RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 GUCA1AP43080 201 aaPredicted RBP0.05□□□□□ -2.4
COPS3-206ENST00000471414 EDDM3BP56851 147 aa0.05□□□□□ -2.4
COPS3-206ENST00000471414 COPZ1P61923 177 aa0.05□□□□□ -2.4
COPS3-206ENST00000471414 SMCO1Q147U7 214 aa0.05□□□□□ -2.4
COPS3-206ENST00000471414 SPTSSAQ969W0 71 aa0.05□□□□□ -2.4
COPS3-206ENST00000471414 TCEAL4Q96EI5 215 aa0.05□□□□□ -2.4
COPS3-206ENST00000471414 ABCA12Q86UK0 2595 aa0.05□□□□□ -2.4
COPS3-206ENST00000471414 MYOM3Q5VTT5 1437 aa0.04□□□□□ -2.4
COPS3-206ENST00000471414 NWD2Q9ULI1 1742 aa0.04□□□□□ -2.4
COPS3-206ENST00000471414 PTPRZ1P23471 2315 aaPredicted RBP0.04□□□□□ -2.4
COPS3-206ENST00000471414 GOLGA3Q08378 1498 aa0.04□□□□□ -2.4
COPS3-206ENST00000471414 CADP27708 2225 aa0.04□□□□□ -2.4
COPS3-206ENST00000471414 NDUFB6O95139 128 aa0.04□□□□□ -2.4
COPS3-206ENST00000471414 CBLN1P23435 193 aa0.04□□□□□ -2.4
COPS3-206ENST00000471414 GCHFRP30047 84 aa0.04□□□□□ -2.4
COPS3-206ENST00000471414 ZNF818PQ6ZRF7 136 aa0.04□□□□□ -2.4
COPS3-206ENST00000471414 KCNRGQ8N5I3 272 aa0.04□□□□□ -2.4
COPS3-206ENST00000471414 FAM213BQ8TBF2 198 aa0.04□□□□□ -2.4
COPS3-206ENST00000471414 SDF2Q99470 211 aa0.04□□□□□ -2.4
COPS3-206ENST00000471414 WFDC6Q9BQY6 131 aa0.04□□□□□ -2.4
COPS3-206ENST00000471414 LRRC37A3O60309 1634 aa0.04□□□□□ -2.4
COPS3-206ENST00000471414 IFT172Q9UG01 1749 aa0.04□□□□□ -2.4
COPS3-206ENST00000471414 APOC4-APOC2K7ER74 178 aa0.03□□□□□ -2.4
COPS3-206ENST00000471414 SNCGO76070 127 aa0.03□□□□□ -2.4
COPS3-206ENST00000471414 SPTSSBQ8NFR3 76 aa0.03□□□□□ -2.4
COPS3-206ENST00000471414 PFDN5Q99471 154 aa0.03□□□□□ -2.4
COPS3-206ENST00000471414 TMEM191AQ9H0A3 160 aa0.03□□□□□ -2.4
COPS3-206ENST00000471414 MYH8P13535 1937 aa0.03□□□□□ -2.41
COPS3-206ENST00000471414 IGF2RP11717 2491 aa0.02□□□□□ -2.41
COPS3-206ENST00000471414 TRBV10-3A0A0K0K1G6 114 aa0.02□□□□□ -2.41
COPS3-206ENST00000471414 S100A7L2Q5SY68 101 aa0.02□□□□□ -2.41
COPS3-206ENST00000471414 CCDC167Q9P0B6 97 aa0.02□□□□□ -2.41
COPS3-206ENST00000471414 PAIP2BQ9ULR5 123 aaKnown RBP0.02□□□□□ -2.41
COPS3-206ENST00000471414 POLQO75417 2590 aa0.02□□□□□ -2.41
COPS3-206ENST00000471414 CELSR2Q9HCU4 2923 aa0.02□□□□□ -2.41
COPS3-206ENST00000471414 GRIN2AQ12879 1464 aa0.02□□□□□ -2.41
COPS3-206ENST00000471414 ZFYVE26Q68DK2 2539 aa0.02□□□□□ -2.41
COPS3-206ENST00000471414 HRNRQ86YZ3 2850 aaPredicted RBP0.01□□□□□ -2.41
COPS3-206ENST00000471414 TRAV1-2A0A0B4J238 106 aa0.01□□□□□ -2.41
COPS3-206ENST00000471414 G3V318 75 aa0.01□□□□□ -2.41
COPS3-206ENST00000471414 CCL8P80075 99 aa0.01□□□□□ -2.41
COPS3-206ENST00000471414 UBE2DNLQ8IWF7 75 aa0.01□□□□□ -2.41
COPS3-206ENST00000471414 LINC00312Q9Y6C7 94 aa0.01□□□□□ -2.41
COPS3-206ENST00000471414 U3KQA8 63 aa0.01□□□□□ -2.41
COPS3-206ENST00000471414 OTOGQ6ZRI0 2925 aa0.01□□□□□ -2.41
COPS3-206ENST00000471414 ZNF518AQ6AHZ1 1483 aa0.01□□□□□ -2.41
COPS3-206ENST00000471414 ZMYM4Q5VZL5 1548 aa0.01□□□□□ -2.41
COPS3-206ENST00000471414 BICRAQ9NZM4 1560 aa0.01□□□□□ -2.41
COPS3-206ENST00000471414 MYH9P35579 1960 aaKnown RBP0.01□□□□□ -2.41
COPS3-206ENST00000471414 PIEZO1Q92508 2521 aa0.01□□□□□ -2.41
COPS3-206ENST00000471414 NCOR2Q9Y618 2525 aa0.01□□□□□ -2.41
COPS3-206ENST00000471414 SMIM6P0DI80 62 aa0□□□□□ -2.41
COPS3-206ENST00000471414 PRDM2Q13029 1718 aa0□□□□□ -2.41
COPS3-206ENST00000471414 Q5VV11 94 aa0□□□□□ -2.41
COPS3-206ENST00000471414 CASKIN1Q8WXD9 1431 aa0□□□□□ -2.41
COPS3-206ENST00000471414 DPH3Q96FX2 82 aa0□□□□□ -2.41
COPS3-206ENST00000471414 IFT140Q96RY7 1462 aa0□□□□□ -2.41
COPS3-206ENST00000471414 SEC11CQ9BY50 192 aa0□□□□□ -2.41
COPS3-206ENST00000471414 SPRR2GQ9BYE4 73 aa0□□□□□ -2.41
COPS3-206ENST00000471414 ANK2Q01484 3957 aa-0□□□□□ -2.41
COPS3-206ENST00000471414 PXDNQ92626 1479 aa-0.01□□□□□ -2.41
COPS3-206ENST00000471414 FAM92AA1XBS5 289 aa-0.01□□□□□ -2.41
COPS3-206ENST00000471414 ZNF815PA8K554 130 aa-0.01□□□□□ -2.41
COPS3-206ENST00000471414 PIN1P1O15428 100 aa-0.01□□□□□ -2.41
COPS3-206ENST00000471414 ARPC4P59998 168 aa-0.01□□□□□ -2.41
COPS3-206ENST00000471414 SSBP3-AS1Q7Z2R9 100 aa-0.01□□□□□ -2.41
COPS3-206ENST00000471414 BAGE3Q86Y29 109 aa-0.01□□□□□ -2.41
COPS3-206ENST00000471414 PATJQ8NI35 1801 aa-0.01□□□□□ -2.41
COPS3-206ENST00000471414 CACNA1CQ13936 2221 aa-0.02□□□□□ -2.41
COPS3-206ENST00000471414 SIX6O95475 246 aa-0.02□□□□□ -2.41
COPS3-206ENST00000471414 PDCD10Q9BUL8 212 aa-0.02□□□□□ -2.41
COPS3-206ENST00000471414 WNK3Q9BYP7 1800 aa-0.02□□□□□ -2.41
COPS3-206ENST00000471414 F8P00451 2351 aa-0.02□□□□□ -2.41
COPS3-206ENST00000471414 PHLPP1O60346 1717 aa-0.02□□□□□ -2.41
COPS3-206ENST00000471414 ASXL3Q9C0F0 2248 aa-0.02□□□□□ -2.41
COPS3-206ENST00000471414 BIVM-ERCC5R4GMW8 1640 aa-0.02□□□□□ -2.41
COPS3-206ENST00000471414 MYH7P12883 1935 aa-0.03□□□□□ -2.41
COPS3-206ENST00000471414 DOCK1Q14185 1865 aa-0.03□□□□□ -2.41
COPS3-206ENST00000471414 PLXNB2O15031 1838 aa-0.03□□□□□ -2.41
COPS3-206ENST00000471414 FOCADQ5VW36 1801 aa-0.03□□□□□ -2.41
COPS3-206ENST00000471414 DOCK2Q92608 1830 aa-0.03□□□□□ -2.41
COPS3-206ENST00000471414 SPINK8P0C7L1 97 aa-0.03□□□□□ -2.41
COPS3-206ENST00000471414 HIST1H1DP16402 221 aaKnown RBP-0.03□□□□□ -2.41
COPS3-206ENST00000471414 CFAP126Q5VTH2 177 aa-0.03□□□□□ -2.41
COPS3-206ENST00000471414 COPS9Q8WXC6 57 aa-0.03□□□□□ -2.41
COPS3-206ENST00000471414 CYP4F30PQ9H0H9 118 aa-0.03□□□□□ -2.41
COPS3-206ENST00000471414 DSTQ03001 7570 aaKnown RBP-0.03□□□□□ -2.41
COPS3-206ENST00000471414 CFTRP13569 1480 aa-0.03□□□□□ -2.41
COPS3-206ENST00000471414 ZNF609O15014 1411 aa-0.04□□□□□ -2.42
COPS3-206ENST00000471414 KDM3BQ7LBC6 1761 aa-0.04□□□□□ -2.42
COPS3-206ENST00000471414 ARAP2Q8WZ64 1704 aa-0.04□□□□□ -2.42
COPS3-206ENST00000471414 IGSF10Q6WRI0 2623 aa-0.04□□□□□ -2.42
COPS3-206ENST00000471414 AHCTF1Q8WYP5 2266 aa-0.04□□□□□ -2.42
COPS3-206ENST00000471414 TRAV13-2A0A0B4J235 113 aa-0.04□□□□□ -2.42
COPS3-206ENST00000471414 PIGBOS1A0A0B4J2F0 54 aa-0.04□□□□□ -2.42
COPS3-206ENST00000471414 A0A0D9SFI3 127 aa-0.04□□□□□ -2.42
COPS3-206ENST00000471414 SPAARA0A1B0GVQ0 90 aa-0.04□□□□□ -2.42
COPS3-206ENST00000471414 HCG22E2RYF7 251 aa-0.04□□□□□ -2.42
COPS3-206ENST00000471414 CCL18P55774 89 aa-0.04□□□□□ -2.42
COPS3-206ENST00000471414 SELENOWP63302 87 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms