RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 RETNLBQ9BQ08 111 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 Q9BRP9 147 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 SLC50A1Q9BRV3 221 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 CYSTM1Q9H1C7 97 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 TMEM242Q9NWH2 141 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 NDUFB11Q9NX14 153 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 TAS2R4Q9NYW5 299 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 LINC00474Q9P2X8 69 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 CACFD1Q9UGQ2 172 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 AHNAK2Q8IVF2 5795 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 MROH2AA6NES4 1674 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 CFAP43Q8NDM7 1665 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 EFCAB5A4FU69 1503 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 ABCC2Q92887 1545 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 PLIN4Q96Q06 1357 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 PIK3C2BO00750 1634 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 LAMC1P11047 1609 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 MYO3AQ8NEV4 1616 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 RNF17Q9BXT8 1623 aaKnown RBP0.93□□□□□ -2.26
VPS50-213ENST00000477572 NCOA2Q15596 1464 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 NRXN1Q9ULB1 1477 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 MGAMO43451 1857 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 CUL9Q8IWT3 2517 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 ESPL1Q14674 2120 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 NUP188Q5SRE5 1749 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 GLI2P10070 1586 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 MYO7AQ13402 2215 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 LAMA4Q16363 1823 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 CLTCQ00610 1675 aaKnown RBP0.92□□□□□ -2.26
VPS50-213ENST00000477572 PREX1Q8TCU6 1659 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 IGKV2D-26A0A0A0MRZ7 120 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 TRAV3A0A0B4J244 114 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 UBE2L5PA0A1B0GUS4 154 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 C7orf77A4D0Y5 90 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 SYS1-DBNDD2H3BUS1 97 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 C19orf84I3L1E1 186 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 IGLV1-51P01701 117 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 PIRTP0C851 137 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 SAA1P0DJI8 122 aaPredicted RBP0.92□□□□□ -2.26
VPS50-213ENST00000477572 PRB4P10163 310 aaPredicted RBP0.92□□□□□ -2.26
VPS50-213ENST00000477572 CKS2P33552 79 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 ATP5EP56381 51 aaPredicted RBP0.92□□□□□ -2.26
VPS50-213ENST00000477572 UBE2L3P68036 154 aaKnown RBP0.92□□□□□ -2.26
VPS50-213ENST00000477572 MRPS36P82909 103 aaKnown RBP0.92□□□□□ -2.26
VPS50-213ENST00000477572 HMGN3Q15651 99 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 NMSQ5H8A3 153 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.92□□□□□ -2.26
VPS50-213ENST00000477572 ATP11AUNQ6ZP68 121 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 C5orf38Q86SI9 138 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 Q8IYB0 196 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 FAM19A2Q8N3H0 131 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 C15orf53Q8NAA6 179 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 OR8B3Q8NGG8 313 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 MYOZ3Q8TDC0 251 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 MUCL1Q96DR8 90 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 SCGB3A1Q96QR1 104 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 IMMP2LQ96T52 175 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 TIMM21Q9BVV7 248 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 LY96Q9Y6Y9 160 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 URB2Q14146 1524 aaKnown RBP0.92□□□□□ -2.26
VPS50-213ENST00000477572 DUOX2Q9NRD8 1548 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 NESP48681 1621 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 TNS1Q9HBL0 1735 aaKnown RBP0.92□□□□□ -2.26
VPS50-213ENST00000477572 IFT172Q9UG01 1749 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 AFDNP55196 1824 aaKnown RBP0.92□□□□□ -2.26
VPS50-213ENST00000477572 KIAA1549LQ6ZVL6 1849 aa0.92□□□□□ -2.26
VPS50-213ENST00000477572 BLMP54132 1417 aaPredicted RBP0.91□□□□□ -2.26
VPS50-213ENST00000477572 EDC4Q6P2E9 1401 aaKnown RBP0.91□□□□□ -2.26
VPS50-213ENST00000477572 CLASP1Q7Z460 1538 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.91□□□□□ -2.26
VPS50-213ENST00000477572 BRWD1Q9NSI6 2320 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 LRP5O75197 1615 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 TRAV14DV4A0A0A6YYC5 116 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 TRAV2A0A0B4J234 112 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 IGHV1-24A0A0C4DH33 117 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 LOC107984156A0A0G2JMH3 177 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 NAP1L6A6NFF2 107 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 IBA57-AS1B1ANH7 110 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 H3BPC8 53 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 J3QLW9 94 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 ATOX1O00244 68 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 GNRH2O43555 120 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 NPYP01303 97 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 IGHV1-69P01742 117 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 CCKP06307 115 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 SFTA3P0C7M3 94 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 RPL28P46779 137 aaKnown RBP0.91□□□□□ -2.26
VPS50-213ENST00000477572 FXYD7P58549 80 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 CCL8P80075 99 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 ZNF345Q14585 488 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 ELOBQ15370 118 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 RHOHQ15669 191 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 C12orf73Q69YU5 71 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 LYZL1Q6UWQ5 148 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 Q6ZRN7 208 aaPredicted RBP0.91□□□□□ -2.26
VPS50-213ENST00000477572 ARL17AQ8IVW1 177 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 DEFB119Q8N690 84 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 Q8N814 137 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 C18orf32Q8TCD1 76 aa0.91□□□□□ -2.26
VPS50-213ENST00000477572 SMCR5Q8TEV8 140 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms