RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 CHAC1Q9BUX1 264 aa6.6□□□□□ -1.35
SYN3-204ENST00000441821 MLST8Q9BVC4 326 aa6.6□□□□□ -1.35
SYN3-204ENST00000441821 TM2D2Q9BX73 214 aa6.6□□□□□ -1.35
SYN3-204ENST00000441821 GFRA4Q9GZZ7 299 aa6.6□□□□□ -1.35
SYN3-204ENST00000441821 IL36BQ9NZH7 164 aa6.6□□□□□ -1.35
SYN3-204ENST00000441821 NAT8BQ9UHF3 227 aa6.6□□□□□ -1.35
SYN3-204ENST00000441821 RS1O15537 224 aa6.59□□□□□ -1.35
SYN3-204ENST00000441821 S100A4P26447 101 aaKnown RBP6.59□□□□□ -1.35
SYN3-204ENST00000441821 LAGE3Q14657 143 aa6.59□□□□□ -1.35
SYN3-204ENST00000441821 TSKUQ8WUA8 353 aa6.59□□□□□ -1.35
SYN3-204ENST00000441821 RASL10AQ92737 203 aa6.59□□□□□ -1.35
SYN3-204ENST00000441821 TRAV8-6A0A0B4J262 113 aa6.58□□□□□ -1.36
SYN3-204ENST00000441821 A0A1B0GW15 77 aa6.58□□□□□ -1.36
SYN3-204ENST00000441821 F2Z2F3 143 aa6.58□□□□□ -1.36
SYN3-204ENST00000441821 K7EN84 100 aa6.58□□□□□ -1.36
SYN3-204ENST00000441821 SH2D1AO60880 128 aa6.58□□□□□ -1.36
SYN3-204ENST00000441821 PRR9Q5T870 116 aa6.58□□□□□ -1.36
SYN3-204ENST00000441821 WDR73Q6P4I2 378 aa6.58□□□□□ -1.36
SYN3-204ENST00000441821 Q6ZQT7 251 aa6.58□□□□□ -1.36
SYN3-204ENST00000441821 SMIM15Q7Z3B0 74 aa6.58□□□□□ -1.36
SYN3-204ENST00000441821 ZFAND2AQ8N6M9 145 aa6.58□□□□□ -1.36
SYN3-204ENST00000441821 NUDT10Q8NFP7 164 aa6.58□□□□□ -1.36
SYN3-204ENST00000441821 CIRBP-AS1Q8TBR5 109 aa6.58□□□□□ -1.36
SYN3-204ENST00000441821 NUDT11Q96G61 164 aa6.58□□□□□ -1.36
SYN3-204ENST00000441821 ZC2HC1AQ96GY0 325 aa6.58□□□□□ -1.36
SYN3-204ENST00000441821 RNASE7Q9H1E1 156 aaKnown RBP6.58□□□□□ -1.36
SYN3-204ENST00000441821 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.57□□□□□ -1.36
SYN3-204ENST00000441821 TRGV11A0A075B6L2 103 aa6.57□□□□□ -1.36
SYN3-204ENST00000441821 TRAV4A0A0B4J268 109 aa6.57□□□□□ -1.36
SYN3-204ENST00000441821 LOC100131303A0A0U1RQF7 123 aa6.57□□□□□ -1.36
SYN3-204ENST00000441821 IGLV2-8P01709 118 aa6.57□□□□□ -1.36
SYN3-204ENST00000441821 IGHV3-30P01768 117 aa6.57□□□□□ -1.36
SYN3-204ENST00000441821 IGHV3-33P01772 117 aa6.57□□□□□ -1.36
SYN3-204ENST00000441821 CXCL1P09341 107 aa6.57□□□□□ -1.36
SYN3-204ENST00000441821 IGHV3-30-3P0DP02 117 aa6.57□□□□□ -1.36
SYN3-204ENST00000441821 IGHV3-30-5P0DP03 117 aa6.57□□□□□ -1.36
SYN3-204ENST00000441821 ASIPP42127 132 aa6.57□□□□□ -1.36
SYN3-204ENST00000441821 RIGQ13278 110 aa6.57□□□□□ -1.36
SYN3-204ENST00000441821 LINC01620Q4KN68 170 aa6.57□□□□□ -1.36
SYN3-204ENST00000441821 OR10J3Q5JRS4 329 aa6.57□□□□□ -1.36
SYN3-204ENST00000441821 RASL11AQ6T310 242 aa6.57□□□□□ -1.36
SYN3-204ENST00000441821 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.57□□□□□ -1.36
SYN3-204ENST00000441821 SPXQ9BT56 116 aa6.57□□□□□ -1.36
SYN3-204ENST00000441821 NAGKQ9UJ70 344 aa6.57□□□□□ -1.36
SYN3-204ENST00000441821 URGCP-MRPS24S4R325 110 aa6.57□□□□□ -1.36
SYN3-204ENST00000441821 C19orf71A6NCJ1 209 aa6.56□□□□□ -1.36
SYN3-204ENST00000441821 LECT2O14960 151 aa6.56□□□□□ -1.36
SYN3-204ENST00000441821 MT-ND6P03923 174 aa6.56□□□□□ -1.36
SYN3-204ENST00000441821 LINC01559Q495D7 138 aa6.56□□□□□ -1.36
SYN3-204ENST00000441821 ATP5L2Q7Z4Y8 100 aa6.56□□□□□ -1.36
SYN3-204ENST00000441821 CBLN2Q8IUK8 224 aa6.56□□□□□ -1.36
SYN3-204ENST00000441821 FER1L6-AS1Q8NA97 138 aa6.56□□□□□ -1.36
SYN3-204ENST00000441821 V9GYV3 84 aa6.56□□□□□ -1.36
SYN3-204ENST00000441821 TRBV24-1A0A075B6N3 115 aa6.55□□□□□ -1.36
SYN3-204ENST00000441821 SMIM27A0A1W2PRY6 76 aa6.55□□□□□ -1.36
SYN3-204ENST00000441821 MT1HL1P0DM35 61 aa6.55□□□□□ -1.36
SYN3-204ENST00000441821 CACNG7P62955 275 aa6.55□□□□□ -1.36
SYN3-204ENST00000441821 ATRAIDQ6UW56 229 aa6.55□□□□□ -1.36
SYN3-204ENST00000441821 OR4C5Q8NGB2 326 aa6.55□□□□□ -1.36
SYN3-204ENST00000441821 TPPP3Q9BW30 176 aa6.55□□□□□ -1.36
SYN3-204ENST00000441821 TRAV8-3A0A0A6YYJ7 113 aa6.54□□□□□ -1.36
SYN3-204ENST00000441821 A0A1B0GUT8 65 aa6.54□□□□□ -1.36
SYN3-204ENST00000441821 HIGD1CA8MV81 97 aa6.54□□□□□ -1.36
SYN3-204ENST00000441821 SCO1O75880 301 aa6.54□□□□□ -1.36
SYN3-204ENST00000441821 GATA1P15976 413 aaPredicted RBP6.54□□□□□ -1.36
SYN3-204ENST00000441821 RAB5AP20339 215 aa6.54□□□□□ -1.36
SYN3-204ENST00000441821 RAB4BP61018 213 aa6.54□□□□□ -1.36
SYN3-204ENST00000441821 RPL37AP61513 92 aaKnown RBP6.54□□□□□ -1.36
SYN3-204ENST00000441821 ELOBQ15370 118 aa6.54□□□□□ -1.36
SYN3-204ENST00000441821 MUC21Q5SSG8 566 aa6.54□□□□□ -1.36
SYN3-204ENST00000441821 LELP1Q5T871 98 aa6.54□□□□□ -1.36
SYN3-204ENST00000441821 TMSB15BA0A087X1C1 80 aa6.53□□□□□ -1.36
SYN3-204ENST00000441821 C1orf196B1AJZ1 125 aa6.53□□□□□ -1.36
SYN3-204ENST00000441821 HLA-DQA1P01909 254 aa6.53□□□□□ -1.36
SYN3-204ENST00000441821 RPS10P46783 165 aaKnown RBP6.53□□□□□ -1.36
SYN3-204ENST00000441821 HNRNPA3P51991 378 aaKnown RBP6.53□□□□□ -1.36
SYN3-204ENST00000441821 HBBP68871 147 aa6.53□□□□□ -1.36
SYN3-204ENST00000441821 SPANXN1Q5VSR9 72 aa6.53□□□□□ -1.36
SYN3-204ENST00000441821 Q8N976 141 aa6.53□□□□□ -1.36
SYN3-204ENST00000441821 BAALCQ8WXS3 180 aa6.53□□□□□ -1.36
SYN3-204ENST00000441821 PHLDA3Q9Y5J5 127 aa6.53□□□□□ -1.36
SYN3-204ENST00000441821 COX11Q9Y6N1 276 aa6.53□□□□□ -1.36
SYN3-204ENST00000441821 IGHV3-16A0A0C4DH30 117 aa6.52□□□□□ -1.37
SYN3-204ENST00000441821 M0R2P5 195 aa6.52□□□□□ -1.37
SYN3-204ENST00000441821 TYMSP04818 313 aa6.52□□□□□ -1.37
SYN3-204ENST00000441821 OR5AL1P0C617 328 aa6.52□□□□□ -1.37
SYN3-204ENST00000441821 TRGC1P0CF51 173 aa6.52□□□□□ -1.37
SYN3-204ENST00000441821 SMIM17P0DL12 118 aa6.52□□□□□ -1.37
SYN3-204ENST00000441821 FOXA3P55318 350 aaPredicted RBP6.52□□□□□ -1.37
SYN3-204ENST00000441821 RAB5BP61020 215 aa6.52□□□□□ -1.37
SYN3-204ENST00000441821 SLC25A29Q8N8R3 303 aa6.52□□□□□ -1.37
SYN3-204ENST00000441821 NUP35Q8NFH5 326 aa6.52□□□□□ -1.37
SYN3-204ENST00000441821 PGLYRP4Q96LB8 373 aa6.52□□□□□ -1.37
SYN3-204ENST00000441821 GNB1LQ9BYB4 327 aa6.52□□□□□ -1.37
SYN3-204ENST00000441821 GTSF1LQ9H1H1 148 aa6.52□□□□□ -1.37
SYN3-204ENST00000441821 TGIF2-C20orf24A0A0A6YYL0 155 aa6.51□□□□□ -1.37
SYN3-204ENST00000441821 CRIP1P50238 77 aa6.51□□□□□ -1.37
SYN3-204ENST00000441821 ZNF80P51504 273 aaPredicted RBP6.51□□□□□ -1.37
SYN3-204ENST00000441821 TWIST1Q15672 202 aa6.51□□□□□ -1.37
SYN3-204ENST00000441821 ZFP82Q8N141 532 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms