RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 SCO1O75880 301 aa6.8□□□□□ -1.32
CPSF4-213ENST00000484112 DNAH10OSP0CZ25 163 aa6.8□□□□□ -1.32
CPSF4-213ENST00000484112 CEBPGP53567 150 aa6.8□□□□□ -1.32
CPSF4-213ENST00000484112 FOXA3P55318 350 aaPredicted RBP6.8□□□□□ -1.32
CPSF4-213ENST00000484112 ERVFC1-1P60608 527 aa6.8□□□□□ -1.32
CPSF4-213ENST00000484112 RPL36AP83881 106 aaKnown RBP6.8□□□□□ -1.32
CPSF4-213ENST00000484112 TMEM241Q24JQ0 296 aa6.8□□□□□ -1.32
CPSF4-213ENST00000484112 LELP1Q5T871 98 aa6.8□□□□□ -1.32
CPSF4-213ENST00000484112 Q5VSD8 79 aa6.8□□□□□ -1.32
CPSF4-213ENST00000484112 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.8□□□□□ -1.32
CPSF4-213ENST00000484112 FRZBQ92765 325 aa6.8□□□□□ -1.32
CPSF4-213ENST00000484112 RPL36ALQ969Q0 106 aaKnown RBP6.8□□□□□ -1.32
CPSF4-213ENST00000484112 GFRA4Q9GZZ7 299 aa6.8□□□□□ -1.32
CPSF4-213ENST00000484112 RNASE7Q9H1E1 156 aaKnown RBP6.8□□□□□ -1.32
CPSF4-213ENST00000484112 OSTCQ9NRP0 149 aa6.8□□□□□ -1.32
CPSF4-213ENST00000484112 PGPEP1Q9NXJ5 209 aa6.8□□□□□ -1.32
CPSF4-213ENST00000484112 TRBV7-3A0A075B6L6 115 aa6.79□□□□□ -1.32
CPSF4-213ENST00000484112 LOC100131303A0A0U1RQF7 123 aa6.79□□□□□ -1.32
CPSF4-213ENST00000484112 EVI2AP22794 236 aa6.79□□□□□ -1.32
CPSF4-213ENST00000484112 XGP55808 180 aa6.79□□□□□ -1.32
CPSF4-213ENST00000484112 LYZL1Q6UWQ5 148 aa6.79□□□□□ -1.32
CPSF4-213ENST00000484112 Q6ZSN1 163 aa6.79□□□□□ -1.32
CPSF4-213ENST00000484112 C15orf54Q8N8G6 183 aa6.79□□□□□ -1.32
CPSF4-213ENST00000484112 CLRN3Q8NCR9 226 aa6.79□□□□□ -1.32
CPSF4-213ENST00000484112 TPPP3Q9BW30 176 aa6.79□□□□□ -1.32
CPSF4-213ENST00000484112 NAT8Q9UHE5 227 aa6.79□□□□□ -1.32
CPSF4-213ENST00000484112 KIF25-AS1Q9Y6Z4 181 aa6.79□□□□□ -1.32
CPSF4-213ENST00000484112 IGHV3-38A0A0C4DH36 116 aa6.78□□□□□ -1.32
CPSF4-213ENST00000484112 GAGE12JA6NER3 117 aa6.78□□□□□ -1.32
CPSF4-213ENST00000484112 GZMBP10144 247 aa6.78□□□□□ -1.32
CPSF4-213ENST00000484112 NTF3P20783 257 aa6.78□□□□□ -1.32
CPSF4-213ENST00000484112 GAGE1Q13065 139 aa6.78□□□□□ -1.32
CPSF4-213ENST00000484112 GAGE4Q13068 117 aa6.78□□□□□ -1.32
CPSF4-213ENST00000484112 GAGE5Q13069 117 aa6.78□□□□□ -1.32
CPSF4-213ENST00000484112 RHEBQ15382 184 aa6.78□□□□□ -1.32
CPSF4-213ENST00000484112 ZNF56Q15929 161 aa6.78□□□□□ -1.32
CPSF4-213ENST00000484112 GAGE13Q4V321 117 aa6.78□□□□□ -1.32
CPSF4-213ENST00000484112 TMEM97Q5BJF2 176 aa6.78□□□□□ -1.32
CPSF4-213ENST00000484112 LINC01556Q5JQF7 62 aa6.78□□□□□ -1.32
CPSF4-213ENST00000484112 NFE4Q86UQ8 179 aa6.78□□□□□ -1.32
CPSF4-213ENST00000484112 C14orf178Q8N769 122 aaPredicted RBP6.78□□□□□ -1.32
CPSF4-213ENST00000484112 TSKUQ8WUA8 353 aa6.78□□□□□ -1.32
CPSF4-213ENST00000484112 BORCS7Q96B45 105 aa6.78□□□□□ -1.32
CPSF4-213ENST00000484112 DNAJC30Q96LL9 226 aa6.78□□□□□ -1.32
CPSF4-213ENST00000484112 DPH3P1Q9H4G8 78 aa6.78□□□□□ -1.32
CPSF4-213ENST00000484112 TNFRSF18Q9Y5U5 241 aa6.78□□□□□ -1.32
CPSF4-213ENST00000484112 F5H697 171 aa6.77□□□□□ -1.33
CPSF4-213ENST00000484112 SMR3BP02814 79 aaPredicted RBP6.77□□□□□ -1.33
CPSF4-213ENST00000484112 UBE2D3P61077 147 aa6.77□□□□□ -1.33
CPSF4-213ENST00000484112 UBE2D2P62837 147 aa6.77□□□□□ -1.33
CPSF4-213ENST00000484112 PNRC1Q12796 327 aaPredicted RBP6.77□□□□□ -1.33
CPSF4-213ENST00000484112 OR10J3Q5JRS4 329 aa6.77□□□□□ -1.33
CPSF4-213ENST00000484112 Q6ZRN7 208 aaPredicted RBP6.77□□□□□ -1.33
CPSF4-213ENST00000484112 SMIM15Q7Z3B0 74 aa6.77□□□□□ -1.33
CPSF4-213ENST00000484112 ISOC2Q96AB3 205 aa6.77□□□□□ -1.33
CPSF4-213ENST00000484112 MUC21A0A0G2JKD1 596 aa6.76□□□□□ -1.33
CPSF4-213ENST00000484112 MUC21A0A140T8X8 626 aa6.76□□□□□ -1.33
CPSF4-213ENST00000484112 KRTAP10-1P60331 282 aa6.76□□□□□ -1.33
CPSF4-213ENST00000484112 PKIAP61925 76 aa6.76□□□□□ -1.33
CPSF4-213ENST00000484112 RPL23P62829 140 aaKnown RBP6.76□□□□□ -1.33
CPSF4-213ENST00000484112 TWIST1Q15672 202 aa6.76□□□□□ -1.33
CPSF4-213ENST00000484112 DAZ4Q86SG3 579 aaKnown RBP6.76□□□□□ -1.33
CPSF4-213ENST00000484112 WFDC10BQ8IUB3 73 aa6.76□□□□□ -1.33
CPSF4-213ENST00000484112 GTSF1Q8WW33 167 aa6.76□□□□□ -1.33
CPSF4-213ENST00000484112 CHCHD7Q9BUK0 85 aa6.76□□□□□ -1.33
CPSF4-213ENST00000484112 DAZ3Q9NR90 486 aaKnown RBP6.76□□□□□ -1.33
CPSF4-213ENST00000484112 C7orf77A4D0Y5 90 aa6.75□□□□□ -1.33
CPSF4-213ENST00000484112 M0QY20 66 aa6.75□□□□□ -1.33
CPSF4-213ENST00000484112 LAGE3Q14657 143 aa6.75□□□□□ -1.33
CPSF4-213ENST00000484112 CDPF1Q6NVV7 123 aa6.75□□□□□ -1.33
CPSF4-213ENST00000484112 NEXN-AS1Q8NBZ9 246 aa6.75□□□□□ -1.33
CPSF4-213ENST00000484112 SMCO4Q9NRQ5 59 aa6.75□□□□□ -1.33
CPSF4-213ENST00000484112 MSRB1Q9NZV6 116 aa6.75□□□□□ -1.33
CPSF4-213ENST00000484112 A0A1B0GUT8 65 aa6.74□□□□□ -1.33
CPSF4-213ENST00000484112 HIGD1CA8MV81 97 aa6.74□□□□□ -1.33
CPSF4-213ENST00000484112 SSTP61278 116 aa6.74□□□□□ -1.33
CPSF4-213ENST00000484112 HAMPP81172 84 aa6.74□□□□□ -1.33
CPSF4-213ENST00000484112 ADIRFQ15847 76 aa6.74□□□□□ -1.33
CPSF4-213ENST00000484112 RASL11AQ6T310 242 aa6.74□□□□□ -1.33
CPSF4-213ENST00000484112 NAT8BQ9UHF3 227 aa6.74□□□□□ -1.33
CPSF4-213ENST00000484112 V9GYV3 84 aa6.74□□□□□ -1.33
CPSF4-213ENST00000484112 A0A087WTM6 91 aa6.73□□□□□ -1.33
CPSF4-213ENST00000484112 TRBV6-8A0A0A6YYG3 113 aa6.73□□□□□ -1.33
CPSF4-213ENST00000484112 A0A1B0GW15 77 aa6.73□□□□□ -1.33
CPSF4-213ENST00000484112 IBA57-AS1B1ANH7 110 aa6.73□□□□□ -1.33
CPSF4-213ENST00000484112 FAM229AH3BQW9 127 aa6.73□□□□□ -1.33
CPSF4-213ENST00000484112 J3QL48 77 aa6.73□□□□□ -1.33
CPSF4-213ENST00000484112 MGPP08493 103 aa6.73□□□□□ -1.33
CPSF4-213ENST00000484112 ELOBQ15370 118 aa6.73□□□□□ -1.33
CPSF4-213ENST00000484112 SUMO4Q6EEV6 95 aa6.73□□□□□ -1.33
CPSF4-213ENST00000484112 KCNIP4Q6PIL6 250 aa6.73□□□□□ -1.33
CPSF4-213ENST00000484112 PGLYRP4Q96LB8 373 aa6.73□□□□□ -1.33
CPSF4-213ENST00000484112 NIT2Q9NQR4 276 aa6.73□□□□□ -1.33
CPSF4-213ENST00000484112 TMEM242Q9NWH2 141 aa6.73□□□□□ -1.33
CPSF4-213ENST00000484112 Q9UF83 564 aa6.73□□□□□ -1.33
CPSF4-213ENST00000484112 URGCP-MRPS24S4R325 110 aa6.73□□□□□ -1.33
CPSF4-213ENST00000484112 FAT1Q14517 4588 aa6.73□□□□□ -1.33
CPSF4-213ENST00000484112 PPP1R2P9O14990 202 aa6.72□□□□□ -1.33
CPSF4-213ENST00000484112 GCSHP23434 173 aa6.72□□□□□ -1.33
CPSF4-213ENST00000484112 RIGQ13278 110 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms