RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 TMEM262E9PQX1 116 aa6.83□□□□□ -1.32
CD40-204ENST00000466205 TMEM250H0YL14 139 aa6.83□□□□□ -1.32
CD40-204ENST00000466205 GATCO43716 136 aaKnown RBP6.83□□□□□ -1.32
CD40-204ENST00000466205 SRP19P09132 144 aaKnown RBP6.83□□□□□ -1.32
CD40-204ENST00000466205 NTF3P20783 257 aa6.83□□□□□ -1.32
CD40-204ENST00000466205 SRSF3P84103 164 aaKnown RBP6.83□□□□□ -1.32
CD40-204ENST00000466205 TWIST1Q15672 202 aa6.83□□□□□ -1.32
CD40-204ENST00000466205 SUMO4Q6EEV6 95 aa6.83□□□□□ -1.32
CD40-204ENST00000466205 DNAJC30Q96LL9 226 aa6.83□□□□□ -1.32
CD40-204ENST00000466205 SMIM7Q9BQ49 75 aa6.83□□□□□ -1.32
CD40-204ENST00000466205 URGCP-MRPS24S4R325 110 aa6.83□□□□□ -1.32
CD40-204ENST00000466205 APOBP04114 4563 aaKnown RBP6.83□□□□□ -1.32
CD40-204ENST00000466205 A0A087WWC5 75 aa6.82□□□□□ -1.32
CD40-204ENST00000466205 ZNF727A8MUV8 499 aa6.82□□□□□ -1.32
CD40-204ENST00000466205 F2Z2F3 143 aa6.82□□□□□ -1.32
CD40-204ENST00000466205 EREGO14944 169 aa6.82□□□□□ -1.32
CD40-204ENST00000466205 NIT1Q86X76 327 aa6.82□□□□□ -1.32
CD40-204ENST00000466205 SLC7A5P1Q8MH63 180 aa6.82□□□□□ -1.32
CD40-204ENST00000466205 OR10G8Q8NGN5 311 aa6.82□□□□□ -1.32
CD40-204ENST00000466205 GTSF1Q8WW33 167 aa6.82□□□□□ -1.32
CD40-204ENST00000466205 KRTAP3-3Q9BYR6 98 aa6.82□□□□□ -1.32
CD40-204ENST00000466205 KRTAP3-2Q9BYR7 98 aa6.82□□□□□ -1.32
CD40-204ENST00000466205 KLK12Q9UKR0 248 aa6.82□□□□□ -1.32
CD40-204ENST00000466205 TRAV26-2A0A0B4J265 109 aa6.81□□□□□ -1.32
CD40-204ENST00000466205 C9JQL5 133 aa6.81□□□□□ -1.32
CD40-204ENST00000466205 K7EP13 123 aa6.81□□□□□ -1.32
CD40-204ENST00000466205 LECT2O14960 151 aa6.81□□□□□ -1.32
CD40-204ENST00000466205 TRGC1P0CF51 173 aa6.81□□□□□ -1.32
CD40-204ENST00000466205 CTRLP40313 264 aa6.81□□□□□ -1.32
CD40-204ENST00000466205 FOXA3P55318 350 aaPredicted RBP6.81□□□□□ -1.32
CD40-204ENST00000466205 LINC01551Q86U37 167 aa6.81□□□□□ -1.32
CD40-204ENST00000466205 PGLYRP4Q96LB8 373 aa6.81□□□□□ -1.32
CD40-204ENST00000466205 DPH3P1Q9H4G8 78 aa6.81□□□□□ -1.32
CD40-204ENST00000466205 A0A087WX48 190 aa6.8□□□□□ -1.32
CD40-204ENST00000466205 TRBV6-8A0A0A6YYG3 113 aa6.8□□□□□ -1.32
CD40-204ENST00000466205 M0QY20 66 aa6.8□□□□□ -1.32
CD40-204ENST00000466205 RAB14P61106 215 aa6.8□□□□□ -1.32
CD40-204ENST00000466205 KCNIP4Q6PIL6 250 aa6.8□□□□□ -1.32
CD40-204ENST00000466205 NTM-AS1Q6ZSK4 140 aa6.8□□□□□ -1.32
CD40-204ENST00000466205 UBE2WQ96B02 151 aa6.8□□□□□ -1.32
CD40-204ENST00000466205 CHCHD5Q9BSY4 110 aa6.8□□□□□ -1.32
CD40-204ENST00000466205 HSPG2P98160 4391 aa6.79□□□□□ -1.32
CD40-204ENST00000466205 GAGE6Q13070 117 aa6.79□□□□□ -1.32
CD40-204ENST00000466205 WFDC2Q14508 124 aa6.79□□□□□ -1.32
CD40-204ENST00000466205 MPV17L2Q567V2 206 aa6.79□□□□□ -1.32
CD40-204ENST00000466205 CLPSL2Q6UWE3 100 aa6.79□□□□□ -1.32
CD40-204ENST00000466205 COMMD7Q86VX2 200 aa6.79□□□□□ -1.32
CD40-204ENST00000466205 Q8N976 141 aa6.79□□□□□ -1.32
CD40-204ENST00000466205 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.79□□□□□ -1.32
CD40-204ENST00000466205 IGKV2D-24A0A075B6R9 120 aa6.78□□□□□ -1.32
CD40-204ENST00000466205 LRCOL1A6NCL2 159 aa6.78□□□□□ -1.32
CD40-204ENST00000466205 H7C1H1 209 aa6.78□□□□□ -1.32
CD40-204ENST00000466205 LAGE3Q14657 143 aa6.78□□□□□ -1.32
CD40-204ENST00000466205 ADIRFQ15847 76 aa6.78□□□□□ -1.32
CD40-204ENST00000466205 RASL11AQ6T310 242 aa6.78□□□□□ -1.32
CD40-204ENST00000466205 FAM231DQ6ZW35 169 aa6.78□□□□□ -1.32
CD40-204ENST00000466205 C15orf54Q8N8G6 183 aa6.78□□□□□ -1.32
CD40-204ENST00000466205 ABCA13Q86UQ4 5058 aa6.77□□□□□ -1.33
CD40-204ENST00000466205 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.77□□□□□ -1.33
CD40-204ENST00000466205 TRBV25-1A0A075B6N4 114 aa6.77□□□□□ -1.33
CD40-204ENST00000466205 TRAV8-3A0A0A6YYJ7 113 aa6.77□□□□□ -1.33
CD40-204ENST00000466205 A8MWL6 223 aa6.77□□□□□ -1.33
CD40-204ENST00000466205 ANGP03950 147 aaKnown RBP6.77□□□□□ -1.33
CD40-204ENST00000466205 RPL23P62829 140 aaKnown RBP6.77□□□□□ -1.33
CD40-204ENST00000466205 PEA15Q15121 130 aa6.77□□□□□ -1.33
CD40-204ENST00000466205 NDUFA5Q16718 116 aa6.77□□□□□ -1.33
CD40-204ENST00000466205 Q8N814 137 aa6.77□□□□□ -1.33
CD40-204ENST00000466205 MAPKAPK5-AS1Q8N8E1 139 aa6.77□□□□□ -1.33
CD40-204ENST00000466205 GATD1Q8NB37 220 aa6.77□□□□□ -1.33
CD40-204ENST00000466205 BAALCQ8WXS3 180 aa6.77□□□□□ -1.33
CD40-204ENST00000466205 BORCS7Q96B45 105 aa6.77□□□□□ -1.33
CD40-204ENST00000466205 RPL39LQ96EH5 51 aaKnown RBP6.77□□□□□ -1.33
CD40-204ENST00000466205 CNFNQ9BYD5 112 aa6.77□□□□□ -1.33
CD40-204ENST00000466205 PGPEP1Q9NXJ5 209 aa6.77□□□□□ -1.33
CD40-204ENST00000466205 IGLV5-52A0A0A0MRZ9 124 aa6.76□□□□□ -1.33
CD40-204ENST00000466205 HIGD1CA8MV81 97 aa6.76□□□□□ -1.33
CD40-204ENST00000466205 CRPP02741 224 aa6.76□□□□□ -1.33
CD40-204ENST00000466205 KRTAP10-1P60331 282 aa6.76□□□□□ -1.33
CD40-204ENST00000466205 HAMPP81172 84 aa6.76□□□□□ -1.33
CD40-204ENST00000466205 TMEM241Q24JQ0 296 aa6.76□□□□□ -1.33
CD40-204ENST00000466205 WDR73Q6P4I2 378 aa6.76□□□□□ -1.33
CD40-204ENST00000466205 ATRAIDQ6UW56 229 aa6.76□□□□□ -1.33
CD40-204ENST00000466205 SMIM15Q7Z3B0 74 aa6.76□□□□□ -1.33
CD40-204ENST00000466205 TSKUQ8WUA8 353 aa6.76□□□□□ -1.33
CD40-204ENST00000466205 ISOC2Q96AB3 205 aa6.76□□□□□ -1.33
CD40-204ENST00000466205 TM2D2Q9BX73 214 aa6.76□□□□□ -1.33
CD40-204ENST00000466205 NIT2Q9NQR4 276 aa6.76□□□□□ -1.33
CD40-204ENST00000466205 IGHV1-24A0A0C4DH33 117 aa6.75□□□□□ -1.33
CD40-204ENST00000466205 NDUFS6O75380 124 aaKnown RBP6.75□□□□□ -1.33
CD40-204ENST00000466205 CDK2AP2O75956 126 aa6.75□□□□□ -1.33
CD40-204ENST00000466205 GAS8-AS1O95177 125 aa6.75□□□□□ -1.33
CD40-204ENST00000466205 ADCYAP1P18509 176 aa6.75□□□□□ -1.33
CD40-204ENST00000466205 ELOBQ15370 118 aa6.75□□□□□ -1.33
CD40-204ENST00000466205 CT83Q5H943 113 aa6.75□□□□□ -1.33
CD40-204ENST00000466205 ENHOQ6UWT2 76 aa6.75□□□□□ -1.33
CD40-204ENST00000466205 OSTCQ9NRP0 149 aa6.75□□□□□ -1.33
CD40-204ENST00000466205 NAT8Q9UHE5 227 aa6.75□□□□□ -1.33
CD40-204ENST00000466205 V9GYV3 84 aa6.75□□□□□ -1.33
CD40-204ENST00000466205 GCSHP23434 173 aa6.74□□□□□ -1.33
CD40-204ENST00000466205 RBX1P62877 108 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 499.6 ms