RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 CT83Q5H943 113 aa10.38□□□□□ -0.75
VPS26A-207ENST00000490696 SMDT1Q9H4I9 107 aa10.38□□□□□ -0.75
VPS26A-207ENST00000490696 DNAH11Q96DT5 4516 aa10.37□□□□□ -0.75
VPS26A-207ENST00000490696 A8MWL6 223 aa10.37□□□□□ -0.75
VPS26A-207ENST00000490696 M0QY20 66 aa10.37□□□□□ -0.75
VPS26A-207ENST00000490696 FAM74A3Q4VXF1 159 aa10.37□□□□□ -0.75
VPS26A-207ENST00000490696 NFE4Q86UQ8 179 aa10.37□□□□□ -0.75
VPS26A-207ENST00000490696 Q8N3U1 123 aa10.37□□□□□ -0.75
VPS26A-207ENST00000490696 IBA57-AS1B1ANH7 110 aa10.36□□□□□ -0.75
VPS26A-207ENST00000490696 IGHV3-30P01768 117 aa10.36□□□□□ -0.75
VPS26A-207ENST00000490696 IGHV3-33P01772 117 aa10.36□□□□□ -0.75
VPS26A-207ENST00000490696 MGPP08493 103 aa10.36□□□□□ -0.75
VPS26A-207ENST00000490696 IGHV3-30-3P0DP02 117 aa10.36□□□□□ -0.75
VPS26A-207ENST00000490696 IGHV3-30-5P0DP03 117 aa10.36□□□□□ -0.75
VPS26A-207ENST00000490696 FOXA3P55318 350 aaPredicted RBP10.36□□□□□ -0.75
VPS26A-207ENST00000490696 TMEM241Q24JQ0 296 aa10.36□□□□□ -0.75
VPS26A-207ENST00000490696 SUMO4Q6EEV6 95 aa10.36□□□□□ -0.75
VPS26A-207ENST00000490696 DPH3P1Q9H4G8 78 aa10.36□□□□□ -0.75
VPS26A-207ENST00000490696 OSTCQ9NRP0 149 aa10.36□□□□□ -0.75
VPS26A-207ENST00000490696 DYNC1H1Q14204 4646 aaKnown RBP10.35□□□□□ -0.75
VPS26A-207ENST00000490696 TWIST1Q15672 202 aa10.35□□□□□ -0.75
VPS26A-207ENST00000490696 ISOC2Q96AB3 205 aa10.35□□□□□ -0.75
VPS26A-207ENST00000490696 RPL23P62829 140 aaKnown RBP10.34□□□□□ -0.75
VPS26A-207ENST00000490696 TSKUQ8WUA8 353 aa10.34□□□□□ -0.75
VPS26A-207ENST00000490696 PGLYRP4Q96LB8 373 aa10.34□□□□□ -0.75
VPS26A-207ENST00000490696 LOC100996750A0A140TA64 210 aa10.33□□□□□ -0.76
VPS26A-207ENST00000490696 H7C1H1 209 aa10.33□□□□□ -0.76
VPS26A-207ENST00000490696 NIT1Q86X76 327 aa10.33□□□□□ -0.76
VPS26A-207ENST00000490696 KRTAP4-6Q9BYQ5 205 aa10.33□□□□□ -0.76
VPS26A-207ENST00000490696 GFRA4Q9GZZ7 299 aa10.33□□□□□ -0.76
VPS26A-207ENST00000490696 NAT8Q9UHE5 227 aa10.33□□□□□ -0.76
VPS26A-207ENST00000490696 V9GYV3 84 aa10.33□□□□□ -0.76
VPS26A-207ENST00000490696 TRBV6-8A0A0A6YYG3 113 aa10.32□□□□□ -0.76
VPS26A-207ENST00000490696 FAM231BA6NCW3 169 aa10.32□□□□□ -0.76
VPS26A-207ENST00000490696 LAGE3Q14657 143 aa10.32□□□□□ -0.76
VPS26A-207ENST00000490696 RASL11AQ6T310 242 aa10.32□□□□□ -0.76
VPS26A-207ENST00000490696 DAZ4Q86SG3 579 aaKnown RBP10.32□□□□□ -0.76
VPS26A-207ENST00000490696 C15orf54Q8N8G6 183 aa10.32□□□□□ -0.76
VPS26A-207ENST00000490696 DNAJC30Q96LL9 226 aa10.32□□□□□ -0.76
VPS26A-207ENST00000490696 DAZ3Q9NR90 486 aaKnown RBP10.32□□□□□ -0.76
VPS26A-207ENST00000490696 HIGD1CA8MV81 97 aa10.31□□□□□ -0.76
VPS26A-207ENST00000490696 ADIRFQ15847 76 aa10.31□□□□□ -0.76
VPS26A-207ENST00000490696 NTM-AS1Q6ZSK4 140 aa10.31□□□□□ -0.76
VPS26A-207ENST00000490696 SPATA12Q7Z6I5 190 aa10.31□□□□□ -0.76
VPS26A-207ENST00000490696 KRTAP10-2P60368 255 aa10.3□□□□□ -0.76
VPS26A-207ENST00000490696 RAB14P61106 215 aa10.3□□□□□ -0.76
VPS26A-207ENST00000490696 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.3□□□□□ -0.76
VPS26A-207ENST00000490696 CHCHD7Q9BUK0 85 aa10.3□□□□□ -0.76
VPS26A-207ENST00000490696 Q9HAA7 133 aa10.3□□□□□ -0.76
VPS26A-207ENST00000490696 NIT2Q9NQR4 276 aa10.3□□□□□ -0.76
VPS26A-207ENST00000490696 A0A087WTM6 91 aa10.29□□□□□ -0.76
VPS26A-207ENST00000490696 A0A1B0GUT8 65 aa10.29□□□□□ -0.76
VPS26A-207ENST00000490696 C16orf90A8MZG2 172 aa10.29□□□□□ -0.76
VPS26A-207ENST00000490696 TMEM97Q5BJF2 176 aa10.29□□□□□ -0.76
VPS26A-207ENST00000490696 SMIM15Q7Z3B0 74 aa10.29□□□□□ -0.76
VPS26A-207ENST00000490696 GATD1Q8NB37 220 aa10.29□□□□□ -0.76
VPS26A-207ENST00000490696 URGCP-MRPS24S4R325 110 aa10.29□□□□□ -0.76
VPS26A-207ENST00000490696 TRAV26-2A0A0B4J265 109 aa10.28□□□□□ -0.76
VPS26A-207ENST00000490696 IFITM2Q01629 132 aa10.28□□□□□ -0.76
VPS26A-207ENST00000490696 CLLU1Q5K131 121 aa10.28□□□□□ -0.76
VPS26A-207ENST00000490696 FRZBQ92765 325 aa10.28□□□□□ -0.76
VPS26A-207ENST00000490696 BORCS7Q96B45 105 aa10.28□□□□□ -0.76
VPS26A-207ENST00000490696 A0A087WX48 190 aa10.27□□□□□ -0.77
VPS26A-207ENST00000490696 TRAV8-3A0A0A6YYJ7 113 aa10.27□□□□□ -0.77
VPS26A-207ENST00000490696 IQCJQ1A5X6 159 aa10.27□□□□□ -0.77
VPS26A-207ENST00000490696 NUP35Q8NFH5 326 aa10.27□□□□□ -0.77
VPS26A-207ENST00000490696 TMEM262E9PQX1 116 aa10.26□□□□□ -0.77
VPS26A-207ENST00000490696 EREGO14944 169 aa10.26□□□□□ -0.77
VPS26A-207ENST00000490696 CHCHD5Q9BSY4 110 aa10.26□□□□□ -0.77
VPS26A-207ENST00000490696 TMEM191AQ9H0A3 160 aa10.26□□□□□ -0.77
VPS26A-207ENST00000490696 KLK12Q9UKR0 248 aa10.26□□□□□ -0.77
VPS26A-207ENST00000490696 LRP1BQ9NZR2 4599 aa10.25□□□□□ -0.77
VPS26A-207ENST00000490696 TRBV25-1A0A075B6N4 114 aa10.25□□□□□ -0.77
VPS26A-207ENST00000490696 SMIM27A0A1W2PRY6 76 aa10.25□□□□□ -0.77
VPS26A-207ENST00000490696 LRCOL1A6NCL2 159 aa10.25□□□□□ -0.77
VPS26A-207ENST00000490696 PSCAO43653 123 aa10.25□□□□□ -0.77
VPS26A-207ENST00000490696 ELOBQ15370 118 aa10.25□□□□□ -0.77
VPS26A-207ENST00000490696 MPV17L2Q567V2 206 aa10.25□□□□□ -0.77
VPS26A-207ENST00000490696 KCNIP4Q6PIL6 250 aa10.25□□□□□ -0.77
VPS26A-207ENST00000490696 RPL39LQ96EH5 51 aaKnown RBP10.25□□□□□ -0.77
VPS26A-207ENST00000490696 TM2D2Q9BX73 214 aa10.25□□□□□ -0.77
VPS26A-207ENST00000490696 NAT8BQ9UHF3 227 aa10.25□□□□□ -0.77
VPS26A-207ENST00000490696 IGHV1-24A0A0C4DH33 117 aa10.24□□□□□ -0.77
VPS26A-207ENST00000490696 PKIAP61925 76 aa10.24□□□□□ -0.77
VPS26A-207ENST00000490696 RIGQ13278 110 aa10.24□□□□□ -0.77
VPS26A-207ENST00000490696 RNF185Q96GF1 192 aa10.24□□□□□ -0.77
VPS26A-207ENST00000490696 GAGE6Q13070 117 aa10.23□□□□□ -0.77
VPS26A-207ENST00000490696 ATRAIDQ6UW56 229 aa10.23□□□□□ -0.77
VPS26A-207ENST00000490696 Q8N976 141 aa10.23□□□□□ -0.77
VPS26A-207ENST00000490696 UBE2WQ96B02 151 aa10.23□□□□□ -0.77
VPS26A-207ENST00000490696 PGPEP1Q9NXJ5 209 aa10.23□□□□□ -0.77
VPS26A-207ENST00000490696 DNAH5Q8TE73 4624 aa10.22□□□□□ -0.77
VPS26A-207ENST00000490696 GAS8-AS1O95177 125 aa10.22□□□□□ -0.77
VPS26A-207ENST00000490696 RAB4AP20338 218 aa10.22□□□□□ -0.77
VPS26A-207ENST00000490696 FUSP35637 526 aaKnown RBP eCLIP10.22□□□□□ -0.77
VPS26A-207ENST00000490696 RBX1P62877 108 aa10.22□□□□□ -0.77
VPS26A-207ENST00000490696 AMN1Q8IY45 258 aa10.22□□□□□ -0.77
VPS26A-207ENST00000490696 MAPKAPK5-AS1Q8N8E1 139 aa10.22□□□□□ -0.77
VPS26A-207ENST00000490696 DEFB104AQ8WTQ1 72 aa10.22□□□□□ -0.77
VPS26A-207ENST00000490696 TRBV6-5A0A0K0K1A5 114 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms