RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 ATP6V0E2Q8NHE4 81 aa7.67□□□□□ -1.18
ERCC8-208ENST00000497892 GTSF1Q8WW33 167 aa7.67□□□□□ -1.18
ERCC8-208ENST00000497892 KRTAP4-5Q9BYR2 181 aa7.67□□□□□ -1.18
ERCC8-208ENST00000497892 GATCO43716 136 aaKnown RBP7.66□□□□□ -1.18
ERCC8-208ENST00000497892 DNAH10OSP0CZ25 163 aa7.66□□□□□ -1.18
ERCC8-208ENST00000497892 SMIM17P0DL12 118 aa7.66□□□□□ -1.18
ERCC8-208ENST00000497892 LINC00315P59091 139 aa7.66□□□□□ -1.18
ERCC8-208ENST00000497892 ERVFC1-1P60608 527 aa7.66□□□□□ -1.18
ERCC8-208ENST00000497892 RAB14P61106 215 aa7.66□□□□□ -1.18
ERCC8-208ENST00000497892 WDR73Q6P4I2 378 aa7.66□□□□□ -1.18
ERCC8-208ENST00000497892 GTSF1LQ9H1H1 148 aa7.66□□□□□ -1.18
ERCC8-208ENST00000497892 MSRB1Q9NZV6 116 aa7.66□□□□□ -1.18
ERCC8-208ENST00000497892 BTF3P20290 206 aaKnown RBP7.65□□□□□ -1.18
ERCC8-208ENST00000497892 TMEM241Q24JQ0 296 aa7.65□□□□□ -1.18
ERCC8-208ENST00000497892 LELP1Q5T871 98 aa7.65□□□□□ -1.18
ERCC8-208ENST00000497892 OR10G8Q8NGN5 311 aa7.65□□□□□ -1.18
ERCC8-208ENST00000497892 OSTCQ9NRP0 149 aa7.65□□□□□ -1.18
ERCC8-208ENST00000497892 DNAH17Q9UFH2 4485 aa7.65□□□□□ -1.19
ERCC8-208ENST00000497892 TRBV7-3A0A075B6L6 115 aa7.64□□□□□ -1.19
ERCC8-208ENST00000497892 TRAV8-6A0A0B4J262 113 aa7.64□□□□□ -1.19
ERCC8-208ENST00000497892 PRSS29PA6NIE9 313 aa7.64□□□□□ -1.19
ERCC8-208ENST00000497892 A8MWL6 223 aa7.64□□□□□ -1.19
ERCC8-208ENST00000497892 K7EP13 123 aa7.64□□□□□ -1.19
ERCC8-208ENST00000497892 TRGC1P0CF51 173 aa7.64□□□□□ -1.19
ERCC8-208ENST00000497892 NTF3P20783 257 aa7.64□□□□□ -1.19
ERCC8-208ENST00000497892 EVI2AP22794 236 aa7.64□□□□□ -1.19
ERCC8-208ENST00000497892 UBE2D3P61077 147 aa7.64□□□□□ -1.19
ERCC8-208ENST00000497892 RPL23P62829 140 aaKnown RBP7.64□□□□□ -1.19
ERCC8-208ENST00000497892 UBE2D2P62837 147 aa7.64□□□□□ -1.19
ERCC8-208ENST00000497892 RPL36AP83881 106 aaKnown RBP7.64□□□□□ -1.19
ERCC8-208ENST00000497892 CLLU1Q5K131 121 aa7.64□□□□□ -1.19
ERCC8-208ENST00000497892 RPL36ALQ969Q0 106 aaKnown RBP7.64□□□□□ -1.19
ERCC8-208ENST00000497892 ISOC2Q96AB3 205 aa7.64□□□□□ -1.19
ERCC8-208ENST00000497892 NAT8Q9UHE5 227 aa7.64□□□□□ -1.19
ERCC8-208ENST00000497892 A0A087WWC5 75 aa7.63□□□□□ -1.19
ERCC8-208ENST00000497892 IGHV3-38A0A0C4DH36 116 aa7.63□□□□□ -1.19
ERCC8-208ENST00000497892 A0A1B0GVY2 172 aa7.63□□□□□ -1.19
ERCC8-208ENST00000497892 F5H697 171 aa7.63□□□□□ -1.19
ERCC8-208ENST00000497892 MGPP08493 103 aa7.63□□□□□ -1.19
ERCC8-208ENST00000497892 FOXA3P55318 350 aaPredicted RBP7.63□□□□□ -1.19
ERCC8-208ENST00000497892 IFITM2Q01629 132 aa7.63□□□□□ -1.19
ERCC8-208ENST00000497892 TWIST1Q15672 202 aa7.63□□□□□ -1.19
ERCC8-208ENST00000497892 LINC01556Q5JQF7 62 aa7.63□□□□□ -1.19
ERCC8-208ENST00000497892 OR10J3Q5JRS4 329 aa7.63□□□□□ -1.19
ERCC8-208ENST00000497892 NEXN-AS1Q8NBZ9 246 aa7.63□□□□□ -1.19
ERCC8-208ENST00000497892 TSKUQ8WUA8 353 aa7.63□□□□□ -1.19
ERCC8-208ENST00000497892 GFRA4Q9GZZ7 299 aa7.63□□□□□ -1.19
ERCC8-208ENST00000497892 DPH3P1Q9H4G8 78 aa7.63□□□□□ -1.19
ERCC8-208ENST00000497892 BIRC6Q9NR09 4857 aa7.63□□□□□ -1.19
ERCC8-208ENST00000497892 TRAV9-2A0A087WT02 112 aa7.62□□□□□ -1.19
ERCC8-208ENST00000497892 FAM231BA6NCW3 169 aa7.62□□□□□ -1.19
ERCC8-208ENST00000497892 ADIRFQ15847 76 aa7.62□□□□□ -1.19
ERCC8-208ENST00000497892 SUMO4Q6EEV6 95 aa7.62□□□□□ -1.19
ERCC8-208ENST00000497892 C15orf54Q8N8G6 183 aa7.62□□□□□ -1.19
ERCC8-208ENST00000497892 V9GYV3 84 aa7.62□□□□□ -1.19
ERCC8-208ENST00000497892 HIGD1CA8MV81 97 aa7.61□□□□□ -1.19
ERCC8-208ENST00000497892 H7C1H1 209 aa7.61□□□□□ -1.19
ERCC8-208ENST00000497892 M0QY20 66 aa7.61□□□□□ -1.19
ERCC8-208ENST00000497892 C10orf126Q8N4M7 172 aa7.61□□□□□ -1.19
ERCC8-208ENST00000497892 PGLYRP4Q96LB8 373 aa7.61□□□□□ -1.19
ERCC8-208ENST00000497892 PKHD1P08F94 4074 aa7.6□□□□□ -1.19
ERCC8-208ENST00000497892 PKD1P98161 4303 aa7.6□□□□□ -1.19
ERCC8-208ENST00000497892 Q6ZRN7 208 aaPredicted RBP7.6□□□□□ -1.19
ERCC8-208ENST00000497892 BORCS7Q96B45 105 aa7.6□□□□□ -1.19
ERCC8-208ENST00000497892 A0A1B0GUT8 65 aa7.59□□□□□ -1.19
ERCC8-208ENST00000497892 RASL11AQ6T310 242 aa7.59□□□□□ -1.19
ERCC8-208ENST00000497892 SMIM15Q7Z3B0 74 aa7.59□□□□□ -1.19
ERCC8-208ENST00000497892 DAZ4Q86SG3 579 aaKnown RBP7.59□□□□□ -1.19
ERCC8-208ENST00000497892 DNAJC30Q96LL9 226 aa7.59□□□□□ -1.19
ERCC8-208ENST00000497892 DAZ3Q9NR90 486 aaKnown RBP7.59□□□□□ -1.19
ERCC8-208ENST00000497892 TRBV6-8A0A0A6YYG3 113 aa7.58□□□□□ -1.2
ERCC8-208ENST00000497892 IGHV3-30P01768 117 aa7.58□□□□□ -1.2
ERCC8-208ENST00000497892 IGHV3-33P01772 117 aa7.58□□□□□ -1.2
ERCC8-208ENST00000497892 IGHV3-30-3P0DP02 117 aa7.58□□□□□ -1.2
ERCC8-208ENST00000497892 IGHV3-30-5P0DP03 117 aa7.58□□□□□ -1.2
ERCC8-208ENST00000497892 NFE4Q86UQ8 179 aa7.58□□□□□ -1.2
ERCC8-208ENST00000497892 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.58□□□□□ -1.2
ERCC8-208ENST00000497892 NAT8BQ9UHF3 227 aa7.58□□□□□ -1.2
ERCC8-208ENST00000497892 SMIM27A0A1W2PRY6 76 aa7.57□□□□□ -1.2
ERCC8-208ENST00000497892 IBA57-AS1B1ANH7 110 aa7.57□□□□□ -1.2
ERCC8-208ENST00000497892 LAGE3Q14657 143 aa7.57□□□□□ -1.2
ERCC8-208ENST00000497892 NIT1Q86X76 327 aa7.57□□□□□ -1.2
ERCC8-208ENST00000497892 NUP35Q8NFH5 326 aa7.57□□□□□ -1.2
ERCC8-208ENST00000497892 FRZBQ92765 325 aa7.57□□□□□ -1.2
ERCC8-208ENST00000497892 NIT2Q9NQR4 276 aa7.57□□□□□ -1.2
ERCC8-208ENST00000497892 TNFRSF18Q9Y5U5 241 aa7.57□□□□□ -1.2
ERCC8-208ENST00000497892 TRAV26-2A0A0B4J265 109 aa7.56□□□□□ -1.2
ERCC8-208ENST00000497892 PNRC1Q12796 327 aaPredicted RBP7.56□□□□□ -1.2
ERCC8-208ENST00000497892 TMEM97Q5BJF2 176 aa7.56□□□□□ -1.2
ERCC8-208ENST00000497892 UQCC3Q6UW78 93 aa7.56□□□□□ -1.2
ERCC8-208ENST00000497892 GATD1Q8NB37 220 aa7.56□□□□□ -1.2
ERCC8-208ENST00000497892 CHCHD7Q9BUK0 85 aa7.56□□□□□ -1.2
ERCC8-208ENST00000497892 TMEM191AQ9H0A3 160 aa7.56□□□□□ -1.2
ERCC8-208ENST00000497892 URGCP-MRPS24S4R325 110 aa7.56□□□□□ -1.2
ERCC8-208ENST00000497892 RIGQ13278 110 aa7.55□□□□□ -1.2
ERCC8-208ENST00000497892 NTM-AS1Q6ZSK4 140 aa7.55□□□□□ -1.2
ERCC8-208ENST00000497892 DNAH11Q96DT5 4516 aa7.54□□□□□ -1.2
ERCC8-208ENST00000497892 A0A087WX48 190 aa7.54□□□□□ -1.2
ERCC8-208ENST00000497892 IQCJQ1A5X6 159 aa7.54□□□□□ -1.2
ERCC8-208ENST00000497892 RPL39LQ96EH5 51 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms