RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 RPP21Q9H633 154 aaKnown RBP9.42□□□□□ -0.9
ATG9A-220ENST00000475339 ZNF727A8MUV8 499 aa9.41□□□□□ -0.9
ATG9A-220ENST00000475339 K7EN84 100 aa9.41□□□□□ -0.9
ATG9A-220ENST00000475339 SRP19P09132 144 aaKnown RBP9.41□□□□□ -0.9
ATG9A-220ENST00000475339 CACNG7P62955 275 aa9.41□□□□□ -0.9
ATG9A-220ENST00000475339 PEA15Q15121 130 aa9.41□□□□□ -0.9
ATG9A-220ENST00000475339 NUDT10Q8NFP7 164 aa9.41□□□□□ -0.9
ATG9A-220ENST00000475339 NUDT11Q96G61 164 aa9.41□□□□□ -0.9
ATG9A-220ENST00000475339 F2Z2F3 143 aa9.4□□□□□ -0.9
ATG9A-220ENST00000475339 CRYGDP07320 174 aa9.4□□□□□ -0.9
ATG9A-220ENST00000475339 IGLC6P0CF74 106 aa9.4□□□□□ -0.9
ATG9A-220ENST00000475339 RAB14P61106 215 aa9.4□□□□□ -0.9
ATG9A-220ENST00000475339 C14orf178Q8N769 122 aaPredicted RBP9.4□□□□□ -0.9
ATG9A-220ENST00000475339 ATP6V0E2Q8NHE4 81 aa9.4□□□□□ -0.9
ATG9A-220ENST00000475339 NTN5Q8WTR8 489 aaPredicted RBP9.4□□□□□ -0.9
ATG9A-220ENST00000475339 LY96Q9Y6Y9 160 aa9.4□□□□□ -0.9
ATG9A-220ENST00000475339 F5H697 171 aa9.39□□□□□ -0.91
ATG9A-220ENST00000475339 GATCO43716 136 aaKnown RBP9.39□□□□□ -0.91
ATG9A-220ENST00000475339 TIRAPP58753 221 aa9.39□□□□□ -0.91
ATG9A-220ENST00000475339 OR10J3Q5JRS4 329 aa9.39□□□□□ -0.91
ATG9A-220ENST00000475339 TRAV8-6A0A0B4J262 113 aa9.38□□□□□ -0.91
ATG9A-220ENST00000475339 RAB4BP61018 213 aa9.38□□□□□ -0.91
ATG9A-220ENST00000475339 FAM74A3Q4VXF1 159 aa9.38□□□□□ -0.91
ATG9A-220ENST00000475339 LYZL1Q6UWQ5 148 aa9.38□□□□□ -0.91
ATG9A-220ENST00000475339 FAM231DQ6ZW35 169 aa9.38□□□□□ -0.91
ATG9A-220ENST00000475339 LINC01551Q86U37 167 aa9.38□□□□□ -0.91
ATG9A-220ENST00000475339 WFDC10BQ8IUB3 73 aa9.38□□□□□ -0.91
ATG9A-220ENST00000475339 GTSF1LQ9H1H1 148 aa9.38□□□□□ -0.91
ATG9A-220ENST00000475339 TNXBP22105 4242 aa9.38□□□□□ -0.91
ATG9A-220ENST00000475339 TRAV9-2A0A087WT02 112 aa9.37□□□□□ -0.91
ATG9A-220ENST00000475339 TRBV10-1A0A0K0K1A3 114 aa9.37□□□□□ -0.91
ATG9A-220ENST00000475339 MGPP08493 103 aa9.37□□□□□ -0.91
ATG9A-220ENST00000475339 TRGC1P0CF51 173 aa9.37□□□□□ -0.91
ATG9A-220ENST00000475339 EVI2AP22794 236 aa9.37□□□□□ -0.91
ATG9A-220ENST00000475339 CTRLP40313 264 aa9.37□□□□□ -0.91
ATG9A-220ENST00000475339 RPL36AP83881 106 aaKnown RBP9.37□□□□□ -0.91
ATG9A-220ENST00000475339 Q6ZSA8 131 aa9.37□□□□□ -0.91
ATG9A-220ENST00000475339 RPL36ALQ969Q0 106 aaKnown RBP9.37□□□□□ -0.91
ATG9A-220ENST00000475339 SMDT1Q9H4I9 107 aa9.37□□□□□ -0.91
ATG9A-220ENST00000475339 MSRB1Q9NZV6 116 aa9.37□□□□□ -0.91
ATG9A-220ENST00000475339 A8MWL6 223 aa9.36□□□□□ -0.91
ATG9A-220ENST00000475339 MT1HL1P0DM35 61 aa9.36□□□□□ -0.91
ATG9A-220ENST00000475339 LINC00694P0DN24 101 aa9.36□□□□□ -0.91
ATG9A-220ENST00000475339 LELP1Q5T871 98 aa9.36□□□□□ -0.91
ATG9A-220ENST00000475339 C15orf54Q8N8G6 183 aa9.36□□□□□ -0.91
ATG9A-220ENST00000475339 LRCOL1A6NCL2 159 aa9.35□□□□□ -0.91
ATG9A-220ENST00000475339 TWIST1Q15672 202 aa9.35□□□□□ -0.91
ATG9A-220ENST00000475339 ADIRFQ15847 76 aa9.35□□□□□ -0.91
ATG9A-220ENST00000475339 TMEM241Q24JQ0 296 aa9.35□□□□□ -0.91
ATG9A-220ENST00000475339 CT83Q5H943 113 aa9.35□□□□□ -0.91
ATG9A-220ENST00000475339 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.35□□□□□ -0.91
ATG9A-220ENST00000475339 BORCS7Q96B45 105 aa9.35□□□□□ -0.91
ATG9A-220ENST00000475339 TRBV7-3A0A075B6L6 115 aa9.34□□□□□ -0.91
ATG9A-220ENST00000475339 A0A087WWC5 75 aa9.34□□□□□ -0.91
ATG9A-220ENST00000475339 IGHV3-38A0A0C4DH36 116 aa9.34□□□□□ -0.91
ATG9A-220ENST00000475339 C9JQL5 133 aa9.34□□□□□ -0.91
ATG9A-220ENST00000475339 NTF3P20783 257 aa9.34□□□□□ -0.91
ATG9A-220ENST00000475339 SRSF3P84103 164 aaKnown RBP9.34□□□□□ -0.91
ATG9A-220ENST00000475339 WDR73Q6P4I2 378 aa9.34□□□□□ -0.91
ATG9A-220ENST00000475339 SMIM15Q7Z3B0 74 aa9.34□□□□□ -0.91
ATG9A-220ENST00000475339 C10orf126Q8N4M7 172 aa9.34□□□□□ -0.91
ATG9A-220ENST00000475339 Q9UF83 564 aa9.34□□□□□ -0.91
ATG9A-220ENST00000475339 NAT8Q9UHE5 227 aa9.34□□□□□ -0.91
ATG9A-220ENST00000475339 H7C1H1 209 aa9.33□□□□□ -0.92
ATG9A-220ENST00000475339 K7EP13 123 aa9.33□□□□□ -0.92
ATG9A-220ENST00000475339 SCXQ7RTU7 201 aa9.33□□□□□ -0.92
ATG9A-220ENST00000475339 Q8N814 137 aa9.33□□□□□ -0.92
ATG9A-220ENST00000475339 GTSF1Q8WW33 167 aa9.33□□□□□ -0.92
ATG9A-220ENST00000475339 PGLYRP4Q96LB8 373 aa9.33□□□□□ -0.92
ATG9A-220ENST00000475339 DPH3P1Q9H4G8 78 aa9.33□□□□□ -0.92
ATG9A-220ENST00000475339 OSTCQ9NRP0 149 aa9.33□□□□□ -0.92
ATG9A-220ENST00000475339 RPL23P62829 140 aaKnown RBP9.32□□□□□ -0.92
ATG9A-220ENST00000475339 NEXN-AS1Q8NBZ9 246 aa9.32□□□□□ -0.92
ATG9A-220ENST00000475339 OR10G8Q8NGN5 311 aa9.32□□□□□ -0.92
ATG9A-220ENST00000475339 TSKUQ8WUA8 353 aa9.32□□□□□ -0.92
ATG9A-220ENST00000475339 ISOC2Q96AB3 205 aa9.32□□□□□ -0.92
ATG9A-220ENST00000475339 CNFNQ9BYD5 112 aa9.32□□□□□ -0.92
ATG9A-220ENST00000475339 KIF25-AS1Q9Y6Z4 181 aa9.32□□□□□ -0.92
ATG9A-220ENST00000475339 GAS8-AS1O95177 125 aa9.31□□□□□ -0.92
ATG9A-220ENST00000475339 UBE2D3P61077 147 aa9.31□□□□□ -0.92
ATG9A-220ENST00000475339 UBE2D2P62837 147 aa9.31□□□□□ -0.92
ATG9A-220ENST00000475339 LINC01556Q5JQF7 62 aa9.31□□□□□ -0.92
ATG9A-220ENST00000475339 SUMO4Q6EEV6 95 aa9.31□□□□□ -0.92
ATG9A-220ENST00000475339 HIGD1CA8MV81 97 aa9.3□□□□□ -0.92
ATG9A-220ENST00000475339 PSCAO43653 123 aa9.3□□□□□ -0.92
ATG9A-220ENST00000475339 IGHV3-30P01768 117 aa9.3□□□□□ -0.92
ATG9A-220ENST00000475339 IGHV3-33P01772 117 aa9.3□□□□□ -0.92
ATG9A-220ENST00000475339 IGHV3-30-3P0DP02 117 aa9.3□□□□□ -0.92
ATG9A-220ENST00000475339 IGHV3-30-5P0DP03 117 aa9.3□□□□□ -0.92
ATG9A-220ENST00000475339 KCNIP4Q6PIL6 250 aa9.3□□□□□ -0.92
ATG9A-220ENST00000475339 GFRA4Q9GZZ7 299 aa9.3□□□□□ -0.92
ATG9A-220ENST00000475339 URGCP-MRPS24S4R325 110 aa9.3□□□□□ -0.92
ATG9A-220ENST00000475339 HNRNPA3P51991 378 aaKnown RBP9.29□□□□□ -0.92
ATG9A-220ENST00000475339 CLLU1Q5K131 121 aa9.29□□□□□ -0.92
ATG9A-220ENST00000475339 A0A1B0GUT8 65 aa9.28□□□□□ -0.92
ATG9A-220ENST00000475339 FAM231BA6NCW3 169 aa9.28□□□□□ -0.92
ATG9A-220ENST00000475339 M0QY20 66 aa9.28□□□□□ -0.92
ATG9A-220ENST00000475339 RASL11AQ6T310 242 aa9.28□□□□□ -0.92
ATG9A-220ENST00000475339 DAZ4Q86SG3 579 aaKnown RBP9.28□□□□□ -0.92
ATG9A-220ENST00000475339 DNAJC30Q96LL9 226 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms