RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 TRBV10-3A0A0K0K1G6 114 aa0.51□□□□□ -2.33
VCL-203ENST00000461383 APOC4-APOC2K7ER74 178 aa0.51□□□□□ -2.33
VCL-203ENST00000461383 PRH1P02810 166 aa0.51□□□□□ -2.33
VCL-203ENST00000461383 PI4KAP42356 2102 aa0.51□□□□□ -2.33
VCL-203ENST00000461383 UBE2D1P51668 147 aa0.51□□□□□ -2.33
VCL-203ENST00000461383 SPINK6Q6UWN8 80 aa0.51□□□□□ -2.33
VCL-203ENST00000461383 ZNF818PQ6ZRF7 136 aa0.51□□□□□ -2.33
VCL-203ENST00000461383 IBTKQ9P2D0 1353 aaPredicted RBP0.51□□□□□ -2.33
VCL-203ENST00000461383 CACNA1HO95180 2353 aa0.5□□□□□ -2.33
VCL-203ENST00000461383 DOCK2Q92608 1830 aa0.5□□□□□ -2.33
VCL-203ENST00000461383 KDM6BO15054 1643 aa0.5□□□□□ -2.33
VCL-203ENST00000461383 LAMC3Q9Y6N6 1575 aa0.5□□□□□ -2.33
VCL-203ENST00000461383 ZNF518AQ6AHZ1 1483 aa0.5□□□□□ -2.33
VCL-203ENST00000461383 GVQW2A0A096LPI5 108 aaPredicted RBP0.5□□□□□ -2.33
VCL-203ENST00000461383 TRGV1A0A0A0MS02 117 aa0.5□□□□□ -2.33
VCL-203ENST00000461383 SARNPP82979 210 aaKnown RBP0.5□□□□□ -2.33
VCL-203ENST00000461383 SMR3AQ99954 134 aa0.5□□□□□ -2.33
VCL-203ENST00000461383 PROK2Q9HC23 129 aa0.5□□□□□ -2.33
VCL-203ENST00000461383 NAV2Q8IVL1 2488 aa0.5□□□□□ -2.33
VCL-203ENST00000461383 FOCADQ5VW36 1801 aa0.5□□□□□ -2.33
VCL-203ENST00000461383 TMEM14DPA8MWL7 114 aa0.49□□□□□ -2.33
VCL-203ENST00000461383 GCHFRP30047 84 aa0.49□□□□□ -2.33
VCL-203ENST00000461383 Q96NJ1 140 aa0.49□□□□□ -2.33
VCL-203ENST00000461383 AGPAT4-IT1Q9H0P7 198 aa0.49□□□□□ -2.33
VCL-203ENST00000461383 NAIPQ13075 1403 aa0.48□□□□□ -2.33
VCL-203ENST00000461383 SIPA1L3O60292 1781 aaPredicted RBP0.48□□□□□ -2.33
VCL-203ENST00000461383 PHLPP1O60346 1717 aa0.48□□□□□ -2.33
VCL-203ENST00000461383 CCL8P80075 99 aa0.48□□□□□ -2.33
VCL-203ENST00000461383 RBM3P98179 157 aaKnown RBP0.48□□□□□ -2.33
VCL-203ENST00000461383 MEIG1Q5JSS6 88 aa0.48□□□□□ -2.33
VCL-203ENST00000461383 Q6ZRX8 168 aa0.48□□□□□ -2.33
VCL-203ENST00000461383 RERGLQ9H628 205 aa0.48□□□□□ -2.33
VCL-203ENST00000461383 NAA60Q9H7X0 242 aa0.48□□□□□ -2.33
VCL-203ENST00000461383 LINC00312Q9Y6C7 94 aa0.48□□□□□ -2.33
VCL-203ENST00000461383 MUC5BQ9HC84 5762 aaPredicted RBP0.48□□□□□ -2.33
VCL-203ENST00000461383 PTPRZ1P23471 2315 aaPredicted RBP0.48□□□□□ -2.33
VCL-203ENST00000461383 PATJQ8NI35 1801 aa0.48□□□□□ -2.33
VCL-203ENST00000461383 TCHHQ07283 1943 aa0.47□□□□□ -2.33
VCL-203ENST00000461383 K7EP13 123 aa0.47□□□□□ -2.33
VCL-203ENST00000461383 NMBP08949 121 aa0.47□□□□□ -2.33
VCL-203ENST00000461383 INSL4Q14641 139 aa0.47□□□□□ -2.33
VCL-203ENST00000461383 C12orf73Q69YU5 71 aa0.47□□□□□ -2.33
VCL-203ENST00000461383 C1orf54Q8WWF1 131 aa0.47□□□□□ -2.33
VCL-203ENST00000461383 AQP10Q96PS8 301 aa0.47□□□□□ -2.33
VCL-203ENST00000461383 SNRNP25Q9BV90 132 aaKnown RBP0.47□□□□□ -2.33
VCL-203ENST00000461383 SERP1Q9Y6X1 66 aa0.47□□□□□ -2.33
VCL-203ENST00000461383 CFTRP13569 1480 aa0.47□□□□□ -2.33
VCL-203ENST00000461383 TRAV13-2A0A0B4J235 113 aa0.46□□□□□ -2.34
VCL-203ENST00000461383 TRAV1-2A0A0B4J238 106 aa0.46□□□□□ -2.34
VCL-203ENST00000461383 COX6A2Q02221 97 aa0.46□□□□□ -2.34
VCL-203ENST00000461383 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.46□□□□□ -2.34
VCL-203ENST00000461383 WFDC6Q9BQY6 131 aa0.46□□□□□ -2.34
VCL-203ENST00000461383 TTC28Q96AY4 2481 aa0.46□□□□□ -2.34
VCL-203ENST00000461383 IFT140Q96RY7 1462 aa0.46□□□□□ -2.34
VCL-203ENST00000461383 F8P00451 2351 aa0.46□□□□□ -2.34
VCL-203ENST00000461383 TPRP12270 2363 aaKnown RBP0.46□□□□□ -2.34
VCL-203ENST00000461383 DOCK1Q14185 1865 aa0.46□□□□□ -2.34
VCL-203ENST00000461383 LRRC37A3O60309 1634 aa0.46□□□□□ -2.34
VCL-203ENST00000461383 CACNA1CQ13936 2221 aa0.45□□□□□ -2.34
VCL-203ENST00000461383 CLPSL1A2RUU4 121 aa0.45□□□□□ -2.34
VCL-203ENST00000461383 HCG22E2RYF7 251 aa0.45□□□□□ -2.34
VCL-203ENST00000461383 SIX6O95475 246 aa0.45□□□□□ -2.34
VCL-203ENST00000461383 C10orf128Q5T292 105 aa0.45□□□□□ -2.34
VCL-203ENST00000461383 BAGE3Q86Y29 109 aa0.45□□□□□ -2.34
VCL-203ENST00000461383 AHCTF1Q8WYP5 2266 aa0.45□□□□□ -2.34
VCL-203ENST00000461383 CASKIN1Q8WXD9 1431 aa0.45□□□□□ -2.34
VCL-203ENST00000461383 BDP1A6H8Y1 2624 aa0.45□□□□□ -2.34
VCL-203ENST00000461383 SSC5DA1L4H1 1573 aa0.45□□□□□ -2.34
VCL-203ENST00000461383 UNC13BO14795 1591 aa0.45□□□□□ -2.34
VCL-203ENST00000461383 ARAP2Q8WZ64 1704 aa0.44□□□□□ -2.34
VCL-203ENST00000461383 IGF2RP11717 2491 aa0.44□□□□□ -2.34
VCL-203ENST00000461383 MEGF8Q7Z7M0 2845 aa0.44□□□□□ -2.34
VCL-203ENST00000461383 MIF4GDA9UHW6 222 aaKnown RBP0.44□□□□□ -2.34
VCL-203ENST00000461383 PPP1R17O96001 155 aa0.44□□□□□ -2.34
VCL-203ENST00000461383 KRTAP21-1Q3LI58 79 aa0.44□□□□□ -2.34
VCL-203ENST00000461383 Q56UQ5 140 aa0.44□□□□□ -2.34
VCL-203ENST00000461383 Q6AWC8 147 aa0.44□□□□□ -2.34
VCL-203ENST00000461383 RPL13AP3Q6NVV1 102 aa0.44□□□□□ -2.34
VCL-203ENST00000461383 R4GMQ9 66 aa0.44□□□□□ -2.34
VCL-203ENST00000461383 IFT172Q9UG01 1749 aa0.44□□□□□ -2.34
VCL-203ENST00000461383 EFCAB10A6NFE3 127 aa0.43□□□□□ -2.34
VCL-203ENST00000461383 KRTAP2-3P0C7H8 128 aa0.43□□□□□ -2.34
VCL-203ENST00000461383 FGF7P21781 194 aa0.43□□□□□ -2.34
VCL-203ENST00000461383 UBE2DNLQ8IWF7 75 aa0.43□□□□□ -2.34
VCL-203ENST00000461383 LSM10Q969L4 123 aaKnown RBP0.43□□□□□ -2.34
VCL-203ENST00000461383 PPP3R2Q96LZ3 170 aa0.43□□□□□ -2.34
VCL-203ENST00000461383 KRTAP2-4Q9BYR9 128 aa0.43□□□□□ -2.34
VCL-203ENST00000461383 KRTAP2-1Q9BYU5 128 aa0.43□□□□□ -2.34
VCL-203ENST00000461383 NPVFQ9HCQ7 196 aa0.43□□□□□ -2.34
VCL-203ENST00000461383 PRDM2Q13029 1718 aa0.43□□□□□ -2.34
VCL-203ENST00000461383 ABCA12Q86UK0 2595 aa0.42□□□□□ -2.34
VCL-203ENST00000461383 APOC2P02655 101 aa0.42□□□□□ -2.34
VCL-203ENST00000461383 AKAIN1P0CW23 69 aa0.42□□□□□ -2.34
VCL-203ENST00000461383 BTG2P78543 158 aa0.42□□□□□ -2.34
VCL-203ENST00000461383 TTC9CQ8N5M4 171 aa0.42□□□□□ -2.34
VCL-203ENST00000461383 Q8N8P6 123 aa0.42□□□□□ -2.34
VCL-203ENST00000461383 IFNGP01579 166 aa0.41□□□□□ -2.34
VCL-203ENST00000461383 FAM213BQ8TBF2 198 aa0.41□□□□□ -2.34
VCL-203ENST00000461383 ROCK2O75116 1388 aaKnown RBP0.41□□□□□ -2.34
VCL-203ENST00000461383 ASXL3Q9C0F0 2248 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms