RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 IGHV3-33P01772 117 aa9.66□□□□□ -0.86
SCAP-213ENST00000494938 IGHV3-30-3P0DP02 117 aa9.66□□□□□ -0.86
SCAP-213ENST00000494938 IGHV3-30-5P0DP03 117 aa9.66□□□□□ -0.86
SCAP-213ENST00000494938 RYR1P21817 5038 aa9.65□□□□□ -0.86
SCAP-213ENST00000494938 FOXA3P55318 350 aaPredicted RBP9.65□□□□□ -0.86
SCAP-213ENST00000494938 ERVFC1-1P60608 527 aa9.65□□□□□ -0.86
SCAP-213ENST00000494938 APOBP04114 4563 aaKnown RBP9.65□□□□□ -0.87
SCAP-213ENST00000494938 KRTAP10-2P60368 255 aa9.64□□□□□ -0.87
SCAP-213ENST00000494938 SPATA12Q7Z6I5 190 aa9.64□□□□□ -0.87
SCAP-213ENST00000494938 HSPG2P98160 4391 aa9.63□□□□□ -0.87
SCAP-213ENST00000494938 A8MWL6 223 aa9.63□□□□□ -0.87
SCAP-213ENST00000494938 TRGC1P0CF51 173 aa9.63□□□□□ -0.87
SCAP-213ENST00000494938 PEA15Q15121 130 aa9.63□□□□□ -0.87
SCAP-213ENST00000494938 TWIST1Q15672 202 aa9.63□□□□□ -0.87
SCAP-213ENST00000494938 TMEM241Q24JQ0 296 aa9.63□□□□□ -0.87
SCAP-213ENST00000494938 CT83Q5H943 113 aa9.63□□□□□ -0.87
SCAP-213ENST00000494938 SUMO4Q6EEV6 95 aa9.63□□□□□ -0.87
SCAP-213ENST00000494938 DAZ4Q86SG3 579 aaKnown RBP9.63□□□□□ -0.87
SCAP-213ENST00000494938 NIT1Q86X76 327 aa9.63□□□□□ -0.87
SCAP-213ENST00000494938 DAZ3Q9NR90 486 aaKnown RBP9.63□□□□□ -0.87
SCAP-213ENST00000494938 TRBV6-8A0A0A6YYG3 113 aa9.62□□□□□ -0.87
SCAP-213ENST00000494938 MGPP08493 103 aa9.62□□□□□ -0.87
SCAP-213ENST00000494938 FAM74A3Q4VXF1 159 aa9.62□□□□□ -0.87
SCAP-213ENST00000494938 NTM-AS1Q6ZSK4 140 aa9.62□□□□□ -0.87
SCAP-213ENST00000494938 PGLYRP4Q96LB8 373 aa9.62□□□□□ -0.87
SCAP-213ENST00000494938 DPH3P1Q9H4G8 78 aa9.62□□□□□ -0.87
SCAP-213ENST00000494938 SMDT1Q9H4I9 107 aa9.62□□□□□ -0.87
SCAP-213ENST00000494938 OSTCQ9NRP0 149 aa9.62□□□□□ -0.87
SCAP-213ENST00000494938 A0A087WTM6 91 aa9.61□□□□□ -0.87
SCAP-213ENST00000494938 C16orf90A8MZG2 172 aa9.61□□□□□ -0.87
SCAP-213ENST00000494938 RPL23P62829 140 aaKnown RBP9.61□□□□□ -0.87
SCAP-213ENST00000494938 DNAJC30Q96LL9 226 aa9.61□□□□□ -0.87
SCAP-213ENST00000494938 TSKUQ8WUA8 353 aa9.6□□□□□ -0.87
SCAP-213ENST00000494938 ISOC2Q96AB3 205 aa9.6□□□□□ -0.87
SCAP-213ENST00000494938 Q9HAA7 133 aa9.6□□□□□ -0.87
SCAP-213ENST00000494938 V9GYV3 84 aa9.6□□□□□ -0.87
SCAP-213ENST00000494938 LRCOL1A6NCL2 159 aa9.59□□□□□ -0.87
SCAP-213ENST00000494938 H7C1H1 209 aa9.59□□□□□ -0.87
SCAP-213ENST00000494938 LAGE3Q14657 143 aa9.59□□□□□ -0.87
SCAP-213ENST00000494938 RASL11AQ6T310 242 aa9.59□□□□□ -0.87
SCAP-213ENST00000494938 GATD1Q8NB37 220 aa9.59□□□□□ -0.87
SCAP-213ENST00000494938 GFRA4Q9GZZ7 299 aa9.59□□□□□ -0.87
SCAP-213ENST00000494938 NIT2Q9NQR4 276 aa9.59□□□□□ -0.87
SCAP-213ENST00000494938 NAT8Q9UHE5 227 aa9.59□□□□□ -0.87
SCAP-213ENST00000494938 FAM231BA6NCW3 169 aa9.58□□□□□ -0.88
SCAP-213ENST00000494938 FUSP35637 526 aaKnown RBP eCLIP9.58□□□□□ -0.88
SCAP-213ENST00000494938 PGPEP1Q9NXJ5 209 aa9.58□□□□□ -0.88
SCAP-213ENST00000494938 DNAH8Q96JB1 4490 aa9.57□□□□□ -0.88
SCAP-213ENST00000494938 TRAV26-2A0A0B4J265 109 aa9.57□□□□□ -0.88
SCAP-213ENST00000494938 HIGD1CA8MV81 97 aa9.57□□□□□ -0.88
SCAP-213ENST00000494938 TMEM262E9PQX1 116 aa9.57□□□□□ -0.88
SCAP-213ENST00000494938 C15orf54Q8N8G6 183 aa9.57□□□□□ -0.88
SCAP-213ENST00000494938 CHCHD7Q9BUK0 85 aa9.57□□□□□ -0.88
SCAP-213ENST00000494938 KLK12Q9UKR0 248 aa9.57□□□□□ -0.88
SCAP-213ENST00000494938 A0A087WX48 190 aa9.56□□□□□ -0.88
SCAP-213ENST00000494938 TRAV8-3A0A0A6YYJ7 113 aa9.56□□□□□ -0.88
SCAP-213ENST00000494938 A0A1B0GUT8 65 aa9.56□□□□□ -0.88
SCAP-213ENST00000494938 EREGO14944 169 aa9.56□□□□□ -0.88
SCAP-213ENST00000494938 ADIRFQ15847 76 aa9.56□□□□□ -0.88
SCAP-213ENST00000494938 TMEM97Q5BJF2 176 aa9.56□□□□□ -0.88
SCAP-213ENST00000494938 MAPKAPK5-AS1Q8N8E1 139 aa9.56□□□□□ -0.88
SCAP-213ENST00000494938 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.56□□□□□ -0.88
SCAP-213ENST00000494938 URGCP-MRPS24S4R325 110 aa9.56□□□□□ -0.88
SCAP-213ENST00000494938 IFITM2Q01629 132 aa9.55□□□□□ -0.88
SCAP-213ENST00000494938 IQCJQ1A5X6 159 aa9.55□□□□□ -0.88
SCAP-213ENST00000494938 SMIM15Q7Z3B0 74 aa9.55□□□□□ -0.88
SCAP-213ENST00000494938 NUP35Q8NFH5 326 aa9.55□□□□□ -0.88
SCAP-213ENST00000494938 FRZBQ92765 325 aa9.55□□□□□ -0.88
SCAP-213ENST00000494938 CHCHD5Q9BSY4 110 aa9.55□□□□□ -0.88
SCAP-213ENST00000494938 TM2D2Q9BX73 214 aa9.55□□□□□ -0.88
SCAP-213ENST00000494938 PSCAO43653 123 aa9.54□□□□□ -0.88
SCAP-213ENST00000494938 ELOBQ15370 118 aa9.54□□□□□ -0.88
SCAP-213ENST00000494938 MPV17L2Q567V2 206 aa9.54□□□□□ -0.88
SCAP-213ENST00000494938 ATRAIDQ6UW56 229 aa9.54□□□□□ -0.88
SCAP-213ENST00000494938 ENHOQ6UWT2 76 aa9.54□□□□□ -0.88
SCAP-213ENST00000494938 DEFB104AQ8WTQ1 72 aa9.54□□□□□ -0.88
SCAP-213ENST00000494938 RNF185Q96GF1 192 aa9.54□□□□□ -0.88
SCAP-213ENST00000494938 TRBV25-1A0A075B6N4 114 aa9.53□□□□□ -0.88
SCAP-213ENST00000494938 IGHV1-24A0A0C4DH33 117 aa9.53□□□□□ -0.88
SCAP-213ENST00000494938 SMIM27A0A1W2PRY6 76 aa9.53□□□□□ -0.88
SCAP-213ENST00000494938 GAS8-AS1O95177 125 aa9.53□□□□□ -0.88
SCAP-213ENST00000494938 RAB14P61106 215 aa9.53□□□□□ -0.88
SCAP-213ENST00000494938 GAGE6Q13070 117 aa9.53□□□□□ -0.88
SCAP-213ENST00000494938 KCNIP4Q6PIL6 250 aa9.53□□□□□ -0.88
SCAP-213ENST00000494938 Q8N976 141 aa9.53□□□□□ -0.88
SCAP-213ENST00000494938 UBE2WQ96B02 151 aa9.53□□□□□ -0.88
SCAP-213ENST00000494938 RPL39LQ96EH5 51 aaKnown RBP9.53□□□□□ -0.88
SCAP-213ENST00000494938 TMEM191AQ9H0A3 160 aa9.53□□□□□ -0.88
SCAP-213ENST00000494938 RAB4AP20338 218 aa9.52□□□□□ -0.89
SCAP-213ENST00000494938 RBX1P62877 108 aa9.52□□□□□ -0.89
SCAP-213ENST00000494938 WFDC2Q14508 124 aa9.52□□□□□ -0.89
SCAP-213ENST00000494938 CLLU1Q5K131 121 aa9.52□□□□□ -0.89
SCAP-213ENST00000494938 BORCS7Q96B45 105 aa9.52□□□□□ -0.89
SCAP-213ENST00000494938 KRTAP17-1Q9BYP8 105 aa9.52□□□□□ -0.89
SCAP-213ENST00000494938 CDK2AP2O75956 126 aa9.51□□□□□ -0.89
SCAP-213ENST00000494938 PKIAP61925 76 aa9.51□□□□□ -0.89
SCAP-213ENST00000494938 RIGQ13278 110 aa9.51□□□□□ -0.89
SCAP-213ENST00000494938 Q8N814 137 aa9.51□□□□□ -0.89
SCAP-213ENST00000494938 NAT8BQ9UHF3 227 aa9.51□□□□□ -0.89
SCAP-213ENST00000494938 TRBV6-5A0A0K0K1A5 114 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms