RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 ZNF818PQ6ZRF7 136 aa1.77□□□□□ -2.13
SMC5-202ENST00000471372 LINC00312Q9Y6C7 94 aa1.77□□□□□ -2.13
SMC5-202ENST00000471372 PHIPQ8WWQ0 1821 aa1.77□□□□□ -2.13
SMC5-202ENST00000471372 OOSP1A8MZH6 123 aa1.76□□□□□ -2.13
SMC5-202ENST00000471372 TNFP01375 233 aa1.76□□□□□ -2.13
SMC5-202ENST00000471372 GNG4P50150 75 aa1.76□□□□□ -2.13
SMC5-202ENST00000471372 WHAMMP3Q1A5X7 153 aa1.76□□□□□ -2.13
SMC5-202ENST00000471372 CGREF1Q99674 301 aa1.76□□□□□ -2.13
SMC5-202ENST00000471372 CASKIN1Q8WXD9 1431 aa1.75□□□□□ -2.13
SMC5-202ENST00000471372 A0A096LNT2 108 aa1.75□□□□□ -2.13
SMC5-202ENST00000471372 TRBV7-1A0A0A6YYK4 115 aa1.75□□□□□ -2.13
SMC5-202ENST00000471372 TRAV13-2A0A0B4J235 113 aa1.75□□□□□ -2.13
SMC5-202ENST00000471372 SPINK9Q5DT21 86 aa1.75□□□□□ -2.13
SMC5-202ENST00000471372 PPP3R2Q96LZ3 170 aa1.75□□□□□ -2.13
SMC5-202ENST00000471372 V9GYV3 84 aa1.75□□□□□ -2.13
SMC5-202ENST00000471372 PLXNA1Q9UIW2 1896 aa1.75□□□□□ -2.13
SMC5-202ENST00000471372 MYOM2P54296 1465 aa1.75□□□□□ -2.13
SMC5-202ENST00000471372 KTN1Q86UP2 1357 aaKnown RBP1.74□□□□□ -2.13
SMC5-202ENST00000471372 CUL7Q14999 1698 aa1.74□□□□□ -2.13
SMC5-202ENST00000471372 PIGBOS1A0A0B4J2F0 54 aa1.74□□□□□ -2.13
SMC5-202ENST00000471372 ZNF137PP52743 207 aa1.74□□□□□ -2.13
SMC5-202ENST00000471372 C6orf52Q5T4I8 152 aa1.74□□□□□ -2.13
SMC5-202ENST00000471372 C9orf153Q5TBE3 101 aa1.74□□□□□ -2.13
SMC5-202ENST00000471372 SIX6O95475 246 aa1.73□□□□□ -2.13
SMC5-202ENST00000471372 EDDM3BP56851 147 aa1.73□□□□□ -2.13
SMC5-202ENST00000471372 PPP3R1P63098 170 aa1.73□□□□□ -2.13
SMC5-202ENST00000471372 MRPS10P82664 201 aaKnown RBP1.73□□□□□ -2.13
SMC5-202ENST00000471372 KRTAP4-1Q9BYQ7 146 aa1.73□□□□□ -2.13
SMC5-202ENST00000471372 S100PP25815 95 aa1.72□□□□□ -2.13
SMC5-202ENST00000471372 Q96NJ1 140 aa1.72□□□□□ -2.13
SMC5-202ENST00000471372 FXYD6P3P58550 94 aa1.71□□□□□ -2.14
SMC5-202ENST00000471372 IER3IP1Q9Y5U9 82 aa1.71□□□□□ -2.14
SMC5-202ENST00000471372 ABCA1O95477 2261 aa1.71□□□□□ -2.14
SMC5-202ENST00000471372 PRB3Q04118 309 aaPredicted RBP1.7□□□□□ -2.14
SMC5-202ENST00000471372 C8orf59Q8N0T1 100 aaPredicted RBP1.7□□□□□ -2.14
SMC5-202ENST00000471372 ARAP2Q8WZ64 1704 aa1.7□□□□□ -2.14
SMC5-202ENST00000471372 ARFGEF1Q9Y6D6 1849 aa1.69□□□□□ -2.14
SMC5-202ENST00000471372 A0A0D9SG42 100 aa1.69□□□□□ -2.14
SMC5-202ENST00000471372 FAM135AQ9P2D6 1515 aa1.69□□□□□ -2.14
SMC5-202ENST00000471372 KNTC1P50748 2209 aa1.68□□□□□ -2.14
SMC5-202ENST00000471372 PARP14Q460N5 1801 aa1.68□□□□□ -2.14
SMC5-202ENST00000471372 CPSF1Q10570 1443 aaKnown RBP1.68□□□□□ -2.14
SMC5-202ENST00000471372 LOC285556D6RIA3 1793 aa1.68□□□□□ -2.14
SMC5-202ENST00000471372 KDM6BO15054 1643 aa1.68□□□□□ -2.14
SMC5-202ENST00000471372 MED13LQ71F56 2210 aa1.68□□□□□ -2.14
SMC5-202ENST00000471372 NWD2Q9ULI1 1742 aa1.68□□□□□ -2.14
SMC5-202ENST00000471372 C10orf128Q5T292 105 aa1.67□□□□□ -2.14
SMC5-202ENST00000471372 C5orf38Q86SI9 138 aa1.67□□□□□ -2.14
SMC5-202ENST00000471372 AQP10Q96PS8 301 aa1.67□□□□□ -2.14
SMC5-202ENST00000471372 C20orf202A1L168 122 aa1.66□□□□□ -2.14
SMC5-202ENST00000471372 SPANXDQ9BXN6 97 aa1.66□□□□□ -2.14
SMC5-202ENST00000471372 PZPP20742 1482 aa1.66□□□□□ -2.14
SMC5-202ENST00000471372 RIMS1Q86UR5 1692 aaKnown RBP1.66□□□□□ -2.14
SMC5-202ENST00000471372 MAP2P11137 1827 aaKnown RBP1.66□□□□□ -2.14
SMC5-202ENST00000471372 ROBO1Q9Y6N7 1651 aa1.65□□□□□ -2.15
SMC5-202ENST00000471372 TRGV1A0A0A0MS02 117 aa1.65□□□□□ -2.15
SMC5-202ENST00000471372 TTC9CQ8N5M4 171 aa1.65□□□□□ -2.15
SMC5-202ENST00000471372 C12orf57Q99622 126 aa1.65□□□□□ -2.15
SMC5-202ENST00000471372 F2Z2F3 143 aa1.64□□□□□ -2.15
SMC5-202ENST00000471372 ACYP2P14621 99 aa1.63□□□□□ -2.15
SMC5-202ENST00000471372 SVBPQ8N300 66 aa1.63□□□□□ -2.15
SMC5-202ENST00000471372 C14orf144Q96I85 54 aa1.63□□□□□ -2.15
SMC5-202ENST00000471372 WFDC6Q9BQY6 131 aa1.63□□□□□ -2.15
SMC5-202ENST00000471372 TANC1Q9C0D5 1861 aa1.63□□□□□ -2.15
SMC5-202ENST00000471372 PATJQ8NI35 1801 aa1.62□□□□□ -2.15
SMC5-202ENST00000471372 ATP6V1G2-DDX39BF2Z307 99 aa1.62□□□□□ -2.15
SMC5-202ENST00000471372 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.62□□□□□ -2.15
SMC5-202ENST00000471372 COMMD6Q7Z4G1 85 aa1.62□□□□□ -2.15
SMC5-202ENST00000471372 FBN3Q75N90 2809 aa1.62□□□□□ -2.15
SMC5-202ENST00000471372 DOCK1Q14185 1865 aa1.61□□□□□ -2.15
SMC5-202ENST00000471372 ASH1LQ9NR48 2969 aaKnown RBP1.61□□□□□ -2.15
SMC5-202ENST00000471372 PPIP5K1Q6PFW1 1433 aa1.61□□□□□ -2.15
SMC5-202ENST00000471372 GVQW2A0A096LPI5 108 aaPredicted RBP1.61□□□□□ -2.15
SMC5-202ENST00000471372 GTF2H5Q6ZYL4 71 aa1.61□□□□□ -2.15
SMC5-202ENST00000471372 TSLPQ969D9 159 aa1.61□□□□□ -2.15
SMC5-202ENST00000471372 TCEAL7Q9BRU2 100 aa1.61□□□□□ -2.15
SMC5-202ENST00000471372 LINC00474Q9P2X8 69 aa1.61□□□□□ -2.15
SMC5-202ENST00000471372 LRRC37A3O60309 1634 aa1.6□□□□□ -2.15
SMC5-202ENST00000471372 TENM1Q9UKZ4 2725 aa1.6□□□□□ -2.15
SMC5-202ENST00000471372 FAM24AA6NFZ4 105 aa1.6□□□□□ -2.15
SMC5-202ENST00000471372 SSSCA1O60232 199 aa1.6□□□□□ -2.15
SMC5-202ENST00000471372 PPP1R17O96001 155 aa1.6□□□□□ -2.15
SMC5-202ENST00000471372 IFITM1P13164 125 aa1.6□□□□□ -2.15
SMC5-202ENST00000471372 BPESC1Q9GZL8 116 aa1.6□□□□□ -2.15
SMC5-202ENST00000471372 DPH3P1Q9H4G8 78 aa1.6□□□□□ -2.15
SMC5-202ENST00000471372 TNS1Q9HBL0 1735 aaKnown RBP1.6□□□□□ -2.15
SMC5-202ENST00000471372 FCGBPQ9Y6R7 5405 aaPredicted RBP1.59□□□□□ -2.15
SMC5-202ENST00000471372 CYP4F30PQ9H0H9 118 aa1.59□□□□□ -2.15
SMC5-202ENST00000471372 SMIM11BQ8TCY0 68 aa1.58□□□□□ -2.16
SMC5-202ENST00000471372 SIPA1L3O60292 1781 aaPredicted RBP1.57□□□□□ -2.16
SMC5-202ENST00000471372 F5P12259 2224 aa1.57□□□□□ -2.16
SMC5-202ENST00000471372 TRAV1-2A0A0B4J238 106 aa1.57□□□□□ -2.16
SMC5-202ENST00000471372 UBE2L5PA0A1B0GUS4 154 aa1.57□□□□□ -2.16
SMC5-202ENST00000471372 UBE2L3P68036 154 aaKnown RBP1.57□□□□□ -2.16
SMC5-202ENST00000471372 HSD52Q0P140 79 aa1.57□□□□□ -2.16
SMC5-202ENST00000471372 VMO1Q7Z5L0 202 aa1.57□□□□□ -2.16
SMC5-202ENST00000471372 FAM103A1Q9BTL3 118 aaKnown RBP1.57□□□□□ -2.16
SMC5-202ENST00000471372 PXDNQ92626 1479 aa1.56□□□□□ -2.16
SMC5-202ENST00000471372 NRKQ7Z2Y5 1582 aa1.56□□□□□ -2.16
SMC5-202ENST00000471372 CCL18P55774 89 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms