RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 PEA15Q15121 130 aa8.88□□□□□ -0.99
R3HDM1-213ENST00000463230 TPPP3Q9BW30 176 aa8.88□□□□□ -0.99
R3HDM1-213ENST00000463230 ZNF727A8MUV8 499 aa8.87□□□□□ -0.99
R3HDM1-213ENST00000463230 GATCO43716 136 aaKnown RBP8.87□□□□□ -0.99
R3HDM1-213ENST00000463230 UBE2D3P61077 147 aa8.87□□□□□ -0.99
R3HDM1-213ENST00000463230 UBE2D2P62837 147 aa8.87□□□□□ -0.99
R3HDM1-213ENST00000463230 LYZL1Q6UWQ5 148 aa8.87□□□□□ -0.99
R3HDM1-213ENST00000463230 RNASE7Q9H1E1 156 aaKnown RBP8.87□□□□□ -0.99
R3HDM1-213ENST00000463230 A8MWL6 223 aa8.86□□□□□ -0.99
R3HDM1-213ENST00000463230 H7C1H1 209 aa8.86□□□□□ -0.99
R3HDM1-213ENST00000463230 CEBPGP53567 150 aa8.86□□□□□ -0.99
R3HDM1-213ENST00000463230 MSRB1Q9NZV6 116 aa8.86□□□□□ -0.99
R3HDM1-213ENST00000463230 TMEM97Q5BJF2 176 aa8.86□□□□□ -0.99
R3HDM1-213ENST00000463230 LINC01551Q86U37 167 aa8.86□□□□□ -0.99
R3HDM1-213ENST00000463230 DNAJC30Q96LL9 226 aa8.86□□□□□ -0.99
R3HDM1-213ENST00000463230 MUC21A0A0G2JKD1 596 aa8.85□□□□□ -0.99
R3HDM1-213ENST00000463230 MUC21A0A140T8X8 626 aa8.85□□□□□ -0.99
R3HDM1-213ENST00000463230 F5H697 171 aa8.85□□□□□ -0.99
R3HDM1-213ENST00000463230 Q6ZRN7 208 aaPredicted RBP8.85□□□□□ -0.99
R3HDM1-213ENST00000463230 DPH3P1Q9H4G8 78 aa8.85□□□□□ -0.99
R3HDM1-213ENST00000463230 OSTCQ9NRP0 149 aa8.85□□□□□ -0.99
R3HDM1-213ENST00000463230 FAM231BA6NCW3 169 aa8.85□□□□□ -0.99
R3HDM1-213ENST00000463230 FOXA3P55318 350 aaPredicted RBP8.85□□□□□ -0.99
R3HDM1-213ENST00000463230 ERVFC1-1P60608 527 aa8.85□□□□□ -0.99
R3HDM1-213ENST00000463230 LAGE3Q14657 143 aa8.85□□□□□ -0.99
R3HDM1-213ENST00000463230 NEXN-AS1Q8NBZ9 246 aa8.85□□□□□ -0.99
R3HDM1-213ENST00000463230 CHCHD7Q9BUK0 85 aa8.85□□□□□ -0.99
R3HDM1-213ENST00000463230 GFRA4Q9GZZ7 299 aa8.85□□□□□ -0.99
R3HDM1-213ENST00000463230 HECTD4Q9Y4D8 3996 aa8.84□□□□□ -0.99
R3HDM1-213ENST00000463230 IBA57-AS1B1ANH7 110 aa8.84□□□□□ -0.99
R3HDM1-213ENST00000463230 PKIAP61925 76 aa8.84□□□□□ -0.99
R3HDM1-213ENST00000463230 TMEM241Q24JQ0 296 aa8.84□□□□□ -0.99
R3HDM1-213ENST00000463230 Q9UF83 564 aa8.84□□□□□ -0.99
R3HDM1-213ENST00000463230 PRSS47A8MTI9 375 aa8.84□□□□□ -0.99
R3HDM1-213ENST00000463230 NTF3P20783 257 aa8.84□□□□□ -0.99
R3HDM1-213ENST00000463230 DAZ4Q86SG3 579 aaKnown RBP8.84□□□□□ -0.99
R3HDM1-213ENST00000463230 DAZ3Q9NR90 486 aaKnown RBP8.84□□□□□ -0.99
R3HDM1-213ENST00000463230 C15orf54Q8N8G6 183 aa8.83□□□□□ -1
R3HDM1-213ENST00000463230 FRZBQ92765 325 aa8.83□□□□□ -1
R3HDM1-213ENST00000463230 FAT2Q9NYQ8 4349 aa8.83□□□□□ -1
R3HDM1-213ENST00000463230 DNAH2Q9P225 4427 aa8.83□□□□□ -1
R3HDM1-213ENST00000463230 M0QY20 66 aa8.82□□□□□ -1
R3HDM1-213ENST00000463230 ATRAIDQ6UW56 229 aa8.82□□□□□ -1
R3HDM1-213ENST00000463230 SMIM15Q7Z3B0 74 aa8.82□□□□□ -1
R3HDM1-213ENST00000463230 TSKUQ8WUA8 353 aa8.82□□□□□ -1
R3HDM1-213ENST00000463230 GTSF1Q8WW33 167 aa8.82□□□□□ -1
R3HDM1-213ENST00000463230 BORCS7Q96B45 105 aa8.82□□□□□ -1
R3HDM1-213ENST00000463230 NAT8Q9UHE5 227 aa8.82□□□□□ -1
R3HDM1-213ENST00000463230 LCE2BO14633 110 aa8.82□□□□□ -1
R3HDM1-213ENST00000463230 APOC3P02656 99 aa8.82□□□□□ -1
R3HDM1-213ENST00000463230 MGPP08493 103 aa8.82□□□□□ -1
R3HDM1-213ENST00000463230 SSTP61278 116 aa8.82□□□□□ -1
R3HDM1-213ENST00000463230 TWIST1Q15672 202 aa8.82□□□□□ -1
R3HDM1-213ENST00000463230 SUMO4Q6EEV6 95 aa8.81□□□□□ -1
R3HDM1-213ENST00000463230 ISOC2Q96AB3 205 aa8.81□□□□□ -1
R3HDM1-213ENST00000463230 TNFRSF18Q9Y5U5 241 aa8.81□□□□□ -1
R3HDM1-213ENST00000463230 SRSF3P84103 164 aaKnown RBP8.81□□□□□ -1
R3HDM1-213ENST00000463230 ELOBQ15370 118 aa8.81□□□□□ -1
R3HDM1-213ENST00000463230 RASL11AQ6T310 242 aa8.81□□□□□ -1
R3HDM1-213ENST00000463230 URGCP-MRPS24S4R325 110 aa8.81□□□□□ -1
R3HDM1-213ENST00000463230 TRBV6-8A0A0A6YYG3 113 aa8.8□□□□□ -1
R3HDM1-213ENST00000463230 KCNIP4Q6PIL6 250 aa8.8□□□□□ -1
R3HDM1-213ENST00000463230 NIT1Q86X76 327 aa8.8□□□□□ -1
R3HDM1-213ENST00000463230 C9JQL5 133 aa8.8□□□□□ -1
R3HDM1-213ENST00000463230 IGHV3-30P01768 117 aa8.8□□□□□ -1
R3HDM1-213ENST00000463230 IGHV3-33P01772 117 aa8.8□□□□□ -1
R3HDM1-213ENST00000463230 IGHV3-30-3P0DP02 117 aa8.8□□□□□ -1
R3HDM1-213ENST00000463230 IGHV3-30-5P0DP03 117 aa8.8□□□□□ -1
R3HDM1-213ENST00000463230 RPL23P62829 140 aaKnown RBP8.8□□□□□ -1
R3HDM1-213ENST00000463230 TM2D2Q9BX73 214 aa8.8□□□□□ -1
R3HDM1-213ENST00000463230 TRAV8-3A0A0A6YYJ7 113 aa8.79□□□□□ -1
R3HDM1-213ENST00000463230 NIT2Q9NQR4 276 aa8.79□□□□□ -1
R3HDM1-213ENST00000463230 V9GYV3 84 aa8.79□□□□□ -1
R3HDM1-213ENST00000463230 A0A1B0GUT8 65 aa8.78□□□□□ -1
R3HDM1-213ENST00000463230 PGLYRP4Q96LB8 373 aa8.78□□□□□ -1
R3HDM1-213ENST00000463230 MRPL18Q9H0U6 180 aaKnown RBP8.78□□□□□ -1
R3HDM1-213ENST00000463230 ADCYAP1P18509 176 aa8.78□□□□□ -1
R3HDM1-213ENST00000463230 RMI2Q96E14 147 aa8.78□□□□□ -1
R3HDM1-213ENST00000463230 COX11Q9Y6N1 276 aa8.78□□□□□ -1
R3HDM1-213ENST00000463230 A0A087WX48 190 aa8.77□□□□□ -1.01
R3HDM1-213ENST00000463230 HIGD1CA8MV81 97 aa8.77□□□□□ -1.01
R3HDM1-213ENST00000463230 ADIRFQ15847 76 aa8.77□□□□□ -1.01
R3HDM1-213ENST00000463230 RIGQ13278 110 aa8.77□□□□□ -1.01
R3HDM1-213ENST00000463230 TRBV25-1A0A075B6N4 114 aa8.76□□□□□ -1.01
R3HDM1-213ENST00000463230 IQCJQ1A5X6 159 aa8.76□□□□□ -1.01
R3HDM1-213ENST00000463230 TMEM191AQ9H0A3 160 aa8.76□□□□□ -1.01
R3HDM1-213ENST00000463230 NAT8BQ9UHF3 227 aa8.76□□□□□ -1.01
R3HDM1-213ENST00000463230 A0A087WTM6 91 aa8.76□□□□□ -1.01
R3HDM1-213ENST00000463230 IGHV1-24A0A0C4DH33 117 aa8.76□□□□□ -1.01
R3HDM1-213ENST00000463230 LOC105371267A0A1B0GV96 52 aa8.76□□□□□ -1.01
R3HDM1-213ENST00000463230 C16orf90A8MZG2 172 aa8.76□□□□□ -1.01
R3HDM1-213ENST00000463230 PSCAO43653 123 aa8.76□□□□□ -1.01
R3HDM1-213ENST00000463230 SPATA12Q7Z6I5 190 aa8.76□□□□□ -1.01
R3HDM1-213ENST00000463230 PKD1P98161 4303 aa8.75□□□□□ -1.01
R3HDM1-213ENST00000463230 A0A1B0GW15 77 aa8.75□□□□□ -1.01
R3HDM1-213ENST00000463230 TMEM218A2RU14 115 aa8.75□□□□□ -1.01
R3HDM1-213ENST00000463230 SMIM27A0A1W2PRY6 76 aa8.74□□□□□ -1.01
R3HDM1-213ENST00000463230 Q0VG73 95 aa8.74□□□□□ -1.01
R3HDM1-213ENST00000463230 NTM-AS1Q6ZSK4 140 aa8.74□□□□□ -1.01
R3HDM1-213ENST00000463230 GATD1Q8NB37 220 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms