RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 UBE2D3P61077 147 aa11.72□□□□□ -0.53
FAM3A-216ENST00000449971 UBE2D2P62837 147 aa11.72□□□□□ -0.53
FAM3A-216ENST00000449971 DAZ4Q86SG3 579 aaKnown RBP11.72□□□□□ -0.53
FAM3A-216ENST00000449971 DAZ3Q9NR90 486 aaKnown RBP11.72□□□□□ -0.53
FAM3A-216ENST00000449971 URGCP-MRPS24S4R325 110 aa11.72□□□□□ -0.53
FAM3A-216ENST00000449971 IGLC6P0CF74 106 aa11.71□□□□□ -0.53
FAM3A-216ENST00000449971 NEXN-AS1Q8NBZ9 246 aa11.71□□□□□ -0.53
FAM3A-216ENST00000449971 OR10G8Q8NGN5 311 aa11.71□□□□□ -0.53
FAM3A-216ENST00000449971 AP1S3Q96PC3 154 aa11.71□□□□□ -0.53
FAM3A-216ENST00000449971 GCSHP23434 173 aa11.7□□□□□ -0.54
FAM3A-216ENST00000449971 CACNG7P62955 275 aa11.7□□□□□ -0.54
FAM3A-216ENST00000449971 LAGE3Q14657 143 aa11.7□□□□□ -0.54
FAM3A-216ENST00000449971 NUDT10Q8NFP7 164 aa11.7□□□□□ -0.54
FAM3A-216ENST00000449971 NUDT11Q96G61 164 aa11.7□□□□□ -0.54
FAM3A-216ENST00000449971 KIF25-AS1Q9Y6Z4 181 aa11.7□□□□□ -0.54
FAM3A-216ENST00000449971 F2Z2F3 143 aa11.69□□□□□ -0.54
FAM3A-216ENST00000449971 TOR2AQ5JU69 321 aa11.69□□□□□ -0.54
FAM3A-216ENST00000449971 NIT1Q86X76 327 aa11.69□□□□□ -0.54
FAM3A-216ENST00000449971 OCC1Q8TAD7 63 aa11.69□□□□□ -0.54
FAM3A-216ENST00000449971 TM2D2Q9BX73 214 aa11.69□□□□□ -0.54
FAM3A-216ENST00000449971 A0A087WX48 190 aa11.68□□□□□ -0.54
FAM3A-216ENST00000449971 TRAV8-3A0A0A6YYJ7 113 aa11.68□□□□□ -0.54
FAM3A-216ENST00000449971 LRCOL1A6NCL2 159 aa11.68□□□□□ -0.54
FAM3A-216ENST00000449971 MGPP08493 103 aa11.68□□□□□ -0.54
FAM3A-216ENST00000449971 KCNIP4Q6PIL6 250 aa11.68□□□□□ -0.54
FAM3A-216ENST00000449971 LYZL1Q6UWQ5 148 aa11.68□□□□□ -0.54
FAM3A-216ENST00000449971 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.68□□□□□ -0.54
FAM3A-216ENST00000449971 TMEM262E9PQX1 116 aa11.67□□□□□ -0.54
FAM3A-216ENST00000449971 TMEM250H0YL14 139 aa11.67□□□□□ -0.54
FAM3A-216ENST00000449971 CEBPGP53567 150 aa11.67□□□□□ -0.54
FAM3A-216ENST00000449971 LYPD6BQ8NI32 183 aa11.67□□□□□ -0.54
FAM3A-216ENST00000449971 RNASE7Q9H1E1 156 aaKnown RBP11.67□□□□□ -0.54
FAM3A-216ENST00000449971 TRBV6-8A0A0A6YYG3 113 aa11.66□□□□□ -0.54
FAM3A-216ENST00000449971 K7EN84 100 aa11.66□□□□□ -0.54
FAM3A-216ENST00000449971 EIF5A2Q9GZV4 153 aaKnown RBP11.66□□□□□ -0.54
FAM3A-216ENST00000449971 RPP21Q9H633 154 aaKnown RBP11.66□□□□□ -0.54
FAM3A-216ENST00000449971 KLK12Q9UKR0 248 aa11.66□□□□□ -0.54
FAM3A-216ENST00000449971 NTF3P20783 257 aa11.65□□□□□ -0.54
FAM3A-216ENST00000449971 TRGC1P0CF51 173 aa11.64□□□□□ -0.55
FAM3A-216ENST00000449971 ELOBQ15370 118 aa11.64□□□□□ -0.55
FAM3A-216ENST00000449971 CHCHD7Q9BUK0 85 aa11.64□□□□□ -0.55
FAM3A-216ENST00000449971 IGLV5-52A0A0A0MRZ9 124 aa11.63□□□□□ -0.55
FAM3A-216ENST00000449971 H7C1H1 209 aa11.63□□□□□ -0.55
FAM3A-216ENST00000449971 M0QY20 66 aa11.63□□□□□ -0.55
FAM3A-216ENST00000449971 SUMO4Q6EEV6 95 aa11.63□□□□□ -0.55
FAM3A-216ENST00000449971 WDR73Q6P4I2 378 aa11.63□□□□□ -0.55
FAM3A-216ENST00000449971 Q8N814 137 aa11.63□□□□□ -0.55
FAM3A-216ENST00000449971 UBE2WQ96B02 151 aa11.63□□□□□ -0.55
FAM3A-216ENST00000449971 RMI2Q96E14 147 aa11.63□□□□□ -0.55
FAM3A-216ENST00000449971 CHCHD5Q9BSY4 110 aa11.63□□□□□ -0.55
FAM3A-216ENST00000449971 GATCO43716 136 aaKnown RBP11.62□□□□□ -0.55
FAM3A-216ENST00000449971 TWIST1Q15672 202 aa11.62□□□□□ -0.55
FAM3A-216ENST00000449971 TMEM97Q5BJF2 176 aa11.62□□□□□ -0.55
FAM3A-216ENST00000449971 NTN5Q8WTR8 489 aaPredicted RBP11.62□□□□□ -0.55
FAM3A-216ENST00000449971 DNAJC30Q96LL9 226 aa11.62□□□□□ -0.55
FAM3A-216ENST00000449971 DPH3P1Q9H4G8 78 aa11.62□□□□□ -0.55
FAM3A-216ENST00000449971 COX11Q9Y6N1 276 aa11.62□□□□□ -0.55
FAM3A-216ENST00000449971 IGKV2D-24A0A075B6R9 120 aa11.61□□□□□ -0.55
FAM3A-216ENST00000449971 LECT2O14960 151 aa11.61□□□□□ -0.55
FAM3A-216ENST00000449971 CTRLP40313 264 aa11.61□□□□□ -0.55
FAM3A-216ENST00000449971 NTM-AS1Q6ZSK4 140 aa11.61□□□□□ -0.55
FAM3A-216ENST00000449971 WFDC2Q14508 124 aa11.6□□□□□ -0.55
FAM3A-216ENST00000449971 RASL11AQ6T310 242 aa11.6□□□□□ -0.55
FAM3A-216ENST00000449971 BAALCQ8WXS3 180 aa11.6□□□□□ -0.55
FAM3A-216ENST00000449971 FAM210AQ96ND0 272 aa11.6□□□□□ -0.55
FAM3A-216ENST00000449971 UBR4Q5T4S7 5183 aa11.6□□□□□ -0.55
FAM3A-216ENST00000449971 PKIAP61925 76 aa11.59□□□□□ -0.55
FAM3A-216ENST00000449971 MPV17L2Q567V2 206 aa11.59□□□□□ -0.55
FAM3A-216ENST00000449971 C15orf54Q8N8G6 183 aa11.59□□□□□ -0.55
FAM3A-216ENST00000449971 GTSF1Q8WW33 167 aa11.59□□□□□ -0.55
FAM3A-216ENST00000449971 SMIM7Q9BQ49 75 aa11.59□□□□□ -0.55
FAM3A-216ENST00000449971 DNAH8Q96JB1 4490 aa11.59□□□□□ -0.55
FAM3A-216ENST00000449971 TRBV25-1A0A075B6N4 114 aa11.58□□□□□ -0.56
FAM3A-216ENST00000449971 A8MWL6 223 aa11.58□□□□□ -0.56
FAM3A-216ENST00000449971 ANGP03950 147 aaKnown RBP11.58□□□□□ -0.56
FAM3A-216ENST00000449971 Q0VG73 95 aa11.58□□□□□ -0.56
FAM3A-216ENST00000449971 FAM231DQ6ZW35 169 aa11.58□□□□□ -0.56
FAM3A-216ENST00000449971 TMEM70Q9BUB7 260 aa11.58□□□□□ -0.56
FAM3A-216ENST00000449971 CNFNQ9BYD5 112 aa11.58□□□□□ -0.56
FAM3A-216ENST00000449971 NIT2Q9NQR4 276 aa11.58□□□□□ -0.56
FAM3A-216ENST00000449971 IGHV1-24A0A0C4DH33 117 aa11.57□□□□□ -0.56
FAM3A-216ENST00000449971 ZNF727A8MUV8 499 aa11.57□□□□□ -0.56
FAM3A-216ENST00000449971 SRP19P09132 144 aaKnown RBP11.57□□□□□ -0.56
FAM3A-216ENST00000449971 GAGE6Q13070 117 aa11.57□□□□□ -0.56
FAM3A-216ENST00000449971 ATRAIDQ6UW56 229 aa11.57□□□□□ -0.56
FAM3A-216ENST00000449971 SMIM15Q7Z3B0 74 aa11.57□□□□□ -0.56
FAM3A-216ENST00000449971 Q8N976 141 aa11.57□□□□□ -0.56
FAM3A-216ENST00000449971 PGLYRP4Q96LB8 373 aa11.57□□□□□ -0.56
FAM3A-216ENST00000449971 FAM30AQ9NZY2 134 aa11.57□□□□□ -0.56
FAM3A-216ENST00000449971 NDUFS6O75380 124 aaKnown RBP11.56□□□□□ -0.56
FAM3A-216ENST00000449971 CRPP02741 224 aa11.56□□□□□ -0.56
FAM3A-216ENST00000449971 ENHOQ6UWT2 76 aa11.56□□□□□ -0.56
FAM3A-216ENST00000449971 HMCN2Q8NDA2 5059 aa11.55□□□□□ -0.56
FAM3A-216ENST00000449971 RBX1P62877 108 aa11.55□□□□□ -0.56
FAM3A-216ENST00000449971 IQCJQ1A5X6 159 aa11.55□□□□□ -0.56
FAM3A-216ENST00000449971 LINC01551Q86U37 167 aa11.55□□□□□ -0.56
FAM3A-216ENST00000449971 DEFB104AQ8WTQ1 72 aa11.55□□□□□ -0.56
FAM3A-216ENST00000449971 C1orf43Q9BWL3 253 aa11.55□□□□□ -0.56
FAM3A-216ENST00000449971 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.54□□□□□ -0.56
FAM3A-216ENST00000449971 TRAV26-2A0A0B4J265 109 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms