RNA–Protein interactions for RNA: ENST00000467152.1

PDE6B-206, Transcript of phosphodiesterase 6B, humanhuman

TSL 1 (best)

Gene PDE6B, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-206ENST00000467152 OSTCQ9NRP0 149 aa12.58□□□□□ -0.4
PDE6B-206ENST00000467152 K7EP13 123 aa12.57□□□□□ -0.4
PDE6B-206ENST00000467152 FOXA3P55318 350 aaPredicted RBP12.57□□□□□ -0.4
PDE6B-206ENST00000467152 CT83Q5H943 113 aa12.57□□□□□ -0.4
PDE6B-206ENST00000467152 TNFRSF18Q9Y5U5 241 aa12.57□□□□□ -0.4
PDE6B-206ENST00000467152 TRGC1P0CF51 173 aa12.56□□□□□ -0.4
PDE6B-206ENST00000467152 RPL23P62829 140 aaKnown RBP12.56□□□□□ -0.4
PDE6B-206ENST00000467152 LINC01556Q5JQF7 62 aa12.56□□□□□ -0.4
PDE6B-206ENST00000467152 Q6ZRN7 208 aaPredicted RBP12.56□□□□□ -0.4
PDE6B-206ENST00000467152 A0A087WWC5 75 aa12.55□□□□□ -0.4
PDE6B-206ENST00000467152 TWIST1Q15672 202 aa12.55□□□□□ -0.4
PDE6B-206ENST00000467152 Q8N1X5 172 aa12.55□□□□□ -0.4
PDE6B-206ENST00000467152 ISOC2Q96AB3 205 aa12.55□□□□□ -0.4
PDE6B-206ENST00000467152 M0QY20 66 aa12.54□□□□□ -0.4
PDE6B-206ENST00000467152 MGPP08493 103 aa12.54□□□□□ -0.4
PDE6B-206ENST00000467152 RAB14P61106 215 aa12.54□□□□□ -0.4
PDE6B-206ENST00000467152 PGLYRP4Q96LB8 373 aa12.54□□□□□ -0.4
PDE6B-206ENST00000467152 DPH3P1Q9H4G8 78 aa12.54□□□□□ -0.4
PDE6B-206ENST00000467152 NAT8Q9UHE5 227 aa12.54□□□□□ -0.4
PDE6B-206ENST00000467152 IFITM2Q01629 132 aa12.53□□□□□ -0.4
PDE6B-206ENST00000467152 SUMO4Q6EEV6 95 aa12.53□□□□□ -0.4
PDE6B-206ENST00000467152 C10orf126Q8N4M7 172 aa12.53□□□□□ -0.4
PDE6B-206ENST00000467152 TSKUQ8WUA8 353 aa12.53□□□□□ -0.4
PDE6B-206ENST00000467152 V9GYV3 84 aa12.53□□□□□ -0.4
PDE6B-206ENST00000467152 APOBP04114 4563 aaKnown RBP12.53□□□□□ -0.4
PDE6B-206ENST00000467152 IGHV3-30P01768 117 aa12.52□□□□□ -0.41
PDE6B-206ENST00000467152 IGHV3-33P01772 117 aa12.52□□□□□ -0.41
PDE6B-206ENST00000467152 IGHV3-30-3P0DP02 117 aa12.52□□□□□ -0.41
PDE6B-206ENST00000467152 IGHV3-30-5P0DP03 117 aa12.52□□□□□ -0.41
PDE6B-206ENST00000467152 SPATA12Q7Z6I5 190 aa12.52□□□□□ -0.41
PDE6B-206ENST00000467152 GFRA4Q9GZZ7 299 aa12.52□□□□□ -0.41
PDE6B-206ENST00000467152 FAM231BA6NCW3 169 aa12.51□□□□□ -0.41
PDE6B-206ENST00000467152 IBA57-AS1B1ANH7 110 aa12.51□□□□□ -0.41
PDE6B-206ENST00000467152 ADIRFQ15847 76 aa12.51□□□□□ -0.41
PDE6B-206ENST00000467152 CLLU1Q5K131 121 aa12.51□□□□□ -0.41
PDE6B-206ENST00000467152 Q8N3U1 123 aa12.51□□□□□ -0.41
PDE6B-206ENST00000467152 C15orf54Q8N8G6 183 aa12.51□□□□□ -0.41
PDE6B-206ENST00000467152 H7C1H1 209 aa12.5□□□□□ -0.41
PDE6B-206ENST00000467152 NFE4Q86UQ8 179 aa12.5□□□□□ -0.41
PDE6B-206ENST00000467152 DNAJC30Q96LL9 226 aa12.5□□□□□ -0.41
PDE6B-206ENST00000467152 DNAH5Q8TE73 4624 aa12.49□□□□□ -0.41
PDE6B-206ENST00000467152 HIGD1CA8MV81 97 aa12.49□□□□□ -0.41
PDE6B-206ENST00000467152 RASL11AQ6T310 242 aa12.49□□□□□ -0.41
PDE6B-206ENST00000467152 TRBV6-8A0A0A6YYG3 113 aa12.48□□□□□ -0.41
PDE6B-206ENST00000467152 DAZ4Q86SG3 579 aaKnown RBP12.48□□□□□ -0.41
PDE6B-206ENST00000467152 NIT1Q86X76 327 aa12.48□□□□□ -0.41
PDE6B-206ENST00000467152 DAZ3Q9NR90 486 aaKnown RBP12.48□□□□□ -0.41
PDE6B-206ENST00000467152 A0A1B0GUT8 65 aa12.47□□□□□ -0.41
PDE6B-206ENST00000467152 NTM-AS1Q6ZSK4 140 aa12.47□□□□□ -0.41
PDE6B-206ENST00000467152 SMIM15Q7Z3B0 74 aa12.47□□□□□ -0.41
PDE6B-206ENST00000467152 GATD1Q8NB37 220 aa12.47□□□□□ -0.41
PDE6B-206ENST00000467152 NIT2Q9NQR4 276 aa12.47□□□□□ -0.41
PDE6B-206ENST00000467152 NUP35Q8NFH5 326 aa12.46□□□□□ -0.41
PDE6B-206ENST00000467152 TMEM97Q5BJF2 176 aa12.45□□□□□ -0.42
PDE6B-206ENST00000467152 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.45□□□□□ -0.42
PDE6B-206ENST00000467152 BORCS7Q96B45 105 aa12.45□□□□□ -0.42
PDE6B-206ENST00000467152 TRAV26-2A0A0B4J265 109 aa12.44□□□□□ -0.42
PDE6B-206ENST00000467152 SMIM27A0A1W2PRY6 76 aa12.44□□□□□ -0.42
PDE6B-206ENST00000467152 FRZBQ92765 325 aa12.44□□□□□ -0.42
PDE6B-206ENST00000467152 KRTAP10-2P60368 255 aa12.43□□□□□ -0.42
PDE6B-206ENST00000467152 LAGE3Q14657 143 aa12.43□□□□□ -0.42
PDE6B-206ENST00000467152 TMEM191AQ9H0A3 160 aa12.43□□□□□ -0.42
PDE6B-206ENST00000467152 Q9HAA7 133 aa12.43□□□□□ -0.42
PDE6B-206ENST00000467152 DMBT1Q9UGM3 2413 aaPredicted RBP12.42□□□□□ -0.42
PDE6B-206ENST00000467152 RIGQ13278 110 aa12.42□□□□□ -0.42
PDE6B-206ENST00000467152 CHCHD7Q9BUK0 85 aa12.42□□□□□ -0.42
PDE6B-206ENST00000467152 NAT8BQ9UHF3 227 aa12.42□□□□□ -0.42
PDE6B-206ENST00000467152 URGCP-MRPS24S4R325 110 aa12.42□□□□□ -0.42
PDE6B-206ENST00000467152 A0A087WX48 190 aa12.41□□□□□ -0.42
PDE6B-206ENST00000467152 TMEM262E9PQX1 116 aa12.41□□□□□ -0.42
PDE6B-206ENST00000467152 IQCJQ1A5X6 159 aa12.41□□□□□ -0.42
PDE6B-206ENST00000467152 RNF185Q96GF1 192 aa12.41□□□□□ -0.42
PDE6B-206ENST00000467152 A0A087WTM6 91 aa12.4□□□□□ -0.42
PDE6B-206ENST00000467152 RPL39LQ96EH5 51 aaKnown RBP12.4□□□□□ -0.42
PDE6B-206ENST00000467152 CHCHD5Q9BSY4 110 aa12.4□□□□□ -0.42
PDE6B-206ENST00000467152 KLK12Q9UKR0 248 aa12.4□□□□□ -0.42
PDE6B-206ENST00000467152 TRBV25-1A0A075B6N4 114 aa12.39□□□□□ -0.43
PDE6B-206ENST00000467152 TRAV8-3A0A0A6YYJ7 113 aa12.39□□□□□ -0.43
PDE6B-206ENST00000467152 GAS8-AS1O95177 125 aa12.39□□□□□ -0.43
PDE6B-206ENST00000467152 RAB4AP20338 218 aa12.39□□□□□ -0.43
PDE6B-206ENST00000467152 KCNIP4Q6PIL6 250 aa12.39□□□□□ -0.43
PDE6B-206ENST00000467152 IGHV1-24A0A0C4DH33 117 aa12.38□□□□□ -0.43
PDE6B-206ENST00000467152 ELOBQ15370 118 aa12.38□□□□□ -0.43
PDE6B-206ENST00000467152 MPV17L2Q567V2 206 aa12.38□□□□□ -0.43
PDE6B-206ENST00000467152 ATRAIDQ6UW56 229 aa12.38□□□□□ -0.43
PDE6B-206ENST00000467152 DEFB104AQ8WTQ1 72 aa12.38□□□□□ -0.43
PDE6B-206ENST00000467152 LRCOL1A6NCL2 159 aa12.37□□□□□ -0.43
PDE6B-206ENST00000467152 EREGO14944 169 aa12.37□□□□□ -0.43
PDE6B-206ENST00000467152 PKIAP61925 76 aa12.37□□□□□ -0.43
PDE6B-206ENST00000467152 PNRC1Q12796 327 aaPredicted RBP12.37□□□□□ -0.43
PDE6B-206ENST00000467152 GAGE6Q13070 117 aa12.37□□□□□ -0.43
PDE6B-206ENST00000467152 CDPF1Q6NVV7 123 aa12.37□□□□□ -0.43
PDE6B-206ENST00000467152 AMN1Q8IY45 258 aa12.37□□□□□ -0.43
PDE6B-206ENST00000467152 TM2D2Q9BX73 214 aa12.37□□□□□ -0.43
PDE6B-206ENST00000467152 TRBV6-5A0A0K0K1A5 114 aa12.36□□□□□ -0.43
PDE6B-206ENST00000467152 EPM2AB3EWF7 344 aa12.36□□□□□ -0.43
PDE6B-206ENST00000467152 PPP1R2P9O14990 202 aa12.36□□□□□ -0.43
PDE6B-206ENST00000467152 PSCAO43653 123 aa12.36□□□□□ -0.43
PDE6B-206ENST00000467152 UQCC3Q6UW78 93 aa12.36□□□□□ -0.43
PDE6B-206ENST00000467152 PGPEP1Q9NXJ5 209 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms