RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 MYLKQ15746 1914 aa1.99□□□□□ -2.09
VPS50-209ENST00000467326 ALPK3Q96L96 1907 aa1.99□□□□□ -2.09
VPS50-209ENST00000467326 CFAP74Q9C0B2 1584 aa1.99□□□□□ -2.09
VPS50-209ENST00000467326 TRAV23DV6A0A075B6W5 121 aa1.99□□□□□ -2.09
VPS50-209ENST00000467326 HCG22E2RYF7 251 aa1.99□□□□□ -2.09
VPS50-209ENST00000467326 NUPR1O60356 82 aa1.99□□□□□ -2.09
VPS50-209ENST00000467326 COX6CP09669 75 aa1.99□□□□□ -2.09
VPS50-209ENST00000467326 PRB4P10163 310 aaPredicted RBP1.99□□□□□ -2.09
VPS50-209ENST00000467326 DMAC1Q96GE9 116 aa1.99□□□□□ -2.09
VPS50-209ENST00000467326 MANBALQ9NQG1 85 aa1.99□□□□□ -2.09
VPS50-209ENST00000467326 CDC42SE1Q9NRR8 79 aa1.99□□□□□ -2.09
VPS50-209ENST00000467326 TOP2AP11388 1531 aaKnown RBP1.99□□□□□ -2.09
VPS50-209ENST00000467326 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.99□□□□□ -2.09
VPS50-209ENST00000467326 SCN11AQ9UI33 1791 aa1.99□□□□□ -2.09
VPS50-209ENST00000467326 COL24A1Q17RW2 1714 aa1.99□□□□□ -2.09
VPS50-209ENST00000467326 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.99□□□□□ -2.09
VPS50-209ENST00000467326 CDK12Q9NYV4 1490 aaPredicted RBP1.99□□□□□ -2.09
VPS50-209ENST00000467326 HELZP42694 1942 aaKnown RBP1.99□□□□□ -2.09
VPS50-209ENST00000467326 MGAMO43451 1857 aa1.99□□□□□ -2.09
VPS50-209ENST00000467326 KIF14Q15058 1648 aa1.99□□□□□ -2.09
VPS50-209ENST00000467326 TIAM1Q13009 1591 aa1.98□□□□□ -2.09
VPS50-209ENST00000467326 TANC2Q9HCD6 1990 aa1.98□□□□□ -2.09
VPS50-209ENST00000467326 TRBV7-1A0A0A6YYK4 115 aa1.98□□□□□ -2.09
VPS50-209ENST00000467326 IGKV1-17P01599 117 aa1.98□□□□□ -2.09
VPS50-209ENST00000467326 IGLV3-19P01714 112 aa1.98□□□□□ -2.09
VPS50-209ENST00000467326 COX8AP10176 69 aa1.98□□□□□ -2.09
VPS50-209ENST00000467326 CNBPP62633 177 aaKnown RBP1.98□□□□□ -2.09
VPS50-209ENST00000467326 ZNF56Q15929 161 aa1.98□□□□□ -2.09
VPS50-209ENST00000467326 XAF1Q6GPH4 301 aa1.98□□□□□ -2.09
VPS50-209ENST00000467326 LYPD5Q6UWN5 251 aa1.98□□□□□ -2.09
VPS50-209ENST00000467326 ZNF818PQ6ZRF7 136 aa1.98□□□□□ -2.09
VPS50-209ENST00000467326 BAGE3Q86Y29 109 aa1.98□□□□□ -2.09
VPS50-209ENST00000467326 BAGE2Q86Y30 109 aa1.98□□□□□ -2.09
VPS50-209ENST00000467326 LIMD2Q9BT23 127 aa1.98□□□□□ -2.09
VPS50-209ENST00000467326 PRO1854Q9UHT4 67 aa1.98□□□□□ -2.09
VPS50-209ENST00000467326 SHANK2Q9UPX8 1470 aa1.98□□□□□ -2.09
VPS50-209ENST00000467326 ROBO1Q9Y6N7 1651 aa1.98□□□□□ -2.09
VPS50-209ENST00000467326 LRP5O75197 1615 aa1.98□□□□□ -2.09
VPS50-209ENST00000467326 ABCA9Q8IUA7 1624 aa1.98□□□□□ -2.09
VPS50-209ENST00000467326 MAP3K4Q9Y6R4 1608 aa1.98□□□□□ -2.09
VPS50-209ENST00000467326 UNC13BO14795 1591 aa1.98□□□□□ -2.09
VPS50-209ENST00000467326 LAMC3Q9Y6N6 1575 aa1.98□□□□□ -2.09
VPS50-209ENST00000467326 CDK13Q14004 1512 aaKnown RBP1.97□□□□□ -2.09
VPS50-209ENST00000467326 TOPAZ1Q8N9V7 1692 aa1.97□□□□□ -2.09
VPS50-209ENST00000467326 FXYD6-FXYD2A0A087WZ82 144 aa1.97□□□□□ -2.09
VPS50-209ENST00000467326 TRAV12-3A0A0B4J271 114 aa1.97□□□□□ -2.09
VPS50-209ENST00000467326 IGKV2-24A0A0C4DH68 120 aa1.97□□□□□ -2.09
VPS50-209ENST00000467326 CXorf51AA0A1B0GTR3 108 aa1.97□□□□□ -2.09
VPS50-209ENST00000467326 A0A1B0GWA3 101 aa1.97□□□□□ -2.09
VPS50-209ENST00000467326 P0C880 135 aa1.97□□□□□ -2.09
VPS50-209ENST00000467326 KLKP1Q107X0 134 aa1.97□□□□□ -2.09
VPS50-209ENST00000467326 PATE1Q8WXA2 126 aa1.97□□□□□ -2.09
VPS50-209ENST00000467326 FXYD6Q9H0Q3 95 aa1.97□□□□□ -2.09
VPS50-209ENST00000467326 HIGD1BQ9P298 99 aa1.97□□□□□ -2.09
VPS50-209ENST00000467326 CUL9Q8IWT3 2517 aa1.97□□□□□ -2.09
VPS50-209ENST00000467326 PLXNC1O60486 1568 aa1.97□□□□□ -2.09
VPS50-209ENST00000467326 ABCA8O94911 1581 aa1.97□□□□□ -2.09
VPS50-209ENST00000467326 LRRIQ1Q96JM4 1722 aa1.97□□□□□ -2.09
VPS50-209ENST00000467326 ABCA3Q99758 1704 aa1.97□□□□□ -2.09
VPS50-209ENST00000467326 CITO14578 2027 aa1.96□□□□□ -2.09
VPS50-209ENST00000467326 MALRD1Q5VYJ5 2156 aa1.96□□□□□ -2.1
VPS50-209ENST00000467326 TNRC6AQ8NDV7 1962 aaKnown RBP1.96□□□□□ -2.1
VPS50-209ENST00000467326 PTPRMP28827 1452 aa1.96□□□□□ -2.1
VPS50-209ENST00000467326 PPLO60437 1756 aa1.96□□□□□ -2.1
VPS50-209ENST00000467326 TRBV6-8A0A0A6YYG3 113 aa1.96□□□□□ -2.1
VPS50-209ENST00000467326 LOC285095A0A1B0GVY8 99 aa1.96□□□□□ -2.1
VPS50-209ENST00000467326 PRR9Q5T870 116 aa1.96□□□□□ -2.1
VPS50-209ENST00000467326 IFI27L1Q96BM0 104 aa1.96□□□□□ -2.1
VPS50-209ENST00000467326 FAM167A-AS1Q96KT0 104 aa1.96□□□□□ -2.1
VPS50-209ENST00000467326 ODF3Q96PU9 254 aa1.96□□□□□ -2.1
VPS50-209ENST00000467326 MRPL36Q9P0J6 103 aaKnown RBP1.96□□□□□ -2.1
VPS50-209ENST00000467326 GNG13Q9P2W3 67 aa1.96□□□□□ -2.1
VPS50-209ENST00000467326 CPAMD8Q8IZJ3 1885 aa1.96□□□□□ -2.1
VPS50-209ENST00000467326 ZFC3H1O60293 1989 aaKnown RBP1.96□□□□□ -2.1
VPS50-209ENST00000467326 DIP2BQ9P265 1576 aa1.95□□□□□ -2.1
VPS50-209ENST00000467326 TRBV7-3A0A075B6L6 115 aa1.95□□□□□ -2.1
VPS50-209ENST00000467326 A0A0G2JND7 137 aa1.95□□□□□ -2.1
VPS50-209ENST00000467326 A0A0G2JQZ4 141 aa1.95□□□□□ -2.1
VPS50-209ENST00000467326 A0A0J9YY99 117 aa1.95□□□□□ -2.1
VPS50-209ENST00000467326 NUPR2A6NF83 97 aa1.95□□□□□ -2.1
VPS50-209ENST00000467326 ZNF815PA8K554 130 aa1.95□□□□□ -2.1
VPS50-209ENST00000467326 FXYD1O00168 92 aa1.95□□□□□ -2.1
VPS50-209ENST00000467326 HMGN2P05204 90 aaKnown RBP1.95□□□□□ -2.1
VPS50-209ENST00000467326 EDDM3BP56851 147 aa1.95□□□□□ -2.1
VPS50-209ENST00000467326 C10orf128Q5T292 105 aa1.95□□□□□ -2.1
VPS50-209ENST00000467326 ATP5EP2Q5VTU8 51 aa1.95□□□□□ -2.1
VPS50-209ENST00000467326 VMO1Q7Z5L0 202 aa1.95□□□□□ -2.1
VPS50-209ENST00000467326 LINC00474Q9P2X8 69 aa1.95□□□□□ -2.1
VPS50-209ENST00000467326 KLK9Q9UKQ9 250 aa1.95□□□□□ -2.1
VPS50-209ENST00000467326 ARL2-SNX15V9GYD0 113 aa1.95□□□□□ -2.1
VPS50-209ENST00000467326 V9GYH0 126 aa1.95□□□□□ -2.1
VPS50-209ENST00000467326 LTN1O94822 1766 aa1.95□□□□□ -2.1
VPS50-209ENST00000467326 CCDC88CQ9P219 2028 aa1.95□□□□□ -2.1
VPS50-209ENST00000467326 TNS1Q9HBL0 1735 aaKnown RBP1.94□□□□□ -2.1
VPS50-209ENST00000467326 MCM3APO60318 1980 aa1.94□□□□□ -2.1
VPS50-209ENST00000467326 SBF2Q86WG5 1849 aa1.94□□□□□ -2.1
VPS50-209ENST00000467326 TRBV25-1A0A075B6N4 114 aa1.94□□□□□ -2.1
VPS50-209ENST00000467326 CEBPZOSA8MTT3 80 aa1.94□□□□□ -2.1
VPS50-209ENST00000467326 H7BZZ5 65 aa1.94□□□□□ -2.1
VPS50-209ENST00000467326 C3orf79P0CE67 100 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms