RNA–Protein interactions for RNA: ENST00000478696.5

GARNL3-214, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-214ENST00000478696 AEBP2Q6ZN18 517 aaPredicted RBP14.26□□□□□ -0.13
GARNL3-214ENST00000478696 CHIC1Q5VXU3 224 aa13.9□□□□□ -0.18
GARNL3-214ENST00000478696 SENP3Q9H4L4 574 aaPredicted RBP12.25□□□□□ -0.45
GARNL3-214ENST00000478696 PHF23Q9BUL5 403 aaPredicted RBP12.15□□□□□ -0.46
GARNL3-214ENST00000478696 PLPPR3Q6T4P5 718 aa11.31□□□□□ -0.6
GARNL3-214ENST00000478696 FOXD1Q16676 465 aa11.3□□□□□ -0.6
GARNL3-214ENST00000478696 ADRA2BP18089 450 aa10.78□□□□□ -0.68
GARNL3-214ENST00000478696 PPP6R1Q9UPN7 881 aa10.76□□□□□ -0.69
GARNL3-214ENST00000478696 PIAS4Q8N2W9 510 aaPredicted RBP10.7□□□□□ -0.7
GARNL3-214ENST00000478696 MSH5O43196 834 aa10.56□□□□□ -0.72
GARNL3-214ENST00000478696 SCAF1Q9H7N4 1312 aaKnown RBP10.02□□□□□ -0.81
GARNL3-214ENST00000478696 PPP4R3CPQ6ZMV5 832 aa9.91□□□□□ -0.82
GARNL3-214ENST00000478696 MAPK8IP2Q13387 824 aaPredicted RBP9.79□□□□□ -0.84
GARNL3-214ENST00000478696 DMRT2Q9Y5R5 561 aa9.72□□□□□ -0.85
GARNL3-214ENST00000478696 NCBP3Q53F19 620 aaKnown RBP9.71□□□□□ -0.86
GARNL3-214ENST00000478696 POTEDQ86YR6 584 aa9.71□□□□□ -0.86
GARNL3-214ENST00000478696 CNKSR2Q8WXI2 1034 aa9.69□□□□□ -0.86
GARNL3-214ENST00000478696 KCNA4P22459 653 aa9.53□□□□□ -0.88
GARNL3-214ENST00000478696 RNF216Q9NWF9 866 aaPredicted RBP9.51□□□□□ -0.89
GARNL3-214ENST00000478696 HOXD11P31277 338 aaPredicted RBP9.47□□□□□ -0.89
GARNL3-214ENST00000478696 NPM3O75607 178 aaKnown RBP9.46□□□□□ -0.9
GARNL3-214ENST00000478696 DCAF8L1A6NGE4 600 aa9.38□□□□□ -0.91
GARNL3-214ENST00000478696 DNAJC5BQ9UF47 199 aa9.19□□□□□ -0.94
GARNL3-214ENST00000478696 SLC4A1APQ9BWU0 796 aaKnown RBP9.11□□□□□ -0.95
GARNL3-214ENST00000478696 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.1□□□□□ -0.95
GARNL3-214ENST00000478696 RNF39Q9H2S5 420 aa8.97□□□□□ -0.97
GARNL3-214ENST00000478696 C1QBPQ07021 282 aaKnown RBP8.92□□□□□ -0.98
GARNL3-214ENST00000478696 SLC4A2P04920 1241 aa8.91□□□□□ -0.98
GARNL3-214ENST00000478696 CACNB1Q02641 598 aaPredicted RBP8.88□□□□□ -0.99
GARNL3-214ENST00000478696 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.85□□□□□ -0.99
GARNL3-214ENST00000478696 HNRNPUL2Q1KMD3 747 aaKnown RBP8.85□□□□□ -0.99
GARNL3-214ENST00000478696 FOXD4L1Q9NU39 408 aa8.85□□□□□ -0.99
GARNL3-214ENST00000478696 U3KPZ7 1027 aaPredicted RBP8.85□□□□□ -0.99
GARNL3-214ENST00000478696 MYCNP04198 464 aaPredicted RBP8.8□□□□□ -1
GARNL3-214ENST00000478696 APLP2Q06481 763 aa8.8□□□□□ -1
GARNL3-214ENST00000478696 SAMD1Q6SPF0 538 aaPredicted RBP8.77□□□□□ -1.01
GARNL3-214ENST00000478696 EHMT2Q96KQ7 1210 aa8.72□□□□□ -1.01
GARNL3-214ENST00000478696 ZBTB22O15209 634 aa8.7□□□□□ -1.02
GARNL3-214ENST00000478696 CAPN15O75808 1086 aa8.69□□□□□ -1.02
GARNL3-214ENST00000478696 SPINK5Q9NQ38 1064 aaPredicted RBP8.63□□□□□ -1.03
GARNL3-214ENST00000478696 ZNF219Q9P2Y4 722 aaPredicted RBP8.63□□□□□ -1.03
GARNL3-214ENST00000478696 CSRNP3Q8WYN3 585 aa8.62□□□□□ -1.03
GARNL3-214ENST00000478696 TRHP20396 242 aaPredicted RBP8.61□□□□□ -1.03
GARNL3-214ENST00000478696 ATXN8OSP0DMR3 200 aa8.57□□□□□ -1.04
GARNL3-214ENST00000478696 DSG3P32926 999 aa8.51□□□□□ -1.05
GARNL3-214ENST00000478696 ATF5Q9Y2D1 282 aaPredicted RBP8.47□□□□□ -1.05
GARNL3-214ENST00000478696 ABCB7O75027 752 aa8.46□□□□□ -1.06
GARNL3-214ENST00000478696 POLA2Q14181 598 aa8.43□□□□□ -1.06
GARNL3-214ENST00000478696 ZBTB12Q9Y330 459 aaPredicted RBP8.35□□□□□ -1.07
GARNL3-214ENST00000478696 FBLN2P98095 1184 aa8.27□□□□□ -1.09
GARNL3-214ENST00000478696 RBM42Q9BTD8 480 aaKnown RBP8.2□□□□□ -1.1
GARNL3-214ENST00000478696 OSCARQ8IYS5 282 aa8.12□□□□□ -1.11
GARNL3-214ENST00000478696 MKRN4PQ13434 485 aaPredicted RBP8.1□□□□□ -1.11
GARNL3-214ENST00000478696 SPDYE2BA6NHP3 402 aa8.07□□□□□ -1.12
GARNL3-214ENST00000478696 SPDYE6P0CI01 402 aa8.07□□□□□ -1.12
GARNL3-214ENST00000478696 SPDYE2Q495Y8 402 aa8.07□□□□□ -1.12
GARNL3-214ENST00000478696 AKT1S1Q96B36 256 aa8.04□□□□□ -1.12
GARNL3-214ENST00000478696 ZNF692Q9BU19 519 aaPredicted RBP8.04□□□□□ -1.12
GARNL3-214ENST00000478696 SPDYE4A6NLX3 237 aa7.96□□□□□ -1.14
GARNL3-214ENST00000478696 SSUH2Q9Y2M2 353 aa7.94□□□□□ -1.14
GARNL3-214ENST00000478696 REM2Q8IYK8 340 aaPredicted RBP7.93□□□□□ -1.14
GARNL3-214ENST00000478696 PABPN1Q86U42 306 aaKnown RBP eCLIP7.9□□□□□ -1.14
GARNL3-214ENST00000478696 SPDYE1Q8NFV5 336 aaPredicted RBP7.88□□□□□ -1.15
GARNL3-214ENST00000478696 FKBP8Q14318 412 aa7.86□□□□□ -1.15
GARNL3-214ENST00000478696 CLEC11AQ9Y240 323 aa7.86□□□□□ -1.15
GARNL3-214ENST00000478696 CHRDL2Q6WN34 429 aa7.84□□□□□ -1.15
GARNL3-214ENST00000478696 PITPNM1O00562 1244 aa7.82□□□□□ -1.16
GARNL3-214ENST00000478696 STAG3Q9UJ98 1225 aa7.82□□□□□ -1.16
GARNL3-214ENST00000478696 PRR29P0C7W0 189 aa7.77□□□□□ -1.17
GARNL3-214ENST00000478696 PROM2Q8N271 834 aa7.73□□□□□ -1.17
GARNL3-214ENST00000478696 POTEHQ6S545 545 aa7.71□□□□□ -1.18
GARNL3-214ENST00000478696 FXR2P51116 673 aaKnown RBP eCLIP7.69□□□□□ -1.18
GARNL3-214ENST00000478696 PIP4P2Q8N4L2 257 aa7.69□□□□□ -1.18
GARNL3-214ENST00000478696 FBXO3Q9UK99 471 aa7.69□□□□□ -1.18
GARNL3-214ENST00000478696 PLEKHG5O94827 1062 aa7.66□□□□□ -1.18
GARNL3-214ENST00000478696 PRKAR2AP13861 404 aaKnown RBP7.66□□□□□ -1.18
GARNL3-214ENST00000478696 CHADLQ6NUI6 762 aa7.6□□□□□ -1.19
GARNL3-214ENST00000478696 MIER1Q8N108 512 aa7.6□□□□□ -1.19
GARNL3-214ENST00000478696 PLCD3Q8N3E9 789 aa7.59□□□□□ -1.19
GARNL3-214ENST00000478696 CREBZFQ9NS37 354 aa7.56□□□□□ -1.2
GARNL3-214ENST00000478696 ZBTB47Q9UFB7 747 aaPredicted RBP7.56□□□□□ -1.2
GARNL3-214ENST00000478696 NPM1P06748 294 aaKnown RBP eCLIP7.55□□□□□ -1.2
GARNL3-214ENST00000478696 FARP1Q9Y4F1 1045 aaPredicted RBP7.55□□□□□ -1.2
GARNL3-214ENST00000478696 HAX1O00165 279 aa7.54□□□□□ -1.2
GARNL3-214ENST00000478696 VASPP50552 380 aaPredicted RBP7.5□□□□□ -1.21
GARNL3-214ENST00000478696 PAK3O75914 559 aaPredicted RBP7.48□□□□□ -1.21
GARNL3-214ENST00000478696 KLHL34Q8N239 644 aa7.48□□□□□ -1.21
GARNL3-214ENST00000478696 CD44P16070 742 aaKnown RBP7.44□□□□□ -1.22
GARNL3-214ENST00000478696 MNX1P50219 401 aaPredicted RBP7.44□□□□□ -1.22
GARNL3-214ENST00000478696 C19orf67A6NJJ6 358 aa7.43□□□□□ -1.22
GARNL3-214ENST00000478696 ZRANB1Q9UGI0 708 aa7.39□□□□□ -1.23
GARNL3-214ENST00000478696 CLCN6P51797 869 aa7.37□□□□□ -1.23
GARNL3-214ENST00000478696 SP7Q8TDD2 431 aaPredicted RBP7.37□□□□□ -1.23
GARNL3-214ENST00000478696 TSPYL2Q9H2G4 693 aaPredicted RBP7.37□□□□□ -1.23
GARNL3-214ENST00000478696 IFNLR1Q8IU57 520 aaPredicted RBP7.36□□□□□ -1.23
GARNL3-214ENST00000478696 FAM212AQ96EL1 285 aa7.36□□□□□ -1.23
GARNL3-214ENST00000478696 SPOCK2Q92563 424 aa7.35□□□□□ -1.23
GARNL3-214ENST00000478696 EVX2Q03828 476 aa7.34□□□□□ -1.23
GARNL3-214ENST00000478696 NUBP1P53384 320 aa7.33□□□□□ -1.24
GARNL3-214ENST00000478696 DCAF8Q5TAQ9 597 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms