RNA–Protein interactions for RNA: ENST00000478696.5

GARNL3-214, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-214ENST00000478696 CYP4F30PQ9H0H9 118 aa0.95□□□□□ -2.26
GARNL3-214ENST00000478696 BET1LQ9NYM9 111 aa0.95□□□□□ -2.26
GARNL3-214ENST00000478696 TECTAO75443 2155 aa0.95□□□□□ -2.26
GARNL3-214ENST00000478696 MED13Q9UHV7 2174 aa0.95□□□□□ -2.26
GARNL3-214ENST00000478696 MADDQ8WXG6 1647 aa0.95□□□□□ -2.26
GARNL3-214ENST00000478696 CNTLNQ9NXG0 1405 aa0.95□□□□□ -2.26
GARNL3-214ENST00000478696 MUC6Q6W4X9 2439 aa0.95□□□□□ -2.26
GARNL3-214ENST00000478696 A0A0C4DFX4 3053 aa0.95□□□□□ -2.26
GARNL3-214ENST00000478696 TRPM7Q96QT4 1865 aa0.95□□□□□ -2.26
GARNL3-214ENST00000478696 CLASP1Q7Z460 1538 aa0.94□□□□□ -2.26
GARNL3-214ENST00000478696 ABCC10Q5T3U5 1492 aa0.94□□□□□ -2.26
GARNL3-214ENST00000478696 ABCA4P78363 2273 aa0.94□□□□□ -2.26
GARNL3-214ENST00000478696 RAPGEF6Q8TEU7 1601 aa0.94□□□□□ -2.26
GARNL3-214ENST00000478696 ATG2AQ2TAZ0 1938 aa0.94□□□□□ -2.26
GARNL3-214ENST00000478696 NCR3O14931 201 aa0.94□□□□□ -2.26
GARNL3-214ENST00000478696 UBE2D1P51668 147 aa0.94□□□□□ -2.26
GARNL3-214ENST00000478696 CAV3P56539 151 aa0.94□□□□□ -2.26
GARNL3-214ENST00000478696 SSBP1Q04837 148 aaKnown RBP0.94□□□□□ -2.26
GARNL3-214ENST00000478696 C20orf197Q8N268 126 aa0.94□□□□□ -2.26
GARNL3-214ENST00000478696 CCL19Q99731 98 aa0.94□□□□□ -2.26
GARNL3-214ENST00000478696 LINC00312Q9Y6C7 94 aa0.94□□□□□ -2.26
GARNL3-214ENST00000478696 LAMC3Q9Y6N6 1575 aa0.94□□□□□ -2.26
GARNL3-214ENST00000478696 ANK1P16157 1881 aa0.94□□□□□ -2.26
GARNL3-214ENST00000478696 SIP14410 1827 aa0.94□□□□□ -2.26
GARNL3-214ENST00000478696 ZGRF1Q86YA3 2104 aa0.94□□□□□ -2.26
GARNL3-214ENST00000478696 UTRNP46939 3433 aa0.93□□□□□ -2.26
GARNL3-214ENST00000478696 ASCC3Q8N3C0 2202 aaKnown RBP0.93□□□□□ -2.26
GARNL3-214ENST00000478696 EP400Q96L91 3159 aa0.93□□□□□ -2.26
GARNL3-214ENST00000478696 CPSF1Q10570 1443 aaKnown RBP0.93□□□□□ -2.26
GARNL3-214ENST00000478696 TRBV7-1A0A0A6YYK4 115 aa0.93□□□□□ -2.26
GARNL3-214ENST00000478696 RBAKDNA6NC62 111 aa0.93□□□□□ -2.26
GARNL3-214ENST00000478696 MPC2O95563 127 aa0.93□□□□□ -2.26
GARNL3-214ENST00000478696 CCL3L1P16619 93 aa0.93□□□□□ -2.26
GARNL3-214ENST00000478696 ELOF1P60002 83 aaKnown RBP0.93□□□□□ -2.26
GARNL3-214ENST00000478696 KLKP1Q107X0 134 aa0.93□□□□□ -2.26
GARNL3-214ENST00000478696 COL5A1-AS1Q5SY13 56 aa0.93□□□□□ -2.26
GARNL3-214ENST00000478696 C10orf128Q5T292 105 aa0.93□□□□□ -2.26
GARNL3-214ENST00000478696 FAM74A4Q5TZK3 123 aa0.93□□□□□ -2.26
GARNL3-214ENST00000478696 MYOZ3Q8TDC0 251 aa0.93□□□□□ -2.26
GARNL3-214ENST00000478696 COX7B2Q8TF08 81 aa0.93□□□□□ -2.26
GARNL3-214ENST00000478696 URB2Q14146 1524 aaKnown RBP0.93□□□□□ -2.26
GARNL3-214ENST00000478696 CACNA1BQ00975 2339 aa0.93□□□□□ -2.26
GARNL3-214ENST00000478696 ALKQ9UM73 1620 aa0.93□□□□□ -2.26
GARNL3-214ENST00000478696 BCORL1Q5H9F3 1711 aa0.92□□□□□ -2.26
GARNL3-214ENST00000478696 TNRC6BQ9UPQ9 1833 aaKnown RBP0.92□□□□□ -2.26
GARNL3-214ENST00000478696 PKD1L2Q7Z442 2459 aa0.92□□□□□ -2.26
GARNL3-214ENST00000478696 CFAP43Q8NDM7 1665 aa0.92□□□□□ -2.26
GARNL3-214ENST00000478696 TRBV30A0A0K0K1B3 111 aa0.92□□□□□ -2.26
GARNL3-214ENST00000478696 FXYD1O00168 92 aa0.92□□□□□ -2.26
GARNL3-214ENST00000478696 LINC00032P0C843 101 aa0.92□□□□□ -2.26
GARNL3-214ENST00000478696 SNCAP37840 140 aa0.92□□□□□ -2.26
GARNL3-214ENST00000478696 EFNA4P52798 201 aa0.92□□□□□ -2.26
GARNL3-214ENST00000478696 KRTAP21-3Q3LHN1 58 aa0.92□□□□□ -2.26
GARNL3-214ENST00000478696 LINC00575Q6W349 94 aa0.92□□□□□ -2.26
GARNL3-214ENST00000478696 Q86TA4 180 aa0.92□□□□□ -2.26
GARNL3-214ENST00000478696 SNHG12Q9BXW3 62 aa0.92□□□□□ -2.26
GARNL3-214ENST00000478696 DPY30Q9C005 99 aa0.92□□□□□ -2.26
GARNL3-214ENST00000478696 AP4S1Q9Y587 144 aa0.92□□□□□ -2.26
GARNL3-214ENST00000478696 ZFYVE16Q7Z3T8 1539 aa0.92□□□□□ -2.26
GARNL3-214ENST00000478696 CDK12Q9NYV4 1490 aaPredicted RBP0.92□□□□□ -2.26
GARNL3-214ENST00000478696 NCOA6Q14686 2063 aaPredicted RBP0.92□□□□□ -2.26
GARNL3-214ENST00000478696 PTPRDP23468 1912 aa0.91□□□□□ -2.26
GARNL3-214ENST00000478696 PREX1Q8TCU6 1659 aa0.91□□□□□ -2.26
GARNL3-214ENST00000478696 BLMP54132 1417 aaPredicted RBP0.91□□□□□ -2.26
GARNL3-214ENST00000478696 C10orf71Q711Q0 1435 aa0.91□□□□□ -2.26
GARNL3-214ENST00000478696 TRANK1O15050 2925 aa0.91□□□□□ -2.26
GARNL3-214ENST00000478696 MCM3APO60318 1980 aa0.91□□□□□ -2.26
GARNL3-214ENST00000478696 CASP8AP2Q9UKL3 1982 aa0.91□□□□□ -2.26
GARNL3-214ENST00000478696 ADCY10Q96PN6 1610 aa0.91□□□□□ -2.26
GARNL3-214ENST00000478696 A0A1W2PPM0 123 aa0.91□□□□□ -2.26
GARNL3-214ENST00000478696 CLPSL1A2RUU4 121 aa0.91□□□□□ -2.26
GARNL3-214ENST00000478696 LYNX1P0DP58 116 aa0.91□□□□□ -2.26
GARNL3-214ENST00000478696 GNG2P59768 71 aa0.91□□□□□ -2.26
GARNL3-214ENST00000478696 C10orf99Q6UWK7 81 aa0.91□□□□□ -2.26
GARNL3-214ENST00000478696 LINC00474Q9P2X8 69 aa0.91□□□□□ -2.26
GARNL3-214ENST00000478696 SCP2D1Q9UJQ7 156 aa0.91□□□□□ -2.26
GARNL3-214ENST00000478696 V9GYV3 84 aa0.91□□□□□ -2.26
GARNL3-214ENST00000478696 SUPT6HQ7KZ85 1726 aaKnown RBP0.91□□□□□ -2.26
GARNL3-214ENST00000478696 GOLGB1Q14789 3259 aaKnown RBP0.91□□□□□ -2.26
GARNL3-214ENST00000478696 SPTBP11277 2137 aa0.91□□□□□ -2.26
GARNL3-214ENST00000478696 CTTNBP2Q8WZ74 1663 aa0.91□□□□□ -2.26
GARNL3-214ENST00000478696 QRICH2Q9H0J4 1663 aa0.91□□□□□ -2.26
GARNL3-214ENST00000478696 CASKIN1Q8WXD9 1431 aa0.9□□□□□ -2.26
GARNL3-214ENST00000478696 LRRC7Q96NW7 1537 aa0.9□□□□□ -2.26
GARNL3-214ENST00000478696 SETXQ7Z333 2677 aaKnown RBP0.9□□□□□ -2.27
GARNL3-214ENST00000478696 TRBV7-3A0A075B6L6 115 aa0.9□□□□□ -2.27
GARNL3-214ENST00000478696 ANGP03950 147 aaKnown RBP0.9□□□□□ -2.27
GARNL3-214ENST00000478696 EDDM3BP56851 147 aa0.9□□□□□ -2.27
GARNL3-214ENST00000478696 KRTDAPP60985 99 aa0.9□□□□□ -2.27
GARNL3-214ENST00000478696 GNG11P61952 73 aa0.9□□□□□ -2.27
GARNL3-214ENST00000478696 UBA52P62987 128 aaKnown RBP0.9□□□□□ -2.27
GARNL3-214ENST00000478696 TMEM14BQ9NUH8 114 aa0.9□□□□□ -2.27
GARNL3-214ENST00000478696 IQSEC2Q5JU85 1478 aa0.9□□□□□ -2.27
GARNL3-214ENST00000478696 FANCD2Q9BXW9 1451 aa0.9□□□□□ -2.27
GARNL3-214ENST00000478696 NRKQ7Z2Y5 1582 aa0.9□□□□□ -2.27
GARNL3-214ENST00000478696 RBBP6Q7Z6E9 1792 aaKnown RBP0.9□□□□□ -2.27
GARNL3-214ENST00000478696 PLXNA2O75051 1894 aa0.9□□□□□ -2.27
GARNL3-214ENST00000478696 FLG2Q5D862 2391 aaPredicted RBP0.9□□□□□ -2.27
GARNL3-214ENST00000478696 ZNF609O15014 1411 aa0.89□□□□□ -2.27
GARNL3-214ENST00000478696 PPIP5K1Q6PFW1 1433 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms