85
DEPDC1B-203ENST00000505017 ZNF705BP0CI00 300 aaPredicted RBP3.48□□□□□ -1.85
DEPDC1B-203ENST00000505017 GZMBP10144 247 aa3.48□□□□□ -1.85
DEPDC1B-203ENST00000505017 ESDP10768 282 aa3.48□□□□□ -1.85
DEPDC1B-203ENST00000505017 RNASE4P34096 147 aaKnown RBP3.48□□□□□ -1.85
DEPDC1B-203ENST00000505017 ASIPP42127 132 aa3.48□□□□□ -1.85
DEPDC1B-203ENST00000505017 NDUFA6P56556 154 aa3.48□□□□□ -1.85
DEPDC1B-203ENST00000505017 NUTF2P61970 127 aaKnown RBP3.48□□□□□ -1.85
DEPDC1B-203ENST00000505017 PRR9Q5T870 116 aa3.48□□□□□ -1.85
DEPDC1B-203ENST00000505017 LYZL1Q6UWQ5 148 aa3.48□□□□□ -1.85
DEPDC1B-203ENST00000505017 FAM159AQ6UWV7 190 aa3.48□□□□□ -1.85
DEPDC1B-203ENST00000505017 AMTNQ6UX39 209 aa3.48□□□□□ -1.85
DEPDC1B-203ENST00000505017 PACRGQ96M98 296 aaPredicted RBP3.48□□□□□ -1.85
DEPDC1B-203ENST00000505017 TMEM191AQ9H0A3 160 aa3.48□□□□□ -1.85
DEPDC1B-203ENST00000505017 LAMTOR2Q9Y2Q5 125 aa3.48□□□□□ -1.85
DEPDC1B-203ENST00000505017 IGHV1OR15-1A0A075B7D0 117 aa3.47□□□□□ -1.85
DEPDC1B-203ENST00000505017 TMSB15BA0A087X1C1 80 aa3.47□□□□□ -1.85
DEPDC1B-203ENST00000505017 LOC102724200A0A096LPH7 203 aaPredicted RBP3.47□□□□□ -1.85
DEPDC1B-203ENST00000505017 NXPH4O95158 308 aa3.47□□□□□ -1.85
DEPDC1B-203ENST00000505017 INSP01308 110 aa3.47□□□□□ -1.85
DEPDC1B-203ENST00000505017 NTF3P20783 257 aa3.47□□□□□ -1.85
DEPDC1B-203ENST00000505017 S100A4P26447 101 aaKnown RBP3.47□□□□□ -1.85
DEPDC1B-203ENST00000505017 S100A2P29034 98 aa3.47□□□□□ -1.85
DEPDC1B-203ENST00000505017 XGP55808 180 aa3.47□□□□□ -1.85
DEPDC1B-203ENST00000505017 DEFB1P60022 68 aa3.47□□□□□ -1.85
DEPDC1B-203ENST00000505017 SLAQ13239 276 aa3.47□□□□□ -1.85
DEPDC1B-203ENST00000505017 GDF5OSQ5U4N7 250 aa3.47□□□□□ -1.85
DEPDC1B-203ENST00000505017 FAM104BQ5XKR9 115 aa3.47□□□□□ -1.85
DEPDC1B-203ENST00000505017 MORN3Q6PF18 240 aaPredicted RBP3.47□□□□□ -1.85
DEPDC1B-203ENST00000505017 STHQ8IWL8 128 aa3.47□□□□□ -1.85
DEPDC1B-203ENST00000505017 HIST3H2BBQ8N257 126 aa3.47□□□□□ -1.85
DEPDC1B-203ENST00000505017 TMEM256Q8N2U0 113 aa3.47□□□□□ -1.85
DEPDC1B-203ENST00000505017 WFDC9Q8NEX5 89 aa3.47□□□□□ -1.85
DEPDC1B-203ENST00000505017 TMEM158Q8WZ71 300 aa3.47□□□□□ -1.85
DEPDC1B-203ENST00000505017 PTH2Q96A98 100 aa3.47□□□□□ -1.85
DEPDC1B-203ENST00000505017 NDUFAF3Q9BU61 184 aa3.47□□□□□ -1.85
DEPDC1B-203ENST00000505017 TPPP3Q9BW30 176 aa3.47□□□□□ -1.85
DEPDC1B-203ENST00000505017 U3KQK5 164 aa3.47□□□□□ -1.85
DEPDC1B-203ENST00000505017 TEP1Q99973 2627 aaKnown RBP3.46□□□□□ -1.86
DEPDC1B-203ENST00000505017 TRAV12-3A0A0B4J271 114 aa3.46□□□□□ -1.86
DEPDC1B-203ENST00000505017 GRIFINA4D1Z8 144 aa3.46□□□□□ -1.86
DEPDC1B-203ENST00000505017 KNCNA6PVL3 124 aa3.46□□□□□ -1.86
DEPDC1B-203ENST00000505017 RTL8CO15255 209 aa3.46□□□□□ -1.86
DEPDC1B-203ENST00000505017 PPP1R17O96001 155 aa3.46□□□□□ -1.86
DEPDC1B-203ENST00000505017 PRB4P10163 310 aaPredicted RBP3.46□□□□□ -1.86
DEPDC1B-203ENST00000505017 PMCHP20382 165 aa3.46□□□□□ -1.86
DEPDC1B-203ENST00000505017 SRIP30626 198 aa3.46□□□□□ -1.86
DEPDC1B-203ENST00000505017 SPINK13Q1W4C9 94 aa3.46□□□□□ -1.86
DEPDC1B-203ENST00000505017 SPANXN1Q5VSR9 72 aa3.46□□□□□ -1.86
DEPDC1B-203ENST00000505017 BAGE3Q86Y29 109 aa3.46□□□□□ -1.86
DEPDC1B-203ENST00000505017 ORMDL3Q8N138 153 aa3.46□□□□□ -1.86
DEPDC1B-203ENST00000505017 C18orf32Q8TCD1 76 aa3.46□□□□□ -1.86
DEPDC1B-203ENST00000505017 CHCHD1Q96BP2 118 aaKnown RBP3.46□□□□□ -1.86
DEPDC1B-203ENST00000505017 C9orf85Q96MD7 179 aa3.46□□□□□ -1.86
DEPDC1B-203ENST00000505017 AP1S3Q96PC3 154 aa3.46□□□□□ -1.86
DEPDC1B-203ENST00000505017 OVOL2Q9BRP0 275 aa3.46□□□□□ -1.86
DEPDC1B-203ENST00000505017 ALKBH7Q9BT30 221 aaPredicted RBP3.46□□□□□ -1.86
DEPDC1B-203ENST00000505017 ZMAT5Q9UDW3 170 aaKnown RBP3.46□□□□□ -1.86
DEPDC1B-203ENST00000505017 NAGKQ9UJ70 344 aa3.46□□□□□ -1.86
DEPDC1B-203ENST00000505017 PHLDA3Q9Y5J5 127 aa3.46□□□□□ -1.86
DEPDC1B-203ENST00000505017 ATRQ13535 2644 aa3.46□□□□□ -1.86
DEPDC1B-203ENST00000505017 IGHV3-16A0A0C4DH30 117 aa3.45□□□□□ -1.86
DEPDC1B-203ENST00000505017 RBMY1BA6NDE4 496 aaKnown RBP3.45□□□□□ -1.86
DEPDC1B-203ENST00000505017 RBMY1EA6NEQ0 496 aaKnown RBP3.45□□□□□ -1.86
DEPDC1B-203ENST00000505017 H3BVH4 76 aa3.45□□□□□ -1.86
DEPDC1B-203ENST00000505017 M0R2Z0 102 aa3.45□□□□□ -1.86
DEPDC1B-203ENST00000505017 M0R381 172 aa3.45□□□□□ -1.86
DEPDC1B-203ENST00000505017 CRXO43186 299 aaPredicted RBP3.45□□□□□ -1.86
DEPDC1B-203ENST00000505017 CD7P09564 240 aa3.45□□□□□ -1.86
DEPDC1B-203ENST00000505017 RBMY1DP0C7P1 496 aaKnown RBP3.45□□□□□ -1.86
DEPDC1B-203ENST00000505017 SMIM6P0DI80 62 aa3.45□□□□□ -1.86
DEPDC1B-203ENST00000505017 RNASE3P12724 160 aaKnown RBP3.45□□□□□ -1.86
DEPDC1B-203ENST00000505017 RAB4AP20338 218 aa3.45□□□□□ -1.86
DEPDC1B-203ENST00000505017 CKS2P33552 79 aa3.45□□□□□ -1.86
DEPDC1B-203ENST00000505017 MUC21Q5SSG8 566 aa3.45□□□□□ -1.86
DEPDC1B-203ENST00000505017 DEFB125Q8N687 156 aa3.45□□□□□ -1.86
DEPDC1B-203ENST00000505017 OR10AG1Q8NH19 301 aa3.45□□□□□ -1.86
DEPDC1B-203ENST00000505017 MRAP2Q96G30 205 aa3.45□□□□□ -1.86
DEPDC1B-203ENST00000505017 SPXQ9BT56 116 aa3.45□□□□□ -1.86
DEPDC1B-203ENST00000505017 DPH3P1Q9H4G8 78 aa3.45□□□□□ -1.86
DEPDC1B-203ENST00000505017 GSN-AS1Q9NRJ2 163 aa3.45□□□□□ -1.86
DEPDC1B-203ENST00000505017 SELENOKQ9Y6D0 94 aa3.45□□□□□ -1.86
DEPDC1B-203ENST00000505017 CUBNO60494 3623 aa3.44□□□□□ -1.86
DEPDC1B-203ENST00000505017 MUC4Q99102 2169 aa3.44□□□□□ -1.86
DEPDC1B-203ENST00000505017 TRAV12-2A0A075B6T6 113 aa3.44□□□□□ -1.86
DEPDC1B-203ENST00000505017 K7EMI3 77 aa3.44□□□□□ -1.86
DEPDC1B-203ENST00000505017 GNRH2O43555 120 aa3.44□□□□□ -1.86
DEPDC1B-203ENST00000505017 HSBP1O75506 76 aa3.44□□□□□ -1.86
DEPDC1B-203ENST00000505017 SERF1AO75920 110 aa3.44□□□□□ -1.86
DEPDC1B-203ENST00000505017 SMIM17P0DL12 118 aa3.44□□□□□ -1.86
DEPDC1B-203ENST00000505017 AKR1D1P51857 326 aa3.44□□□□□ -1.86
DEPDC1B-203ENST00000505017 MRPL51Q4U2R6 128 aaKnown RBP3.44□□□□□ -1.86
DEPDC1B-203ENST00000505017 C12orf54Q6X4T0 127 aa3.44□□□□□ -1.86
DEPDC1B-203ENST00000505017 AMN1Q8IY45 258 aa3.44□□□□□ -1.86
DEPDC1B-203ENST00000505017 C3orf56Q8N813 242 aa3.44□□□□□ -1.86
DEPDC1B-203ENST00000505017 RNF185Q96GF1 192 aa3.44□□□□□ -1.86
DEPDC1B-203ENST00000505017 PRELID3AQ96N28 172 aa3.44□□□□□ -1.86
DEPDC1B-203ENST00000505017 HIST1H2BLQ99880 126 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms