RNA–Protein interactions for RNA: ENST00000482229.1

NEPRO-216, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 2

Gene NEPRO, Length 814 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-216ENST00000482229 PRELID3AQ96N28 172 aa0.38□□□□□ -2.35
NEPRO-216ENST00000482229 AP1S3Q96PC3 154 aa0.38□□□□□ -2.35
NEPRO-216ENST00000482229 CCDC32Q9BV29 185 aa0.38□□□□□ -2.35
NEPRO-216ENST00000482229 PCBD2Q9H0N5 130 aa0.38□□□□□ -2.35
NEPRO-216ENST00000482229 FKBP11Q9NYL4 201 aa0.38□□□□□ -2.35
NEPRO-216ENST00000482229 LAMTOR2Q9Y2Q5 125 aa0.38□□□□□ -2.35
NEPRO-216ENST00000482229 EFCAB5A4FU69 1503 aa0.38□□□□□ -2.35
NEPRO-216ENST00000482229 TECPR2O15040 1411 aa0.38□□□□□ -2.35
NEPRO-216ENST00000482229 ARHGAP31Q2M1Z3 1444 aa0.38□□□□□ -2.35
NEPRO-216ENST00000482229 PLXNA1Q9UIW2 1896 aa0.37□□□□□ -2.35
NEPRO-216ENST00000482229 A2ML1A8K2U0 1454 aa0.37□□□□□ -2.35
NEPRO-216ENST00000482229 NKTRP30414 1462 aaKnown RBP0.37□□□□□ -2.35
NEPRO-216ENST00000482229 MYLKQ15746 1914 aa0.37□□□□□ -2.35
NEPRO-216ENST00000482229 BBIP1A8MTZ0 92 aa0.37□□□□□ -2.35
NEPRO-216ENST00000482229 H7BYZ3 331 aa0.37□□□□□ -2.35
NEPRO-216ENST00000482229 BCL2P10415 239 aa0.37□□□□□ -2.35
NEPRO-216ENST00000482229 PDE6GP18545 87 aa0.37□□□□□ -2.35
NEPRO-216ENST00000482229 MT4P47944 62 aa0.37□□□□□ -2.35
NEPRO-216ENST00000482229 FXYD6P3P58550 94 aa0.37□□□□□ -2.35
NEPRO-216ENST00000482229 SNRPD3P62318 126 aaKnown RBP0.37□□□□□ -2.35
NEPRO-216ENST00000482229 KRTAP21-1Q3LI58 79 aa0.37□□□□□ -2.35
NEPRO-216ENST00000482229 LINC00305Q7Z4B0 112 aa0.37□□□□□ -2.35
NEPRO-216ENST00000482229 CLEC2BQ92478 149 aa0.37□□□□□ -2.35
NEPRO-216ENST00000482229 AHCTF1Q8WYP5 2266 aa0.37□□□□□ -2.35
NEPRO-216ENST00000482229 XRN1Q8IZH2 1706 aaKnown RBP0.37□□□□□ -2.35
NEPRO-216ENST00000482229 IFT172Q9UG01 1749 aa0.37□□□□□ -2.35
NEPRO-216ENST00000482229 PKD1P98161 4303 aa0.37□□□□□ -2.35
NEPRO-216ENST00000482229 CLIP1P30622 1438 aa0.37□□□□□ -2.35
NEPRO-216ENST00000482229 DYNC1H1Q14204 4646 aaKnown RBP0.37□□□□□ -2.35
NEPRO-216ENST00000482229 UBR2Q8IWV8 1755 aa0.37□□□□□ -2.35
NEPRO-216ENST00000482229 QRICH2Q9H0J4 1663 aa0.37□□□□□ -2.35
NEPRO-216ENST00000482229 UHRF1BP1LA0JNW5 1464 aa0.36□□□□□ -2.35
NEPRO-216ENST00000482229 TRRAPQ9Y4A5 3859 aa0.36□□□□□ -2.35
NEPRO-216ENST00000482229 PRH1P02810 166 aa0.36□□□□□ -2.35
NEPRO-216ENST00000482229 CCL4P13236 92 aa0.36□□□□□ -2.35
NEPRO-216ENST00000482229 QRFPP83859 136 aa0.36□□□□□ -2.35
NEPRO-216ENST00000482229 HRCT1Q6UXD1 115 aa0.36□□□□□ -2.35
NEPRO-216ENST00000482229 C3orf62Q6ZUJ4 267 aa0.36□□□□□ -2.35
NEPRO-216ENST00000482229 C10orf111Q8N326 155 aa0.36□□□□□ -2.35
NEPRO-216ENST00000482229 TMEM229BQ8NBD8 167 aa0.36□□□□□ -2.35
NEPRO-216ENST00000482229 CCL4L1Q8NHW4 92 aa0.36□□□□□ -2.35
NEPRO-216ENST00000482229 CIB3Q96Q77 187 aaPredicted RBP0.36□□□□□ -2.35
NEPRO-216ENST00000482229 JPT1Q9UK76 154 aa0.36□□□□□ -2.35
NEPRO-216ENST00000482229 MUC22E2RYF6 1773 aaPredicted RBP0.36□□□□□ -2.35
NEPRO-216ENST00000482229 COL14A1Q05707 1796 aaKnown RBP0.36□□□□□ -2.35
NEPRO-216ENST00000482229 FANCMQ8IYD8 2048 aa0.36□□□□□ -2.35
NEPRO-216ENST00000482229 CLTCQ00610 1675 aaKnown RBP0.36□□□□□ -2.35
NEPRO-216ENST00000482229 SBF2Q86WG5 1849 aa0.36□□□□□ -2.35
NEPRO-216ENST00000482229 ARFGEF1Q9Y6D6 1849 aa0.36□□□□□ -2.35
NEPRO-216ENST00000482229 DNAH9Q9NYC9 4486 aa0.36□□□□□ -2.35
NEPRO-216ENST00000482229 NRAPQ86VF7 1730 aa0.35□□□□□ -2.35
NEPRO-216ENST00000482229 LRRIQ1Q96JM4 1722 aa0.35□□□□□ -2.35
NEPRO-216ENST00000482229 MBD5Q9P267 1494 aa0.35□□□□□ -2.35
NEPRO-216ENST00000482229 TRPM1Q7Z4N2 1603 aa0.35□□□□□ -2.35
NEPRO-216ENST00000482229 MROH1Q8NDA8 1641 aa0.35□□□□□ -2.35
NEPRO-216ENST00000482229 ABCC3O15438 1527 aa0.35□□□□□ -2.35
NEPRO-216ENST00000482229 ATP7AQ04656 1500 aa0.35□□□□□ -2.35
NEPRO-216ENST00000482229 ERICH3Q5RHP9 1530 aa0.35□□□□□ -2.35
NEPRO-216ENST00000482229 CMYA5Q8N3K9 4069 aa0.35□□□□□ -2.35
NEPRO-216ENST00000482229 A0A1W2PRE2 83 aa0.35□□□□□ -2.35
NEPRO-216ENST00000482229 RPS3P23396 243 aaKnown RBP eCLIP0.35□□□□□ -2.35
NEPRO-216ENST00000482229 CAV3P56539 151 aa0.35□□□□□ -2.35
NEPRO-216ENST00000482229 MAXP61244 160 aa0.35□□□□□ -2.35
NEPRO-216ENST00000482229 TMEM78Q5T7P6 136 aa0.35□□□□□ -2.35
NEPRO-216ENST00000482229 NABP2Q9BQ15 211 aa0.35□□□□□ -2.35
NEPRO-216ENST00000482229 LPAR5Q9H1C0 372 aa0.35□□□□□ -2.35
NEPRO-216ENST00000482229 ATPIF1Q9UII2 106 aa0.35□□□□□ -2.35
NEPRO-216ENST00000482229 TRAPPC2LQ9UL33 140 aa0.35□□□□□ -2.35
NEPRO-216ENST00000482229 SMG6Q86US8 1419 aaKnown RBP0.35□□□□□ -2.35
NEPRO-216ENST00000482229 KIAA1107Q9UPP5 1409 aa0.35□□□□□ -2.35
NEPRO-216ENST00000482229 ABCC8Q09428 1581 aa0.35□□□□□ -2.35
NEPRO-216ENST00000482229 QSER1Q2KHR3 1735 aa0.35□□□□□ -2.35
NEPRO-216ENST00000482229 DDX60Q8IY21 1712 aaKnown RBP0.35□□□□□ -2.35
NEPRO-216ENST00000482229 ATP7BP35670 1465 aa0.35□□□□□ -2.35
NEPRO-216ENST00000482229 EIF2AK4Q9P2K8 1649 aaKnown RBP0.35□□□□□ -2.35
NEPRO-216ENST00000482229 CADP27708 2225 aa0.34□□□□□ -2.35
NEPRO-216ENST00000482229 ASXL3Q9C0F0 2248 aa0.34□□□□□ -2.35
NEPRO-216ENST00000482229 ZGRF1Q86YA3 2104 aa0.34□□□□□ -2.35
NEPRO-216ENST00000482229 PLECQ15149 4684 aaKnown RBP0.34□□□□□ -2.35
NEPRO-216ENST00000482229 TRAV13-1A0A0B4J241 112 aa0.34□□□□□ -2.36
NEPRO-216ENST00000482229 A0A1W2PPB8 328 aa0.34□□□□□ -2.36
NEPRO-216ENST00000482229 A0A1W2PRS3 328 aa0.34□□□□□ -2.36
NEPRO-216ENST00000482229 ARL5CA6NH57 179 aa0.34□□□□□ -2.36
NEPRO-216ENST00000482229 KIR3DP1A8MWS1 328 aa0.34□□□□□ -2.36
NEPRO-216ENST00000482229 H3BMG7 143 aa0.34□□□□□ -2.36
NEPRO-216ENST00000482229 PLXNC1O60486 1568 aa0.34□□□□□ -2.36
NEPRO-216ENST00000482229 IGHV3-30P01768 117 aa0.34□□□□□ -2.36
NEPRO-216ENST00000482229 IGHV3-30-5P0DP03 117 aa0.34□□□□□ -2.36
NEPRO-216ENST00000482229 SPRR2EP22531 72 aa0.34□□□□□ -2.36
NEPRO-216ENST00000482229 SPRR2DP22532 72 aa0.34□□□□□ -2.36
NEPRO-216ENST00000482229 SPRR2BP35325 72 aa0.34□□□□□ -2.36
NEPRO-216ENST00000482229 SPRR2AP35326 72 aa0.34□□□□□ -2.36
NEPRO-216ENST00000482229 PRDM2Q13029 1718 aa0.34□□□□□ -2.36
NEPRO-216ENST00000482229 CSAG1Q6PB30 78 aa0.34□□□□□ -2.36
NEPRO-216ENST00000482229 ARAP2Q8WZ64 1704 aa0.34□□□□□ -2.36
NEPRO-216ENST00000482229 LXNQ9BS40 222 aa0.34□□□□□ -2.36
NEPRO-216ENST00000482229 FAM103A1Q9BTL3 118 aaKnown RBP0.34□□□□□ -2.36
NEPRO-216ENST00000482229 FAT2Q9NYQ8 4349 aa0.34□□□□□ -2.36
NEPRO-216ENST00000482229 MYH2Q9UKX2 1941 aa0.34□□□□□ -2.36
NEPRO-216ENST00000482229 DSPPQ9NZW4 1301 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms