RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 CTRLP40313 264 aa15.08■□□□□ 0
TRAF4-207ENST00000461195 WDR73Q6P4I2 378 aa15.08■□□□□ 0
TRAF4-207ENST00000461195 NIT1Q86X76 327 aa15.08■□□□□ 0
TRAF4-207ENST00000461195 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.08■□□□□ 0
TRAF4-207ENST00000461195 PGPEP1Q9NXJ5 209 aa15.08■□□□□ 0
TRAF4-207ENST00000461195 NTF3P20783 257 aa15.07■□□□□ 0
TRAF4-207ENST00000461195 DAZ4Q86SG3 579 aaKnown RBP15.07■□□□□ 0
TRAF4-207ENST00000461195 DAZ3Q9NR90 486 aaKnown RBP15.07■□□□□ 0
TRAF4-207ENST00000461195 SMIM7Q9BQ49 75 aa15.06■□□□□ 0
TRAF4-207ENST00000461195 TRBV6-8A0A0A6YYG3 113 aa15.05■□□□□ -0
TRAF4-207ENST00000461195 H7C1H1 209 aa15.05■□□□□ -0
TRAF4-207ENST00000461195 GATCO43716 136 aaKnown RBP15.05■□□□□ -0
TRAF4-207ENST00000461195 FAM231DQ6ZW35 169 aa15.05■□□□□ -0
TRAF4-207ENST00000461195 CNFNQ9BYD5 112 aa15.05■□□□□ -0
TRAF4-207ENST00000461195 A0A087WX48 190 aa15.04■□□□□ -0
TRAF4-207ENST00000461195 TRAV8-3A0A0A6YYJ7 113 aa15.04■□□□□ -0
TRAF4-207ENST00000461195 M0QY20 66 aa15.04■□□□□ -0
TRAF4-207ENST00000461195 SRP19P09132 144 aaKnown RBP15.04■□□□□ -0
TRAF4-207ENST00000461195 SUMO4Q6EEV6 95 aa15.04■□□□□ -0
TRAF4-207ENST00000461195 CDPF1Q6NVV7 123 aa15.04■□□□□ -0
TRAF4-207ENST00000461195 KCNIP4Q6PIL6 250 aa15.04■□□□□ -0
TRAF4-207ENST00000461195 TEX261Q6UWH6 196 aa15.04■□□□□ -0
TRAF4-207ENST00000461195 CHCHD7Q9BUK0 85 aa15.04■□□□□ -0
TRAF4-207ENST00000461195 TM2D2Q9BX73 214 aa15.04■□□□□ -0
TRAF4-207ENST00000461195 DPH3P1Q9H4G8 78 aa15.04■□□□□ -0
TRAF4-207ENST00000461195 LRP1BQ9NZR2 4599 aa15.04■□□□□ -0
TRAF4-207ENST00000461195 HSPG2P98160 4391 aa15.03■□□□□ -0
TRAF4-207ENST00000461195 ZNF727A8MUV8 499 aa15.03■□□□□ -0
TRAF4-207ENST00000461195 CDK2AP2O75956 126 aa15.03■□□□□ -0
TRAF4-207ENST00000461195 TWIST1Q15672 202 aa15.03■□□□□ -0
TRAF4-207ENST00000461195 TMEM97Q5BJF2 176 aa15.03■□□□□ -0
TRAF4-207ENST00000461195 DNAJC30Q96LL9 226 aa15.03■□□□□ -0
TRAF4-207ENST00000461195 LRCOL1A6NCL2 159 aa15.02■□□□□ -0
TRAF4-207ENST00000461195 GTSF1Q8WW33 167 aa15.02■□□□□ -0
TRAF4-207ENST00000461195 A8MWL6 223 aa15.01□□□□□ -0.01
TRAF4-207ENST00000461195 FUSP35637 526 aaKnown RBP eCLIP15.01□□□□□ -0.01
TRAF4-207ENST00000461195 ELOBQ15370 118 aa15.01□□□□□ -0.01
TRAF4-207ENST00000461195 LINC01551Q86U37 167 aa15.01□□□□□ -0.01
TRAF4-207ENST00000461195 DNAH5Q8TE73 4624 aa15.01□□□□□ -0.01
TRAF4-207ENST00000461195 TMEM262E9PQX1 116 aa15□□□□□ -0.01
TRAF4-207ENST00000461195 CT83Q5H943 113 aa15□□□□□ -0.01
TRAF4-207ENST00000461195 RASL11AQ6T310 242 aa15□□□□□ -0.01
TRAF4-207ENST00000461195 KLK12Q9UKR0 248 aa15□□□□□ -0.01
TRAF4-207ENST00000461195 PKIAP61925 76 aa14.98□□□□□ -0.01
TRAF4-207ENST00000461195 NTM-AS1Q6ZSK4 140 aa14.98□□□□□ -0.01
TRAF4-207ENST00000461195 RMI2Q96E14 147 aa14.98□□□□□ -0.01
TRAF4-207ENST00000461195 CHCHD5Q9BSY4 110 aa14.98□□□□□ -0.01
TRAF4-207ENST00000461195 FAM74A3Q4VXF1 159 aa14.97□□□□□ -0.01
TRAF4-207ENST00000461195 SMIM15Q7Z3B0 74 aa14.97□□□□□ -0.01
TRAF4-207ENST00000461195 PGLYRP4Q96LB8 373 aa14.97□□□□□ -0.01
TRAF4-207ENST00000461195 NIT2Q9NQR4 276 aa14.97□□□□□ -0.01
TRAF4-207ENST00000461195 COX11Q9Y6N1 276 aa14.97□□□□□ -0.01
TRAF4-207ENST00000461195 FOXA3P55318 350 aaPredicted RBP14.96□□□□□ -0.01
TRAF4-207ENST00000461195 OSTCQ9NRP0 149 aa14.96□□□□□ -0.01
TRAF4-207ENST00000461195 TRBV25-1A0A075B6N4 114 aa14.95□□□□□ -0.02
TRAF4-207ENST00000461195 PEA15Q15121 130 aa14.95□□□□□ -0.02
TRAF4-207ENST00000461195 MPV17L2Q567V2 206 aa14.95□□□□□ -0.02
TRAF4-207ENST00000461195 Q8N814 137 aa14.95□□□□□ -0.02
TRAF4-207ENST00000461195 UBE2WQ96B02 151 aa14.95□□□□□ -0.02
TRAF4-207ENST00000461195 TMEM241Q24JQ0 296 aa14.94□□□□□ -0.02
TRAF4-207ENST00000461195 NTN5Q8WTR8 489 aaPredicted RBP14.94□□□□□ -0.02
TRAF4-207ENST00000461195 TSKUQ8WUA8 353 aa14.94□□□□□ -0.02
TRAF4-207ENST00000461195 BORCS7Q96B45 105 aa14.94□□□□□ -0.02
TRAF4-207ENST00000461195 IGKV2D-24A0A075B6R9 120 aa14.93□□□□□ -0.02
TRAF4-207ENST00000461195 IGHV1-24A0A0C4DH33 117 aa14.93□□□□□ -0.02
TRAF4-207ENST00000461195 C9JQL5 133 aa14.93□□□□□ -0.02
TRAF4-207ENST00000461195 Q0VG73 95 aa14.93□□□□□ -0.02
TRAF4-207ENST00000461195 IQCJQ1A5X6 159 aa14.93□□□□□ -0.02
TRAF4-207ENST00000461195 C15orf54Q8N8G6 183 aa14.93□□□□□ -0.02
TRAF4-207ENST00000461195 FRZBQ92765 325 aa14.93□□□□□ -0.02
TRAF4-207ENST00000461195 GFRA4Q9GZZ7 299 aa14.93□□□□□ -0.02
TRAF4-207ENST00000461195 SMDT1Q9H4I9 107 aa14.93□□□□□ -0.02
TRAF4-207ENST00000461195 GATD1Q8NB37 220 aa14.92□□□□□ -0.02
TRAF4-207ENST00000461195 IGLV5-52A0A0A0MRZ9 124 aa14.91□□□□□ -0.02
TRAF4-207ENST00000461195 FAM231BA6NCW3 169 aa14.91□□□□□ -0.02
TRAF4-207ENST00000461195 HIGD1CA8MV81 97 aa14.91□□□□□ -0.02
TRAF4-207ENST00000461195 ANGP03950 147 aaKnown RBP14.91□□□□□ -0.02
TRAF4-207ENST00000461195 GCSHP23434 173 aa14.91□□□□□ -0.02
TRAF4-207ENST00000461195 SRSF3P84103 164 aaKnown RBP14.91□□□□□ -0.02
TRAF4-207ENST00000461195 GAGE6Q13070 117 aa14.91□□□□□ -0.02
TRAF4-207ENST00000461195 ATRAIDQ6UW56 229 aa14.91□□□□□ -0.02
TRAF4-207ENST00000461195 MAPKAPK5-AS1Q8N8E1 139 aa14.91□□□□□ -0.02
TRAF4-207ENST00000461195 ISOC2Q96AB3 205 aa14.91□□□□□ -0.02
TRAF4-207ENST00000461195 APOBP04114 4563 aaKnown RBP14.9□□□□□ -0.02
TRAF4-207ENST00000461195 TRAV26-2A0A0B4J265 109 aa14.9□□□□□ -0.02
TRAF4-207ENST00000461195 CRPP02741 224 aa14.9□□□□□ -0.02
TRAF4-207ENST00000461195 RPL23P62829 140 aaKnown RBP14.9□□□□□ -0.02
TRAF4-207ENST00000461195 WFDC2Q14508 124 aa14.9□□□□□ -0.02
TRAF4-207ENST00000461195 Q8N976 141 aa14.9□□□□□ -0.02
TRAF4-207ENST00000461195 NAT8Q9UHE5 227 aa14.9□□□□□ -0.02
TRAF4-207ENST00000461195 A0A1B0GUT8 65 aa14.89□□□□□ -0.03
TRAF4-207ENST00000461195 KRTAP10-1P60331 282 aa14.89□□□□□ -0.03
TRAF4-207ENST00000461195 ADIRFQ15847 76 aa14.89□□□□□ -0.03
TRAF4-207ENST00000461195 ENHOQ6UWT2 76 aa14.89□□□□□ -0.03
TRAF4-207ENST00000461195 V9GYV3 84 aa14.89□□□□□ -0.03
TRAF4-207ENST00000461195 LECT2O14960 151 aa14.88□□□□□ -0.03
TRAF4-207ENST00000461195 RBX1P62877 108 aa14.88□□□□□ -0.03
TRAF4-207ENST00000461195 BAALCQ8WXS3 180 aa14.88□□□□□ -0.03
TRAF4-207ENST00000461195 TMEM243Q9BU79 118 aa14.88□□□□□ -0.03
TRAF4-207ENST00000461195 COTL1Q14019 142 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms