RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 RNF185Q96GF1 192 aa5.27□□□□□ -1.57
HERC4-211ENST00000492996 FLNAP21333 2647 aaKnown RBP5.27□□□□□ -1.57
HERC4-211ENST00000492996 DNAJC9-AS1A6NH13 148 aa5.27□□□□□ -1.57
HERC4-211ENST00000492996 M0R381 172 aa5.27□□□□□ -1.57
HERC4-211ENST00000492996 IGKV3-20P01619 116 aa5.27□□□□□ -1.57
HERC4-211ENST00000492996 IGLV1-40P01703 118 aa5.27□□□□□ -1.57
HERC4-211ENST00000492996 RNASE4P34096 147 aaKnown RBP5.27□□□□□ -1.57
HERC4-211ENST00000492996 PSMB2P49721 201 aa5.27□□□□□ -1.57
HERC4-211ENST00000492996 HIST2H2BDQ6DRA6 164 aa5.27□□□□□ -1.57
HERC4-211ENST00000492996 TTTY13Q9BZ97 58 aa5.27□□□□□ -1.57
HERC4-211ENST00000492996 DAZ1Q9NQZ3 744 aaKnown RBP5.27□□□□□ -1.57
HERC4-211ENST00000492996 ITPR3Q14573 2671 aa5.27□□□□□ -1.57
HERC4-211ENST00000492996 IGHV7-4-1A0A0J9YVY3 117 aa5.26□□□□□ -1.57
HERC4-211ENST00000492996 ADARB2-AS1A8MUL3 147 aa5.26□□□□□ -1.57
HERC4-211ENST00000492996 NHLRC4P0CG21 123 aaPredicted RBP5.26□□□□□ -1.57
HERC4-211ENST00000492996 S100A4P26447 101 aaKnown RBP5.26□□□□□ -1.57
HERC4-211ENST00000492996 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.26□□□□□ -1.57
HERC4-211ENST00000492996 NF1P21359 2839 aa5.26□□□□□ -1.57
HERC4-211ENST00000492996 FBN3Q75N90 2809 aa5.26□□□□□ -1.57
HERC4-211ENST00000492996 LOC107984640A0A0U1RRK4 108 aa5.26□□□□□ -1.57
HERC4-211ENST00000492996 TNFRSF6BO95407 300 aa5.26□□□□□ -1.57
HERC4-211ENST00000492996 FGF6P10767 208 aa5.26□□□□□ -1.57
HERC4-211ENST00000492996 MRPL53Q96EL3 112 aaKnown RBP5.26□□□□□ -1.57
HERC4-211ENST00000492996 SMR3AQ99954 134 aa5.26□□□□□ -1.57
HERC4-211ENST00000492996 CHAC1Q9BUX1 264 aa5.26□□□□□ -1.57
HERC4-211ENST00000492996 U3KQK5 164 aa5.26□□□□□ -1.57
HERC4-211ENST00000492996 ZFAND2AQ8N6M9 145 aa5.25□□□□□ -1.57
HERC4-211ENST00000492996 E9PLD3 99 aa5.25□□□□□ -1.57
HERC4-211ENST00000492996 TMEM262E9PQX1 116 aa5.25□□□□□ -1.57
HERC4-211ENST00000492996 H3BUA1 57 aa5.25□□□□□ -1.57
HERC4-211ENST00000492996 GNRH2O43555 120 aa5.25□□□□□ -1.57
HERC4-211ENST00000492996 ZNF688P0C7X2 276 aa5.25□□□□□ -1.57
HERC4-211ENST00000492996 PPDPFLQ8WWR9 84 aa5.25□□□□□ -1.57
HERC4-211ENST00000492996 SOCS3O14543 225 aa5.25□□□□□ -1.57
HERC4-211ENST00000492996 HBDP02042 147 aa5.25□□□□□ -1.57
HERC4-211ENST00000492996 LEPP41159 167 aa5.25□□□□□ -1.57
HERC4-211ENST00000492996 SYNJ2BPP57105 145 aa5.25□□□□□ -1.57
HERC4-211ENST00000492996 NFE4Q86UQ8 179 aa5.25□□□□□ -1.57
HERC4-211ENST00000492996 DEFB104AQ8WTQ1 72 aa5.25□□□□□ -1.57
HERC4-211ENST00000492996 LINC00477Q96M19 166 aa5.25□□□□□ -1.57
HERC4-211ENST00000492996 HIST1H4GQ99525 98 aa5.25□□□□□ -1.57
HERC4-211ENST00000492996 OVOL1O14753 267 aa5.24□□□□□ -1.57
HERC4-211ENST00000492996 HOXA3O43365 443 aaPredicted RBP5.24□□□□□ -1.57
HERC4-211ENST00000492996 PSMB8P28062 276 aa5.24□□□□□ -1.57
HERC4-211ENST00000492996 CNFNQ9BYD5 112 aa5.24□□□□□ -1.57
HERC4-211ENST00000492996 LINC00694P0DN24 101 aa5.24□□□□□ -1.57
HERC4-211ENST00000492996 SRSF2Q01130 221 aaKnown RBP5.24□□□□□ -1.57
HERC4-211ENST00000492996 FHL3Q13643 280 aa5.24□□□□□ -1.57
HERC4-211ENST00000492996 IFI27L1Q96BM0 104 aa5.24□□□□□ -1.57
HERC4-211ENST00000492996 TRAV21A0A0B4J279 112 aa5.24□□□□□ -1.57
HERC4-211ENST00000492996 RHODO00212 210 aa5.24□□□□□ -1.57
HERC4-211ENST00000492996 SRSF9Q13242 221 aaKnown RBP eCLIP5.24□□□□□ -1.572e-8■■■□□ 15.1
HERC4-211ENST00000492996 DEFB136Q30KP8 78 aa5.24□□□□□ -1.57
HERC4-211ENST00000492996 C12orf74Q32Q52 190 aa5.24□□□□□ -1.57
HERC4-211ENST00000492996 PSMG4Q5JS54 123 aa5.24□□□□□ -1.57
HERC4-211ENST00000492996 C14orf178Q8N769 122 aaPredicted RBP5.24□□□□□ -1.57
HERC4-211ENST00000492996 PHLDA3Q9Y5J5 127 aa5.24□□□□□ -1.57
HERC4-211ENST00000492996 CUBNO60494 3623 aa5.23□□□□□ -1.57
HERC4-211ENST00000492996 TRAV4A0A0B4J268 109 aa5.23□□□□□ -1.57
HERC4-211ENST00000492996 MGPP08493 103 aa5.23□□□□□ -1.57
HERC4-211ENST00000492996 KHDC1LQ5JSQ8 128 aa5.23□□□□□ -1.57
HERC4-211ENST00000492996 TMEM126AQ9H061 195 aa5.23□□□□□ -1.57
HERC4-211ENST00000492996 DKK2Q9UBU2 259 aa5.23□□□□□ -1.57
HERC4-211ENST00000492996 MUC4Q99102 2169 aa5.23□□□□□ -1.57
HERC4-211ENST00000492996 PRSS1P07477 247 aa5.23□□□□□ -1.57
HERC4-211ENST00000492996 SCGB1C2P0DMR2 95 aa5.23□□□□□ -1.57
HERC4-211ENST00000492996 CEND1Q8N111 149 aa5.23□□□□□ -1.57
HERC4-211ENST00000492996 C10orf126Q8N4M7 172 aa5.23□□□□□ -1.57
HERC4-211ENST00000492996 OR13C6PQ8NH95 151 aa5.23□□□□□ -1.57
HERC4-211ENST00000492996 DLX4Q92988 240 aaPredicted RBP5.23□□□□□ -1.57
HERC4-211ENST00000492996 DUX3Q96PT4 197 aa5.23□□□□□ -1.57
HERC4-211ENST00000492996 ITPR2Q14571 2701 aa5.22□□□□□ -1.57
HERC4-211ENST00000492996 TRAV12-2A0A075B6T6 113 aa5.22□□□□□ -1.57
HERC4-211ENST00000492996 TRAV12-3A0A0B4J271 114 aa5.22□□□□□ -1.57
HERC4-211ENST00000492996 F5H768 121 aa5.22□□□□□ -1.57
HERC4-211ENST00000492996 ASIPP42127 132 aa5.22□□□□□ -1.57
HERC4-211ENST00000492996 C18orf65Q6ZTR6 163 aa5.22□□□□□ -1.57
HERC4-211ENST00000492996 JMJD1CQ15652 2540 aa5.22□□□□□ -1.57
HERC4-211ENST00000492996 IGHV4OR15-8A0A075B7B6 117 aa5.22□□□□□ -1.57
HERC4-211ENST00000492996 A0A087WW49 117 aa5.22□□□□□ -1.57
HERC4-211ENST00000492996 RRN3P1Q2M238 152 aa5.22□□□□□ -1.57
HERC4-211ENST00000492996 EDA2RQ9HAV5 297 aa5.22□□□□□ -1.57
HERC4-211ENST00000492996 FAT2Q9NYQ8 4349 aa5.22□□□□□ -1.57
HERC4-211ENST00000492996 A8MWV9 139 aa5.22□□□□□ -1.57
HERC4-211ENST00000492996 KRTAP10-3P60369 221 aa5.22□□□□□ -1.57
HERC4-211ENST00000492996 FAM19A5Q7Z5A7 132 aaPredicted RBP5.22□□□□□ -1.57
HERC4-211ENST00000492996 LINC00482Q8N8I6 264 aa5.22□□□□□ -1.57
HERC4-211ENST00000492996 DCANP1Q8TF63 244 aa5.22□□□□□ -1.57
HERC4-211ENST00000492996 NXT2Q9NPJ8 142 aaKnown RBP5.22□□□□□ -1.57
HERC4-211ENST00000492996 SPANXA1Q9NS26 97 aa5.22□□□□□ -1.57
HERC4-211ENST00000492996 LENEPQ9Y5L5 61 aa5.22□□□□□ -1.57
HERC4-211ENST00000492996 GTSCR1Q86UQ5 136 aa5.21□□□□□ -1.57
HERC4-211ENST00000492996 ATP6V0E2Q8NHE4 81 aa5.21□□□□□ -1.57
HERC4-211ENST00000492996 RPL39LQ96EH5 51 aaKnown RBP5.21□□□□□ -1.57
HERC4-211ENST00000492996 JPT2Q9H910 190 aa5.21□□□□□ -1.57
HERC4-211ENST00000492996 HOXD3P31249 432 aaPredicted RBP5.21□□□□□ -1.58
HERC4-211ENST00000492996 C11orf44Q8N8P7 122 aa5.21□□□□□ -1.58
HERC4-211ENST00000492996 NRACQ8N912 160 aa5.21□□□□□ -1.58
HERC4-211ENST00000492996 DNAJC30Q96LL9 226 aa5.21□□□□□ -1.58
HERC4-211ENST00000492996 ZNF702PQ9H963 129 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms