RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 H3BSH0 61 aa1.35□□□□□ -2.19
LINC02540-201ENST00000455554 J3QT63 122 aa1.35□□□□□ -2.19
LINC02540-201ENST00000455554 XCL1P47992 114 aa1.35□□□□□ -2.19
LINC02540-201ENST00000455554 UBE2AP49459 152 aa1.35□□□□□ -2.19
LINC02540-201ENST00000455554 ATP5EP56381 51 aaPredicted RBP1.35□□□□□ -2.19
LINC02540-201ENST00000455554 ADIGQ0VDE8 80 aa1.35□□□□□ -2.19
LINC02540-201ENST00000455554 MYO7BQ6PIF6 2116 aa1.35□□□□□ -2.19
LINC02540-201ENST00000455554 SFTA2Q6UW10 78 aa1.35□□□□□ -2.19
LINC02540-201ENST00000455554 LYPD5Q6UWN5 251 aa1.35□□□□□ -2.19
LINC02540-201ENST00000455554 C2orf82Q6UX34 121 aa1.35□□□□□ -2.19
LINC02540-201ENST00000455554 FAM223AQ8IWN6 122 aa1.35□□□□□ -2.19
LINC02540-201ENST00000455554 TMEM75Q8N9X5 138 aa1.35□□□□□ -2.19
LINC02540-201ENST00000455554 SMCR5Q8TEV8 140 aa1.35□□□□□ -2.19
LINC02540-201ENST00000455554 CCL17Q92583 94 aa1.35□□□□□ -2.19
LINC02540-201ENST00000455554 ZNF714Q96N38 554 aa1.35□□□□□ -2.19
LINC02540-201ENST00000455554 NABP2Q9BQ15 211 aa1.35□□□□□ -2.19
LINC02540-201ENST00000455554 SLC50A1Q9BRV3 221 aa1.35□□□□□ -2.19
LINC02540-201ENST00000455554 TTTY13Q9BZ97 58 aa1.35□□□□□ -2.19
LINC02540-201ENST00000455554 DYNLRB1Q9NP97 96 aa1.35□□□□□ -2.19
LINC02540-201ENST00000455554 PRO1854Q9UHT4 67 aa1.35□□□□□ -2.19
LINC02540-201ENST00000455554 LINC00588Q9Y4M8 146 aa1.35□□□□□ -2.19
LINC02540-201ENST00000455554 EML5Q05BV3 1969 aa1.35□□□□□ -2.19
LINC02540-201ENST00000455554 NHSQ6T4R5 1651 aa1.35□□□□□ -2.19
LINC02540-201ENST00000455554 MYOFQ9NZM1 2061 aa1.35□□□□□ -2.19
LINC02540-201ENST00000455554 HEATR5BQ9P2D3 2071 aa1.35□□□□□ -2.19
LINC02540-201ENST00000455554 IGLV11-55A0A075B6I3 123 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 IGKV1-27A0A075B6S5 117 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 IGHV1OR15-9A0A0B4J2B8 117 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 IGHV5-51A0A0C4DH38 117 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 IGHV3-66A0A0C4DH42 116 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 LINC01546A6NGU7 62 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 HIGD1CA8MV81 97 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 H7BZZ5 65 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 TMEM256-PLSCR3K7ERE1 68 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 UBE2L6O14933 153 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 ZNF73O43830 326 aaPredicted RBP1.34□□□□□ -2.19
LINC02540-201ENST00000455554 BCE1O60756 84 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 IGLV1-47P01700 117 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 TRBV12-3P01733 135 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 IGHV3-33P01772 117 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 PIRTP0C851 137 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 ARL14EPLP0DKL9 152 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 IAPPP10997 89 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 IFI27P40305 119 aaPredicted RBP1.34□□□□□ -2.19
LINC02540-201ENST00000455554 ZNF80P51504 273 aaPredicted RBP1.34□□□□□ -2.19
LINC02540-201ENST00000455554 FXYD4P59646 89 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 RBM3P98179 157 aaKnown RBP1.34□□□□□ -2.19
LINC02540-201ENST00000455554 TFF3Q07654 80 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 CIRBPQ14011 172 aaKnown RBP1.34□□□□□ -2.19
LINC02540-201ENST00000455554 C6orf99Q4VX62 202 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 SPANXN5Q5MJ07 72 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 FAM222AQ5U5X8 452 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 Q6JHZ5 121 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 C16orf47Q6ZP98 133 aaPredicted RBP1.34□□□□□ -2.19
LINC02540-201ENST00000455554 LCA10Q71F78 164 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 PHF5AQ7RTV0 110 aaKnown RBP1.34□□□□□ -2.19
LINC02540-201ENST00000455554 VN1R4Q7Z5H5 301 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 MKXQ8IYA7 352 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 DAND5Q8N907 189 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 WFDC5Q8TCV5 224 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 FXYD5Q96DB9 178 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 NPCDR1Q9BY65 106 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 ZNF355PQ9NSJ1 428 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 TAC3Q9UHF0 121 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 TIMM8BQ9Y5J9 83 aaPredicted RBP1.34□□□□□ -2.19
LINC02540-201ENST00000455554 R4GMQ9 66 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 U3KQK5 164 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 ZNF831Q5JPB2 1677 aa1.34□□□□□ -2.19
LINC02540-201ENST00000455554 PCNX2A6NKB5 2137 aa1.34□□□□□ -2.2
LINC02540-201ENST00000455554 FREM3P0C091 2139 aa1.34□□□□□ -2.2
LINC02540-201ENST00000455554 PLXNA2O75051 1894 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 ALPK2Q86TB3 2170 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 MED12Q93074 2177 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 IGKV1D-43A0A0B4J1Z2 117 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 TRAV13-2A0A0B4J235 113 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 TRAV3A0A0B4J244 114 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 IGHV3-64DA0A0J9YX35 117 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 TRBV30A0A0K0K1B3 111 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 A0A1B0GVX0 72 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 TMEM30CPA0ZSE6 113 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 A8MUN3 132 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 C4orf51C9J302 202 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 LST1O00453 97 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 PSPHP1O15172 72 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 NDUFC1O43677 76 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 ZNF861PO60384 105 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 HMGN2P05204 90 aaKnown RBP1.33□□□□□ -2.2
LINC02540-201ENST00000455554 TLX1NBP0CAT3 122 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 INAFM2P0DMQ5 153 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 CD24P25063 80 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 CKS2P33552 79 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 ZNF137PP52743 207 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 EDDM3BP56851 147 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 KLKP1Q107X0 134 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 RHOHQ15669 191 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 GUSBP11Q6P575 273 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 ZNF818PQ6ZRF7 136 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 FAM19A3Q7Z5A8 133 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 C20orf197Q8N268 126 aa1.33□□□□□ -2.2
LINC02540-201ENST00000455554 SLC25A29Q8N8R3 303 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms