RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 PGPEP1Q9NXJ5 209 aa12.32□□□□□ -0.44
COL1A1-206ENST00000485870 HSPG2P98160 4391 aa12.32□□□□□ -0.44
COL1A1-206ENST00000485870 APOBP04114 4563 aaKnown RBP12.32□□□□□ -0.44
COL1A1-206ENST00000485870 TRGC1P0CF51 173 aa12.31□□□□□ -0.44
COL1A1-206ENST00000485870 NTF3P20783 257 aa12.31□□□□□ -0.44
COL1A1-206ENST00000485870 CTRLP40313 264 aa12.31□□□□□ -0.44
COL1A1-206ENST00000485870 SUMO4Q6EEV6 95 aa12.31□□□□□ -0.44
COL1A1-206ENST00000485870 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.31□□□□□ -0.44
COL1A1-206ENST00000485870 A0A087WX48 190 aa12.3□□□□□ -0.44
COL1A1-206ENST00000485870 TRBV6-8A0A0A6YYG3 113 aa12.3□□□□□ -0.44
COL1A1-206ENST00000485870 CDK2AP2O75956 126 aa12.3□□□□□ -0.44
COL1A1-206ENST00000485870 SMIM7Q9BQ49 75 aa12.3□□□□□ -0.44
COL1A1-206ENST00000485870 TRAV8-3A0A0A6YYJ7 113 aa12.29□□□□□ -0.44
COL1A1-206ENST00000485870 LRCOL1A6NCL2 159 aa12.29□□□□□ -0.44
COL1A1-206ENST00000485870 GATCO43716 136 aaKnown RBP12.29□□□□□ -0.44
COL1A1-206ENST00000485870 TWIST1Q15672 202 aa12.29□□□□□ -0.44
COL1A1-206ENST00000485870 CDPF1Q6NVV7 123 aa12.29□□□□□ -0.44
COL1A1-206ENST00000485870 KCNIP4Q6PIL6 250 aa12.29□□□□□ -0.44
COL1A1-206ENST00000485870 TM2D2Q9BX73 214 aa12.29□□□□□ -0.44
COL1A1-206ENST00000485870 DPH3P1Q9H4G8 78 aa12.29□□□□□ -0.44
COL1A1-206ENST00000485870 PCLOQ9Y6V0 5065 aa12.28□□□□□ -0.44
COL1A1-206ENST00000485870 TMEM262E9PQX1 116 aa12.28□□□□□ -0.44
COL1A1-206ENST00000485870 M0QY20 66 aa12.28□□□□□ -0.44
COL1A1-206ENST00000485870 SRP19P09132 144 aaKnown RBP12.28□□□□□ -0.44
COL1A1-206ENST00000485870 WDR73Q6P4I2 378 aa12.28□□□□□ -0.44
COL1A1-206ENST00000485870 KLK12Q9UKR0 248 aa12.28□□□□□ -0.44
COL1A1-206ENST00000485870 ZNF727A8MUV8 499 aa12.27□□□□□ -0.45
COL1A1-206ENST00000485870 H7C1H1 209 aa12.27□□□□□ -0.45
COL1A1-206ENST00000485870 FAM231DQ6ZW35 169 aa12.27□□□□□ -0.45
COL1A1-206ENST00000485870 GTSF1Q8WW33 167 aa12.27□□□□□ -0.45
COL1A1-206ENST00000485870 DNAJC30Q96LL9 226 aa12.27□□□□□ -0.45
COL1A1-206ENST00000485870 CHCHD7Q9BUK0 85 aa12.27□□□□□ -0.45
COL1A1-206ENST00000485870 CNFNQ9BYD5 112 aa12.27□□□□□ -0.45
COL1A1-206ENST00000485870 NDUFS6O75380 124 aaKnown RBP12.26□□□□□ -0.45
COL1A1-206ENST00000485870 NTM-AS1Q6ZSK4 140 aa12.26□□□□□ -0.45
COL1A1-206ENST00000485870 CHCHD5Q9BSY4 110 aa12.26□□□□□ -0.45
COL1A1-206ENST00000485870 TMEM97Q5BJF2 176 aa12.25□□□□□ -0.45
COL1A1-206ENST00000485870 RASL11AQ6T310 242 aa12.25□□□□□ -0.45
COL1A1-206ENST00000485870 TEX261Q6UWH6 196 aa12.25□□□□□ -0.45
COL1A1-206ENST00000485870 LINC01551Q86U37 167 aa12.25□□□□□ -0.45
COL1A1-206ENST00000485870 UBE2WQ96B02 151 aa12.25□□□□□ -0.45
COL1A1-206ENST00000485870 A8MWL6 223 aa12.24□□□□□ -0.45
COL1A1-206ENST00000485870 ELOBQ15370 118 aa12.24□□□□□ -0.45
COL1A1-206ENST00000485870 MPV17L2Q567V2 206 aa12.24□□□□□ -0.45
COL1A1-206ENST00000485870 ABCA13Q86UQ4 5058 aa12.24□□□□□ -0.45
COL1A1-206ENST00000485870 Q8N814 137 aa12.24□□□□□ -0.45
COL1A1-206ENST00000485870 PGLYRP4Q96LB8 373 aa12.24□□□□□ -0.45
COL1A1-206ENST00000485870 IGKV2D-24A0A075B6R9 120 aa12.23□□□□□ -0.45
COL1A1-206ENST00000485870 LECT2O14960 151 aa12.23□□□□□ -0.45
COL1A1-206ENST00000485870 WFDC2Q14508 124 aa12.23□□□□□ -0.45
COL1A1-206ENST00000485870 MAPKAPK5-AS1Q8N8E1 139 aa12.23□□□□□ -0.45
COL1A1-206ENST00000485870 C15orf54Q8N8G6 183 aa12.23□□□□□ -0.45
COL1A1-206ENST00000485870 RMI2Q96E14 147 aa12.23□□□□□ -0.45
COL1A1-206ENST00000485870 TRBV25-1A0A075B6N4 114 aa12.22□□□□□ -0.45
COL1A1-206ENST00000485870 IGLV5-52A0A0A0MRZ9 124 aa12.22□□□□□ -0.45
COL1A1-206ENST00000485870 KRTAP10-1P60331 282 aa12.22□□□□□ -0.45
COL1A1-206ENST00000485870 CT83Q5H943 113 aa12.22□□□□□ -0.45
COL1A1-206ENST00000485870 NIT2Q9NQR4 276 aa12.22□□□□□ -0.45
COL1A1-206ENST00000485870 TRAV26-2A0A0B4J265 109 aa12.21□□□□□ -0.45
COL1A1-206ENST00000485870 ANGP03950 147 aaKnown RBP12.21□□□□□ -0.45
COL1A1-206ENST00000485870 FOXA3P55318 350 aaPredicted RBP12.21□□□□□ -0.45
COL1A1-206ENST00000485870 PKIAP61925 76 aa12.21□□□□□ -0.45
COL1A1-206ENST00000485870 GAGE6Q13070 117 aa12.21□□□□□ -0.45
COL1A1-206ENST00000485870 SMIM15Q7Z3B0 74 aa12.21□□□□□ -0.45
COL1A1-206ENST00000485870 Q8N976 141 aa12.21□□□□□ -0.45
COL1A1-206ENST00000485870 NTN5Q8WTR8 489 aaPredicted RBP12.21□□□□□ -0.45
COL1A1-206ENST00000485870 KRTAP17-1Q9BYP8 105 aa12.21□□□□□ -0.45
COL1A1-206ENST00000485870 COX11Q9Y6N1 276 aa12.21□□□□□ -0.45
COL1A1-206ENST00000485870 IGHV1-24A0A0C4DH33 117 aa12.2□□□□□ -0.46
COL1A1-206ENST00000485870 C9JQL5 133 aa12.2□□□□□ -0.46
COL1A1-206ENST00000485870 GCSHP23434 173 aa12.2□□□□□ -0.46
COL1A1-206ENST00000485870 SRSF3P84103 164 aaKnown RBP12.2□□□□□ -0.46
COL1A1-206ENST00000485870 ATRAIDQ6UW56 229 aa12.2□□□□□ -0.46
COL1A1-206ENST00000485870 GATD1Q8NB37 220 aa12.2□□□□□ -0.46
COL1A1-206ENST00000485870 DEFB104AQ8WTQ1 72 aa12.2□□□□□ -0.46
COL1A1-206ENST00000485870 BAALCQ8WXS3 180 aa12.2□□□□□ -0.46
COL1A1-206ENST00000485870 OSTCQ9NRP0 149 aa12.2□□□□□ -0.46
COL1A1-206ENST00000485870 CRPP02741 224 aa12.19□□□□□ -0.46
COL1A1-206ENST00000485870 Q0VG73 95 aa12.19□□□□□ -0.46
COL1A1-206ENST00000485870 IQCJQ1A5X6 159 aa12.19□□□□□ -0.46
COL1A1-206ENST00000485870 TMEM241Q24JQ0 296 aa12.19□□□□□ -0.46
COL1A1-206ENST00000485870 TSKUQ8WUA8 353 aa12.19□□□□□ -0.46
COL1A1-206ENST00000485870 BORCS7Q96B45 105 aa12.19□□□□□ -0.46
COL1A1-206ENST00000485870 KRTAP4-5Q9BYR2 181 aa12.19□□□□□ -0.46
COL1A1-206ENST00000485870 RBX1P62877 108 aa12.18□□□□□ -0.46
COL1A1-206ENST00000485870 PEA15Q15121 130 aa12.18□□□□□ -0.46
COL1A1-206ENST00000485870 FAM74A3Q4VXF1 159 aa12.18□□□□□ -0.46
COL1A1-206ENST00000485870 ENHOQ6UWT2 76 aa12.18□□□□□ -0.46
COL1A1-206ENST00000485870 HIGD1CA8MV81 97 aa12.17□□□□□ -0.46
COL1A1-206ENST00000485870 RPL23P62829 140 aaKnown RBP12.17□□□□□ -0.46
COL1A1-206ENST00000485870 ADIRFQ15847 76 aa12.17□□□□□ -0.46
COL1A1-206ENST00000485870 ISOC2Q96AB3 205 aa12.17□□□□□ -0.46
COL1A1-206ENST00000485870 RPL39LQ96EH5 51 aaKnown RBP12.17□□□□□ -0.46
COL1A1-206ENST00000485870 GFRA4Q9GZZ7 299 aa12.17□□□□□ -0.46
COL1A1-206ENST00000485870 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.16□□□□□ -0.46
COL1A1-206ENST00000485870 CLPSL2Q6UWE3 100 aa12.16□□□□□ -0.46
COL1A1-206ENST00000485870 TMEM243Q9BU79 118 aa12.16□□□□□ -0.46
COL1A1-206ENST00000485870 C1orf43Q9BWL3 253 aa12.16□□□□□ -0.46
COL1A1-206ENST00000485870 V9GYV3 84 aa12.16□□□□□ -0.46
COL1A1-206ENST00000485870 A0A1B0GUT8 65 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms