RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 C16orf90A8MZG2 172 aa13.64□□□□□ -0.23
VPS36-204ENST00000480923 ATP6V1G1O75348 118 aa13.64□□□□□ -0.23
VPS36-204ENST00000480923 GZMBP10144 247 aa13.64□□□□□ -0.23
VPS36-204ENST00000480923 LINC01556Q5JQF7 62 aa13.64□□□□□ -0.23
VPS36-204ENST00000480923 TPPP3Q9BW30 176 aa13.64□□□□□ -0.23
VPS36-204ENST00000480923 CTDSP1Q9GZU7 261 aa13.64□□□□□ -0.23
VPS36-204ENST00000480923 V9GYV3 84 aa13.64□□□□□ -0.23
VPS36-204ENST00000480923 C7orf77A4D0Y5 90 aa13.63□□□□□ -0.23
VPS36-204ENST00000480923 S100A1P23297 94 aa13.63□□□□□ -0.23
VPS36-204ENST00000480923 ZNF56Q15929 161 aa13.63□□□□□ -0.23
VPS36-204ENST00000480923 SPATA12Q7Z6I5 190 aa13.63□□□□□ -0.23
VPS36-204ENST00000480923 IGHV3-30P01768 117 aa13.62□□□□□ -0.23
VPS36-204ENST00000480923 IGHV3-33P01772 117 aa13.62□□□□□ -0.23
VPS36-204ENST00000480923 IGHV3-30-3P0DP02 117 aa13.62□□□□□ -0.23
VPS36-204ENST00000480923 IGHV3-30-5P0DP03 117 aa13.62□□□□□ -0.23
VPS36-204ENST00000480923 FER1L6-AS1Q8NA97 138 aa13.62□□□□□ -0.23
VPS36-204ENST00000480923 TSKUQ8WUA8 353 aa13.62□□□□□ -0.23
VPS36-204ENST00000480923 RPS10P5Q9NQ39 176 aa13.62□□□□□ -0.23
VPS36-204ENST00000480923 A0A087WWC5 75 aa13.61□□□□□ -0.23
VPS36-204ENST00000480923 TRBV10-1A0A0K0K1A3 114 aa13.61□□□□□ -0.23
VPS36-204ENST00000480923 RPL36AP83881 106 aaKnown RBP13.61□□□□□ -0.23
VPS36-204ENST00000480923 RPL36ALQ969Q0 106 aaKnown RBP13.61□□□□□ -0.23
VPS36-204ENST00000480923 FAM231BA6NCW3 169 aa13.6□□□□□ -0.23
VPS36-204ENST00000480923 SMIM17P0DL12 118 aa13.6□□□□□ -0.23
VPS36-204ENST00000480923 RAB4BP61018 213 aa13.6□□□□□ -0.23
VPS36-204ENST00000480923 AP1S3Q96PC3 154 aa13.6□□□□□ -0.23
VPS36-204ENST00000480923 GFRA4Q9GZZ7 299 aa13.6□□□□□ -0.23
VPS36-204ENST00000480923 TMEM242Q9NWH2 141 aa13.6□□□□□ -0.23
VPS36-204ENST00000480923 F5H697 171 aa13.59□□□□□ -0.23
VPS36-204ENST00000480923 EREGO14944 169 aa13.59□□□□□ -0.23
VPS36-204ENST00000480923 IGLC6P0CF74 106 aa13.59□□□□□ -0.23
VPS36-204ENST00000480923 TRBV7-3A0A075B6L6 115 aa13.57□□□□□ -0.24
VPS36-204ENST00000480923 SMIM27A0A1W2PRY6 76 aa13.57□□□□□ -0.24
VPS36-204ENST00000480923 IBA57-AS1B1ANH7 110 aa13.57□□□□□ -0.24
VPS36-204ENST00000480923 F2Z2F3 143 aa13.57□□□□□ -0.24
VPS36-204ENST00000480923 FOXA3P55318 350 aaPredicted RBP13.57□□□□□ -0.24
VPS36-204ENST00000480923 KRTAP10-2P60368 255 aa13.57□□□□□ -0.24
VPS36-204ENST00000480923 CACNG7P62955 275 aa13.57□□□□□ -0.24
VPS36-204ENST00000480923 GTSF1Q8WW33 167 aa13.57□□□□□ -0.24
VPS36-204ENST00000480923 IMMP2LQ96T52 175 aa13.57□□□□□ -0.24
VPS36-204ENST00000480923 Q9HAA7 133 aa13.57□□□□□ -0.24
VPS36-204ENST00000480923 NAT8BQ9UHF3 227 aa13.57□□□□□ -0.24
VPS36-204ENST00000480923 HIGD1CA8MV81 97 aa13.56□□□□□ -0.24
VPS36-204ENST00000480923 UBE2D3P61077 147 aa13.56□□□□□ -0.24
VPS36-204ENST00000480923 UBE2D2P62837 147 aa13.56□□□□□ -0.24
VPS36-204ENST00000480923 PSCAO43653 123 aa13.55□□□□□ -0.24
VPS36-204ENST00000480923 KCNIP4Q6PIL6 250 aa13.55□□□□□ -0.24
VPS36-204ENST00000480923 ATRAIDQ6UW56 229 aa13.55□□□□□ -0.24
VPS36-204ENST00000480923 LYZL1Q6UWQ5 148 aa13.55□□□□□ -0.24
VPS36-204ENST00000480923 Q8N3U1 123 aa13.55□□□□□ -0.24
VPS36-204ENST00000480923 NEXN-AS1Q8NBZ9 246 aa13.55□□□□□ -0.24
VPS36-204ENST00000480923 KIF25-AS1Q9Y6Z4 181 aa13.55□□□□□ -0.24
VPS36-204ENST00000480923 MGPP08493 103 aa13.54□□□□□ -0.24
VPS36-204ENST00000480923 S100PP25815 95 aa13.54□□□□□ -0.24
VPS36-204ENST00000480923 CTRLP40313 264 aa13.54□□□□□ -0.24
VPS36-204ENST00000480923 BORCS7Q96B45 105 aa13.54□□□□□ -0.24
VPS36-204ENST00000480923 PGLYRP4Q96LB8 373 aa13.54□□□□□ -0.24
VPS36-204ENST00000480923 A0A087WTM6 91 aa13.53□□□□□ -0.24
VPS36-204ENST00000480923 WDR73Q6P4I2 378 aa13.53□□□□□ -0.24
VPS36-204ENST00000480923 NUP35Q8NFH5 326 aa13.53□□□□□ -0.24
VPS36-204ENST00000480923 URGCP-MRPS24S4R325 110 aa13.53□□□□□ -0.24
VPS36-204ENST00000480923 DAZ4Q86SG3 579 aaKnown RBP13.52□□□□□ -0.25
VPS36-204ENST00000480923 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.52□□□□□ -0.25
VPS36-204ENST00000480923 DAZ3Q9NR90 486 aaKnown RBP13.52□□□□□ -0.25
VPS36-204ENST00000480923 TRGC1P0CF51 173 aa13.51□□□□□ -0.25
VPS36-204ENST00000480923 LAGE3Q14657 143 aa13.51□□□□□ -0.25
VPS36-204ENST00000480923 NIT1Q86X76 327 aa13.51□□□□□ -0.25
VPS36-204ENST00000480923 SMCO4Q9NRQ5 59 aa13.51□□□□□ -0.25
VPS36-204ENST00000480923 A0A1B0GUT8 65 aa13.5□□□□□ -0.25
VPS36-204ENST00000480923 NTF3P20783 257 aa13.5□□□□□ -0.25
VPS36-204ENST00000480923 CNFNQ9BYD5 112 aa13.5□□□□□ -0.25
VPS36-204ENST00000480923 PGPEP1Q9NXJ5 209 aa13.5□□□□□ -0.25
VPS36-204ENST00000480923 LRP1BQ9NZR2 4599 aa13.5□□□□□ -0.25
VPS36-204ENST00000480923 RYR1P21817 5038 aa13.49□□□□□ -0.25
VPS36-204ENST00000480923 TRAV9-1A0A075B6T8 112 aa13.49□□□□□ -0.25
VPS36-204ENST00000480923 FUSP35637 526 aaKnown RBP eCLIP13.49□□□□□ -0.25
VPS36-204ENST00000480923 RIGQ13278 110 aa13.49□□□□□ -0.25
VPS36-204ENST00000480923 BTF3L4Q96K17 158 aa13.49□□□□□ -0.25
VPS36-204ENST00000480923 A0A087WX48 190 aa13.48□□□□□ -0.25
VPS36-204ENST00000480923 TRBV6-8A0A0A6YYG3 113 aa13.48□□□□□ -0.25
VPS36-204ENST00000480923 H7C1H1 209 aa13.48□□□□□ -0.25
VPS36-204ENST00000480923 SUMO4Q6EEV6 95 aa13.48□□□□□ -0.25
VPS36-204ENST00000480923 DPH3P1Q9H4G8 78 aa13.48□□□□□ -0.25
VPS36-204ENST00000480923 TRAV8-3A0A0A6YYJ7 113 aa13.47□□□□□ -0.25
VPS36-204ENST00000480923 TWIST1Q15672 202 aa13.47□□□□□ -0.25
VPS36-204ENST00000480923 TM2D2Q9BX73 214 aa13.47□□□□□ -0.25
VPS36-204ENST00000480923 A0A1B0GW15 77 aa13.46□□□□□ -0.25
VPS36-204ENST00000480923 TMEM262E9PQX1 116 aa13.46□□□□□ -0.25
VPS36-204ENST00000480923 M0QY20 66 aa13.46□□□□□ -0.25
VPS36-204ENST00000480923 CDK2AP2O75956 126 aa13.46□□□□□ -0.25
VPS36-204ENST00000480923 CDPF1Q6NVV7 123 aa13.46□□□□□ -0.25
VPS36-204ENST00000480923 ATP5L2Q7Z4Y8 100 aa13.46□□□□□ -0.25
VPS36-204ENST00000480923 CHCHD7Q9BUK0 85 aa13.46□□□□□ -0.25
VPS36-204ENST00000480923 TMEM97Q5BJF2 176 aa13.45□□□□□ -0.26
VPS36-204ENST00000480923 MRPL54Q6P161 138 aaKnown RBP13.45□□□□□ -0.26
VPS36-204ENST00000480923 SMIM15Q7Z3B0 74 aa13.45□□□□□ -0.26
VPS36-204ENST00000480923 CBLN2Q8IUK8 224 aa13.45□□□□□ -0.26
VPS36-204ENST00000480923 DNAJC30Q96LL9 226 aa13.45□□□□□ -0.26
VPS36-204ENST00000480923 KLK12Q9UKR0 248 aa13.45□□□□□ -0.26
VPS36-204ENST00000480923 DNAH5Q8TE73 4624 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 186.7 ms