RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 P01737 135 aa12.43□□□□□ -0.42
SREBF1-212ENST00000478616 CTRLP40313 264 aa12.43□□□□□ -0.42
SREBF1-212ENST00000478616 RPS20P60866 119 aaKnown RBP12.43□□□□□ -0.42
SREBF1-212ENST00000478616 CDPF1Q6NVV7 123 aa12.43□□□□□ -0.42
SREBF1-212ENST00000478616 LYZL1Q6UWQ5 148 aa12.43□□□□□ -0.42
SREBF1-212ENST00000478616 TRBV6-8A0A0A6YYG3 113 aa12.42□□□□□ -0.42
SREBF1-212ENST00000478616 GTSF1Q8WW33 167 aa12.42□□□□□ -0.42
SREBF1-212ENST00000478616 DAZAP1Q96EP5 407 aaKnown RBP12.42□□□□□ -0.42
SREBF1-212ENST00000478616 AP1S3Q96PC3 154 aa12.42□□□□□ -0.42
SREBF1-212ENST00000478616 TPPP3Q9BW30 176 aa12.42□□□□□ -0.42
SREBF1-212ENST00000478616 CNFNQ9BYD5 112 aa12.42□□□□□ -0.42
SREBF1-212ENST00000478616 VPS13BQ7Z7G8 4022 aa12.41□□□□□ -0.42
SREBF1-212ENST00000478616 TMEM250H0YL14 139 aa12.41□□□□□ -0.42
SREBF1-212ENST00000478616 SUMO4Q6EEV6 95 aa12.41□□□□□ -0.42
SREBF1-212ENST00000478616 Q8N814 137 aa12.41□□□□□ -0.42
SREBF1-212ENST00000478616 EIF5A2Q9GZV4 153 aaKnown RBP12.41□□□□□ -0.42
SREBF1-212ENST00000478616 EREGO14944 169 aa12.4□□□□□ -0.42
SREBF1-212ENST00000478616 RAB14P61106 215 aa12.4□□□□□ -0.42
SREBF1-212ENST00000478616 Q8N1X5 172 aa12.4□□□□□ -0.42
SREBF1-212ENST00000478616 KLK12Q9UKR0 248 aa12.4□□□□□ -0.42
SREBF1-212ENST00000478616 F5H697 171 aa12.39□□□□□ -0.43
SREBF1-212ENST00000478616 NTF3P20783 257 aa12.39□□□□□ -0.43
SREBF1-212ENST00000478616 CACNG7P62955 275 aa12.39□□□□□ -0.43
SREBF1-212ENST00000478616 RPP21Q9H633 154 aaKnown RBP12.39□□□□□ -0.43
SREBF1-212ENST00000478616 F2Z2F3 143 aa12.38□□□□□ -0.43
SREBF1-212ENST00000478616 NDUFS6O75380 124 aaKnown RBP12.38□□□□□ -0.43
SREBF1-212ENST00000478616 MPV17L2Q567V2 206 aa12.38□□□□□ -0.43
SREBF1-212ENST00000478616 CLLU1Q5K131 121 aa12.38□□□□□ -0.43
SREBF1-212ENST00000478616 ATRAIDQ6UW56 229 aa12.38□□□□□ -0.43
SREBF1-212ENST00000478616 PSCAO43653 123 aa12.37□□□□□ -0.43
SREBF1-212ENST00000478616 SRP19P09132 144 aaKnown RBP12.37□□□□□ -0.43
SREBF1-212ENST00000478616 WDR73Q6P4I2 378 aa12.37□□□□□ -0.43
SREBF1-212ENST00000478616 ENHOQ6UWT2 76 aa12.37□□□□□ -0.43
SREBF1-212ENST00000478616 BIN3Q9NQY0 253 aa12.37□□□□□ -0.43
SREBF1-212ENST00000478616 TRAV8-3A0A0A6YYJ7 113 aa12.36□□□□□ -0.43
SREBF1-212ENST00000478616 C9JQL5 133 aa12.36□□□□□ -0.43
SREBF1-212ENST00000478616 LECT2O14960 151 aa12.36□□□□□ -0.43
SREBF1-212ENST00000478616 MGPP08493 103 aa12.36□□□□□ -0.43
SREBF1-212ENST00000478616 FOXA3P55318 350 aaPredicted RBP12.36□□□□□ -0.43
SREBF1-212ENST00000478616 SRSF3P84103 164 aaKnown RBP12.36□□□□□ -0.43
SREBF1-212ENST00000478616 FAM231DQ6ZW35 169 aa12.36□□□□□ -0.43
SREBF1-212ENST00000478616 CHCHD7Q9BUK0 85 aa12.36□□□□□ -0.43
SREBF1-212ENST00000478616 SMIM17P0DL12 118 aa12.35□□□□□ -0.43
SREBF1-212ENST00000478616 GCSHP23434 173 aa12.35□□□□□ -0.43
SREBF1-212ENST00000478616 Q8N976 141 aa12.35□□□□□ -0.43
SREBF1-212ENST00000478616 BAALCQ8WXS3 180 aa12.35□□□□□ -0.43
SREBF1-212ENST00000478616 FAM30AQ9NZY2 134 aa12.35□□□□□ -0.43
SREBF1-212ENST00000478616 XKRY2A2RUG3 117 aa12.34□□□□□ -0.43
SREBF1-212ENST00000478616 CEBPGP53567 150 aa12.34□□□□□ -0.43
SREBF1-212ENST00000478616 HAMPP81172 84 aa12.34□□□□□ -0.43
SREBF1-212ENST00000478616 PEA15Q15121 130 aa12.34□□□□□ -0.43
SREBF1-212ENST00000478616 NTN5Q8WTR8 489 aaPredicted RBP12.34□□□□□ -0.43
SREBF1-212ENST00000478616 UBE2WQ96B02 151 aa12.34□□□□□ -0.43
SREBF1-212ENST00000478616 TM2D2Q9BX73 214 aa12.34□□□□□ -0.43
SREBF1-212ENST00000478616 IGLV5-52A0A0A0MRZ9 124 aa12.33□□□□□ -0.44
SREBF1-212ENST00000478616 KRTAP26-1Q6PEX3 210 aa12.33□□□□□ -0.44
SREBF1-212ENST00000478616 LINC01551Q86U37 167 aa12.33□□□□□ -0.44
SREBF1-212ENST00000478616 DPH3P1Q9H4G8 78 aa12.33□□□□□ -0.44
SREBF1-212ENST00000478616 A0A087WX48 190 aa12.32□□□□□ -0.44
SREBF1-212ENST00000478616 IQCJQ1A5X6 159 aa12.32□□□□□ -0.44
SREBF1-212ENST00000478616 RASL11AQ6T310 242 aa12.32□□□□□ -0.44
SREBF1-212ENST00000478616 GATD1Q8NB37 220 aa12.32□□□□□ -0.44
SREBF1-212ENST00000478616 DEFB104AQ8WTQ1 72 aa12.32□□□□□ -0.44
SREBF1-212ENST00000478616 SMDT1Q9H4I9 107 aa12.32□□□□□ -0.44
SREBF1-212ENST00000478616 TRAV26-2A0A0B4J265 109 aa12.31□□□□□ -0.44
SREBF1-212ENST00000478616 GATCO43716 136 aaKnown RBP12.31□□□□□ -0.44
SREBF1-212ENST00000478616 TRGC1P0CF51 173 aa12.31□□□□□ -0.44
SREBF1-212ENST00000478616 RBX1P62877 108 aa12.31□□□□□ -0.44
SREBF1-212ENST00000478616 URGCP-MRPS24S4R325 110 aa12.31□□□□□ -0.44
SREBF1-212ENST00000478616 IGKV2D-24A0A075B6R9 120 aa12.3□□□□□ -0.44
SREBF1-212ENST00000478616 TMEM262E9PQX1 116 aa12.3□□□□□ -0.44
SREBF1-212ENST00000478616 GAS8-AS1O95177 125 aa12.3□□□□□ -0.44
SREBF1-212ENST00000478616 GAGE6Q13070 117 aa12.3□□□□□ -0.44
SREBF1-212ENST00000478616 TWIST1Q15672 202 aa12.3□□□□□ -0.44
SREBF1-212ENST00000478616 C15orf54Q8N8G6 183 aa12.3□□□□□ -0.44
SREBF1-212ENST00000478616 SMIM7Q9BQ49 75 aa12.3□□□□□ -0.44
SREBF1-212ENST00000478616 CHCHD5Q9BSY4 110 aa12.3□□□□□ -0.44
SREBF1-212ENST00000478616 GFRA4Q9GZZ7 299 aa12.3□□□□□ -0.44
SREBF1-212ENST00000478616 NIT2Q9NQR4 276 aa12.3□□□□□ -0.44
SREBF1-212ENST00000478616 PRR34Q9NV39 138 aa12.3□□□□□ -0.44
SREBF1-212ENST00000478616 CT83Q5H943 113 aa12.29□□□□□ -0.44
SREBF1-212ENST00000478616 ZNF727A8MUV8 499 aa12.28□□□□□ -0.44
SREBF1-212ENST00000478616 H7C1H1 209 aa12.28□□□□□ -0.44
SREBF1-212ENST00000478616 LINC01620Q4KN68 170 aa12.28□□□□□ -0.44
SREBF1-212ENST00000478616 C20orf203Q8NBC4 194 aa12.28□□□□□ -0.44
SREBF1-212ENST00000478616 RPL39LQ96EH5 51 aaKnown RBP12.28□□□□□ -0.44
SREBF1-212ENST00000478616 PGLYRP4Q96LB8 373 aa12.28□□□□□ -0.44
SREBF1-212ENST00000478616 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.27□□□□□ -0.45
SREBF1-212ENST00000478616 ELOBQ15370 118 aa12.27□□□□□ -0.45
SREBF1-212ENST00000478616 TMEM97Q5BJF2 176 aa12.27□□□□□ -0.45
SREBF1-212ENST00000478616 Q6ZSA8 131 aa12.27□□□□□ -0.45
SREBF1-212ENST00000478616 V9GYV3 84 aa12.27□□□□□ -0.45
SREBF1-212ENST00000478616 IGLV4-60A0A075B6I1 120 aa12.26□□□□□ -0.45
SREBF1-212ENST00000478616 TRBV25-1A0A075B6N4 114 aa12.26□□□□□ -0.45
SREBF1-212ENST00000478616 ANGP03950 147 aaKnown RBP12.26□□□□□ -0.45
SREBF1-212ENST00000478616 FAM74A3Q4VXF1 159 aa12.26□□□□□ -0.45
SREBF1-212ENST00000478616 OSTCQ9NRP0 149 aa12.26□□□□□ -0.45
SREBF1-212ENST00000478616 COX11Q9Y6N1 276 aa12.26□□□□□ -0.45
SREBF1-212ENST00000478616 IGHV1-24A0A0C4DH33 117 aa12.25□□□□□ -0.45
SREBF1-212ENST00000478616 A8MWL6 223 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms