RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 SLIT3O75094 1523 aa3.48□□□□□ -1.85
SGCE-209ENST00000462731 PTPRDP23468 1912 aa3.48□□□□□ -1.85
SGCE-209ENST00000462731 PEAK1Q9H792 1746 aa3.47□□□□□ -1.85
SGCE-209ENST00000462731 UNC13BO14795 1591 aa3.47□□□□□ -1.85
SGCE-209ENST00000462731 A0A0G2JQZ4 141 aa3.47□□□□□ -1.85
SGCE-209ENST00000462731 SMIM11AP58511 58 aa3.47□□□□□ -1.85
SGCE-209ENST00000462731 KLKP1Q107X0 134 aa3.47□□□□□ -1.85
SGCE-209ENST00000462731 C10orf128Q5T292 105 aa3.47□□□□□ -1.85
SGCE-209ENST00000462731 HEPN1Q6WQI6 88 aa3.47□□□□□ -1.85
SGCE-209ENST00000462731 VMO1Q7Z5L0 202 aa3.47□□□□□ -1.85
SGCE-209ENST00000462731 LIMD2Q9BT23 127 aa3.47□□□□□ -1.85
SGCE-209ENST00000462731 SUPT6HQ7KZ85 1726 aaKnown RBP3.47□□□□□ -1.85
SGCE-209ENST00000462731 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.46□□□□□ -1.86
SGCE-209ENST00000462731 TRAV22A0A0B4J277 110 aa3.46□□□□□ -1.86
SGCE-209ENST00000462731 IGHV3-30P01768 117 aa3.46□□□□□ -1.86
SGCE-209ENST00000462731 IGHV3-30-5P0DP03 117 aa3.46□□□□□ -1.86
SGCE-209ENST00000462731 TPRXLQ17RH7 258 aa3.46□□□□□ -1.86
SGCE-209ENST00000462731 Q8N6K4 173 aa3.46□□□□□ -1.86
SGCE-209ENST00000462731 C18orf32Q8TCD1 76 aa3.46□□□□□ -1.86
SGCE-209ENST00000462731 KRTAP2-2Q9BYT5 123 aa3.46□□□□□ -1.86
SGCE-209ENST00000462731 MAP3K4Q9Y6R4 1608 aa3.45□□□□□ -1.86
SGCE-209ENST00000462731 PATJQ8NI35 1801 aa3.45□□□□□ -1.86
SGCE-209ENST00000462731 TRBV6-8A0A0A6YYG3 113 aa3.45□□□□□ -1.86
SGCE-209ENST00000462731 TEX49A0A1B0GTD5 131 aa3.45□□□□□ -1.86
SGCE-209ENST00000462731 A0A1W2PNU3 283 aaPredicted RBP3.45□□□□□ -1.86
SGCE-209ENST00000462731 H3BUT2 72 aa3.45□□□□□ -1.86
SGCE-209ENST00000462731 ACYP1P07311 99 aa3.45□□□□□ -1.86
SGCE-209ENST00000462731 KRTAP1-4P0C5Y4 121 aa3.45□□□□□ -1.86
SGCE-209ENST00000462731 Q5VV11 94 aa3.45□□□□□ -1.86
SGCE-209ENST00000462731 RGPD3A6NKT7 1758 aaPredicted RBP3.45□□□□□ -1.86
SGCE-209ENST00000462731 SEC16AO15027 2179 aa3.45□□□□□ -1.86
SGCE-209ENST00000462731 UGGT2Q9NYU1 1516 aa3.44□□□□□ -1.86
SGCE-209ENST00000462731 NESP48681 1621 aa3.44□□□□□ -1.86
SGCE-209ENST00000462731 RP1P56715 2156 aa3.44□□□□□ -1.86
SGCE-209ENST00000462731 NRXN1Q9ULB1 1477 aa3.44□□□□□ -1.86
SGCE-209ENST00000462731 A0A0G2JND7 137 aa3.44□□□□□ -1.86
SGCE-209ENST00000462731 F2Z2F3 143 aa3.44□□□□□ -1.86
SGCE-209ENST00000462731 COX6CP09669 75 aa3.44□□□□□ -1.86
SGCE-209ENST00000462731 COL16A1Q07092 1604 aaPredicted RBP3.44□□□□□ -1.86
SGCE-209ENST00000462731 MAGI3Q5TCQ9 1506 aa3.44□□□□□ -1.86
SGCE-209ENST00000462731 BLMP54132 1417 aaPredicted RBP3.44□□□□□ -1.86
SGCE-209ENST00000462731 CASP8AP2Q9UKL3 1982 aa3.43□□□□□ -1.86
SGCE-209ENST00000462731 TET3O43151 1660 aa3.43□□□□□ -1.86
SGCE-209ENST00000462731 IGKV3-7A0A075B6H7 116 aa3.43□□□□□ -1.86
SGCE-209ENST00000462731 PMCHL1Q16048 86 aa3.43□□□□□ -1.86
SGCE-209ENST00000462731 SPATA45Q537H7 98 aa3.43□□□□□ -1.86
SGCE-209ENST00000462731 BPESC1Q9GZL8 116 aa3.43□□□□□ -1.86
SGCE-209ENST00000462731 PTPN23Q9H3S7 1636 aa3.43□□□□□ -1.86
SGCE-209ENST00000462731 EEA1Q15075 1411 aa3.43□□□□□ -1.86
SGCE-209ENST00000462731 COL4A5P29400 1685 aa3.43□□□□□ -1.86
SGCE-209ENST00000462731 ADAMTS7Q9UKP4 1686 aa3.43□□□□□ -1.86
SGCE-209ENST00000462731 MICAL3Q7RTP6 2002 aa3.43□□□□□ -1.86
SGCE-209ENST00000462731 CFAP74Q9C0B2 1584 aa3.42□□□□□ -1.86
SGCE-209ENST00000462731 TANC1Q9C0D5 1861 aa3.42□□□□□ -1.86
SGCE-209ENST00000462731 IGKV2-28A0A075B6P5 120 aa3.42□□□□□ -1.86
SGCE-209ENST00000462731 SDHAF1A6NFY7 115 aa3.42□□□□□ -1.86
SGCE-209ENST00000462731 CHKB-CPT1BH3BT56 60 aa3.42□□□□□ -1.86
SGCE-209ENST00000462731 IGKV2D-28P01615 120 aa3.42□□□□□ -1.86
SGCE-209ENST00000462731 EDDM3BP56851 147 aa3.42□□□□□ -1.86
SGCE-209ENST00000462731 LINC00643Q86TS7 51 aa3.42□□□□□ -1.86
SGCE-209ENST00000462731 SPACA4Q8TDM5 124 aa3.42□□□□□ -1.86
SGCE-209ENST00000462731 TCHHQ07283 1943 aa3.42□□□□□ -1.86
SGCE-209ENST00000462731 NWD2Q9ULI1 1742 aa3.41□□□□□ -1.86
SGCE-209ENST00000462731 IQSEC2Q5JU85 1478 aa3.41□□□□□ -1.86
SGCE-209ENST00000462731 ABCC1P33527 1531 aa3.41□□□□□ -1.86
SGCE-209ENST00000462731 KCPQ6ZWJ8 1503 aa3.41□□□□□ -1.86
SGCE-209ENST00000462731 MYO18AQ92614 2054 aaKnown RBP3.41□□□□□ -1.86
SGCE-209ENST00000462731 TRBV6-4A0A1B0GX49 114 aa3.41□□□□□ -1.86
SGCE-209ENST00000462731 LRCOL1A6NCL2 159 aa3.41□□□□□ -1.86
SGCE-209ENST00000462731 TMEM14DPA8MWL7 114 aa3.41□□□□□ -1.86
SGCE-209ENST00000462731 HOXB6P17509 224 aaKnown RBP3.41□□□□□ -1.86
SGCE-209ENST00000462731 ELOF1P60002 83 aaKnown RBP3.41□□□□□ -1.86
SGCE-209ENST00000462731 CDC42SE2Q9NRR3 84 aa3.41□□□□□ -1.86
SGCE-209ENST00000462731 ABCA8O94911 1581 aa3.41□□□□□ -1.86
SGCE-209ENST00000462731 MED13Q9UHV7 2174 aa3.41□□□□□ -1.86
SGCE-209ENST00000462731 MYOFQ9NZM1 2061 aa3.4□□□□□ -1.86
SGCE-209ENST00000462731 TRBV25-1A0A075B6N4 114 aa3.4□□□□□ -1.87
SGCE-209ENST00000462731 IGLV6-57P01721 117 aa3.4□□□□□ -1.87
SGCE-209ENST00000462731 EFNA4P52798 201 aa3.4□□□□□ -1.87
SGCE-209ENST00000462731 ZNF56Q15929 161 aa3.4□□□□□ -1.87
SGCE-209ENST00000462731 CFAP126Q5VTH2 177 aa3.4□□□□□ -1.87
SGCE-209ENST00000462731 CLTCQ00610 1675 aaKnown RBP3.39□□□□□ -1.87
SGCE-209ENST00000462731 CLPSL1A2RUU4 121 aa3.39□□□□□ -1.87
SGCE-209ENST00000462731 PDE6GP18545 87 aa3.39□□□□□ -1.87
SGCE-209ENST00000462731 KRTAP13-2Q52LG2 175 aa3.39□□□□□ -1.87
SGCE-209ENST00000462731 FAM223AQ8IWN6 122 aa3.39□□□□□ -1.87
SGCE-209ENST00000462731 DYNLRB1Q9NP97 96 aa3.39□□□□□ -1.87
SGCE-209ENST00000462731 LTBP2Q14767 1821 aa3.39□□□□□ -1.87
SGCE-209ENST00000462731 KIAA0100Q14667 2235 aaKnown RBP3.39□□□□□ -1.87
SGCE-209ENST00000462731 ABCC2Q92887 1545 aa3.39□□□□□ -1.87
SGCE-209ENST00000462731 NUMA1Q14980 2115 aa3.38□□□□□ -1.87
SGCE-209ENST00000462731 MED12LQ86YW9 2145 aa3.38□□□□□ -1.87
SGCE-209ENST00000462731 LOC285095A0A1B0GVY8 99 aa3.38□□□□□ -1.87
SGCE-209ENST00000462731 HIGD1CA8MV81 97 aa3.38□□□□□ -1.87
SGCE-209ENST00000462731 LENEPQ9Y5L5 61 aa3.38□□□□□ -1.87
SGCE-209ENST00000462731 COL4A6Q14031 1691 aa3.38□□□□□ -1.87
SGCE-209ENST00000462731 MYO3AQ8NEV4 1616 aa3.37□□□□□ -1.87
SGCE-209ENST00000462731 MPDZO75970 2070 aa3.37□□□□□ -1.87
SGCE-209ENST00000462731 HFM1A2PYH4 1435 aa3.37□□□□□ -1.87
SGCE-209ENST00000462731 LOC101927531A0A1B0GV80 90 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms