RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 AKAP14Q86UN6 197 aa-0.02□□□□□ -2.41
SCAF11-207ENST00000484275 C20orf197Q8N268 126 aa-0.02□□□□□ -2.41
SCAF11-207ENST00000484275 COX7B2Q8TF08 81 aa-0.02□□□□□ -2.41
SCAF11-207ENST00000484275 V9GYV3 84 aa-0.02□□□□□ -2.41
SCAF11-207ENST00000484275 DOCK1Q14185 1865 aa-0.02□□□□□ -2.41
SCAF11-207ENST00000484275 ABCA2Q9BZC7 2435 aa-0.02□□□□□ -2.41
SCAF11-207ENST00000484275 VWFP04275 2813 aa-0.02□□□□□ -2.41
SCAF11-207ENST00000484275 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.03□□□□□ -2.41
SCAF11-207ENST00000484275 PXDNQ92626 1479 aa-0.03□□□□□ -2.41
SCAF11-207ENST00000484275 FAM208BQ5VWN6 2430 aa-0.03□□□□□ -2.41
SCAF11-207ENST00000484275 FHAD1B1AJZ9 1412 aa-0.03□□□□□ -2.41
SCAF11-207ENST00000484275 SBF2Q86WG5 1849 aa-0.03□□□□□ -2.41
SCAF11-207ENST00000484275 PHLPP1O60346 1717 aa-0.03□□□□□ -2.41
SCAF11-207ENST00000484275 TSPAN19P0C672 248 aa-0.03□□□□□ -2.41
SCAF11-207ENST00000484275 ACYP2P14621 99 aa-0.03□□□□□ -2.41
SCAF11-207ENST00000484275 Q96NJ1 140 aa-0.03□□□□□ -2.41
SCAF11-207ENST00000484275 NDUFA12Q9UI09 145 aa-0.03□□□□□ -2.41
SCAF11-207ENST00000484275 U3KQA8 63 aa-0.03□□□□□ -2.41
SCAF11-207ENST00000484275 DCHS2Q6V1P9 2916 aa-0.03□□□□□ -2.41
SCAF11-207ENST00000484275 NHSL1Q5SYE7 1610 aa-0.03□□□□□ -2.41
SCAF11-207ENST00000484275 MAP1AP78559 2803 aaPredicted RBP-0.03□□□□□ -2.41
SCAF11-207ENST00000484275 CHD6Q8TD26 2715 aa-0.03□□□□□ -2.41
SCAF11-207ENST00000484275 MYCBP2O75592 4640 aa-0.03□□□□□ -2.41
SCAF11-207ENST00000484275 DOPEY2Q9Y3R5 2298 aa-0.03□□□□□ -2.41
SCAF11-207ENST00000484275 WNK2Q9Y3S1 2297 aa-0.03□□□□□ -2.41
SCAF11-207ENST00000484275 SPTBN4Q9H254 2564 aa-0.03□□□□□ -2.41
SCAF11-207ENST00000484275 ZANQ9Y493 2812 aa-0.04□□□□□ -2.42
SCAF11-207ENST00000484275 RNF213Q63HN8 5207 aa-0.04□□□□□ -2.42
SCAF11-207ENST00000484275 LRRC37A2A6NM11 1700 aa-0.04□□□□□ -2.42
SCAF11-207ENST00000484275 ARHGEF10O15013 1369 aa-0.04□□□□□ -2.42
SCAF11-207ENST00000484275 TMEM14DPA8MWL7 114 aa-0.04□□□□□ -2.42
SCAF11-207ENST00000484275 IFNA17P01571 189 aa-0.04□□□□□ -2.42
SCAF11-207ENST00000484275 INSL4Q14641 139 aa-0.04□□□□□ -2.42
SCAF11-207ENST00000484275 CTAGE3PQ8IX95 158 aa-0.04□□□□□ -2.42
SCAF11-207ENST00000484275 GSKIPQ9P0R6 139 aa-0.04□□□□□ -2.42
SCAF11-207ENST00000484275 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.04□□□□□ -2.42
SCAF11-207ENST00000484275 FOCADQ5VW36 1801 aa-0.04□□□□□ -2.42
SCAF11-207ENST00000484275 SONP18583 2426 aaKnown RBP-0.04□□□□□ -2.42
SCAF11-207ENST00000484275 BPTFQ12830 3046 aa-0.05□□□□□ -2.42
SCAF11-207ENST00000484275 FAM236AA0A1B0GUQ0 79 aa-0.05□□□□□ -2.42
SCAF11-207ENST00000484275 FAM236BA0A1B0GV22 79 aa-0.05□□□□□ -2.42
SCAF11-207ENST00000484275 J3QR89 54 aa-0.05□□□□□ -2.42
SCAF11-207ENST00000484275 IGLC6P0CF74 106 aa-0.05□□□□□ -2.42
SCAF11-207ENST00000484275 GCHFRP30047 84 aa-0.05□□□□□ -2.42
SCAF11-207ENST00000484275 CKS1BP61024 79 aa-0.05□□□□□ -2.42
SCAF11-207ENST00000484275 HIST1H1AQ02539 215 aaPredicted RBP-0.05□□□□□ -2.42
SCAF11-207ENST00000484275 MIC13Q5XKP0 118 aa-0.05□□□□□ -2.42
SCAF11-207ENST00000484275 RPL7L1Q6DKI1 246 aaKnown RBP-0.05□□□□□ -2.42
SCAF11-207ENST00000484275 SCIMPQ6UWF3 145 aa-0.05□□□□□ -2.42
SCAF11-207ENST00000484275 Q6ZRX8 168 aa-0.05□□□□□ -2.42
SCAF11-207ENST00000484275 Q6ZUT4 128 aa-0.05□□□□□ -2.42
SCAF11-207ENST00000484275 LZICQ8WZA0 190 aa-0.05□□□□□ -2.42
SCAF11-207ENST00000484275 BATF3Q9NR55 127 aa-0.05□□□□□ -2.42
SCAF11-207ENST00000484275 RPRMQ9NS64 109 aa-0.05□□□□□ -2.42
SCAF11-207ENST00000484275 RYR2Q92736 4967 aa-0.05□□□□□ -2.42
SCAF11-207ENST00000484275 ABCA13Q86UQ4 5058 aa-0.06□□□□□ -2.42
SCAF11-207ENST00000484275 IBTKQ9P2D0 1353 aaPredicted RBP-0.06□□□□□ -2.42
SCAF11-207ENST00000484275 PTPN13Q12923 2485 aa-0.06□□□□□ -2.42
SCAF11-207ENST00000484275 TRGV1A0A0A0MS02 117 aa-0.06□□□□□ -2.42
SCAF11-207ENST00000484275 ARPC5O15511 151 aa-0.06□□□□□ -2.42
SCAF11-207ENST00000484275 PIRTP0C851 137 aa-0.06□□□□□ -2.42
SCAF11-207ENST00000484275 PIPP12273 146 aaPredicted RBP-0.06□□□□□ -2.42
SCAF11-207ENST00000484275 UBE2D1P51668 147 aa-0.06□□□□□ -2.42
SCAF11-207ENST00000484275 EDDM3BP56851 147 aa-0.06□□□□□ -2.42
SCAF11-207ENST00000484275 C9orf116Q5BN46 136 aaPredicted RBP-0.06□□□□□ -2.42
SCAF11-207ENST00000484275 Q5VV11 94 aa-0.06□□□□□ -2.42
SCAF11-207ENST00000484275 PSMG3Q9BT73 122 aaPredicted RBP-0.06□□□□□ -2.42
SCAF11-207ENST00000484275 SMIM3Q9BZL3 60 aa-0.06□□□□□ -2.42
SCAF11-207ENST00000484275 PPRC1Q5VV67 1664 aaKnown RBP-0.06□□□□□ -2.42
SCAF11-207ENST00000484275 KIF21AQ7Z4S6 1674 aa-0.06□□□□□ -2.42
SCAF11-207ENST00000484275 ZNF609O15014 1411 aa-0.06□□□□□ -2.42
SCAF11-207ENST00000484275 RYR3Q15413 4870 aa-0.06□□□□□ -2.42
SCAF11-207ENST00000484275 HMCN2Q8NDA2 5059 aa-0.06□□□□□ -2.42
SCAF11-207ENST00000484275 ARAP2Q8WZ64 1704 aa-0.07□□□□□ -2.42
SCAF11-207ENST00000484275 UBR4Q5T4S7 5183 aa-0.07□□□□□ -2.42
SCAF11-207ENST00000484275 GRIN2AQ12879 1464 aa-0.07□□□□□ -2.42
SCAF11-207ENST00000484275 TRBV10-3A0A0K0K1G6 114 aa-0.07□□□□□ -2.42
SCAF11-207ENST00000484275 A6NIN4 97 aa-0.07□□□□□ -2.42
SCAF11-207ENST00000484275 APOC4-APOC2K7ER74 178 aa-0.07□□□□□ -2.42
SCAF11-207ENST00000484275 M0R129 80 aa-0.07□□□□□ -2.42
SCAF11-207ENST00000484275 M0R2Z0 102 aa-0.07□□□□□ -2.42
SCAF11-207ENST00000484275 PIN1P1O15428 100 aa-0.07□□□□□ -2.42
SCAF11-207ENST00000484275 RRAS2P62070 204 aaPredicted RBP-0.07□□□□□ -2.42
SCAF11-207ENST00000484275 ZNF818PQ6ZRF7 136 aa-0.07□□□□□ -2.42
SCAF11-207ENST00000484275 UBE2DNLQ8IWF7 75 aa-0.07□□□□□ -2.42
SCAF11-207ENST00000484275 C10orf82Q8WW14 230 aa-0.07□□□□□ -2.42
SCAF11-207ENST00000484275 WFDC6Q9BQY6 131 aa-0.07□□□□□ -2.42
SCAF11-207ENST00000484275 COPZ2Q9P299 210 aa-0.07□□□□□ -2.42
SCAF11-207ENST00000484275 SHROOM2Q13796 1616 aa-0.07□□□□□ -2.42
SCAF11-207ENST00000484275 HIVEP1P15822 2718 aa-0.07□□□□□ -2.42
SCAF11-207ENST00000484275 TSC2P49815 1807 aa-0.08□□□□□ -2.42
SCAF11-207ENST00000484275 PSME4Q14997 1843 aa-0.08□□□□□ -2.42
SCAF11-207ENST00000484275 ZNF236Q9UL36 1845 aa-0.08□□□□□ -2.42
SCAF11-207ENST00000484275 RIF1Q5UIP0 2472 aaKnown RBP-0.08□□□□□ -2.42
SCAF11-207ENST00000484275 ZNF518AQ6AHZ1 1483 aa-0.08□□□□□ -2.42
SCAF11-207ENST00000484275 BSNQ9UPA5 3926 aa-0.08□□□□□ -2.42
SCAF11-207ENST00000484275 TENM2Q9NT68 2774 aa-0.08□□□□□ -2.42
SCAF11-207ENST00000484275 TRAV1-2A0A0B4J238 106 aa-0.08□□□□□ -2.42
SCAF11-207ENST00000484275 CLPSL1A2RUU4 121 aa-0.08□□□□□ -2.42
SCAF11-207ENST00000484275 ZNF815PA8K554 130 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms