RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 GFRA4Q9GZZ7 299 aa12.35□□□□□ -0.43
SMPD4-210ENST00000441135 NTF3P20783 257 aa12.34□□□□□ -0.43
SMPD4-210ENST00000441135 SRSF3P84103 164 aaKnown RBP12.34□□□□□ -0.43
SMPD4-210ENST00000441135 OR10J3Q5JRS4 329 aa12.34□□□□□ -0.43
SMPD4-210ENST00000441135 NEXN-AS1Q8NBZ9 246 aa12.34□□□□□ -0.43
SMPD4-210ENST00000441135 DPH3P1Q9H4G8 78 aa12.34□□□□□ -0.43
SMPD4-210ENST00000441135 MSRB1Q9NZV6 116 aa12.34□□□□□ -0.43
SMPD4-210ENST00000441135 NAT8Q9UHE5 227 aa12.34□□□□□ -0.43
SMPD4-210ENST00000441135 F5H697 171 aa12.33□□□□□ -0.44
SMPD4-210ENST00000441135 H7C1H1 209 aa12.33□□□□□ -0.44
SMPD4-210ENST00000441135 C15orf54Q8N8G6 183 aa12.33□□□□□ -0.44
SMPD4-210ENST00000441135 TSKUQ8WUA8 353 aa12.33□□□□□ -0.44
SMPD4-210ENST00000441135 ISOC2Q96AB3 205 aa12.33□□□□□ -0.44
SMPD4-210ENST00000441135 RYR1P21817 5038 aa12.32□□□□□ -0.44
SMPD4-210ENST00000441135 SSTP61278 116 aa12.32□□□□□ -0.44
SMPD4-210ENST00000441135 RPL23P62829 140 aaKnown RBP12.32□□□□□ -0.44
SMPD4-210ENST00000441135 CLLU1Q5K131 121 aa12.32□□□□□ -0.44
SMPD4-210ENST00000441135 EREGO14944 169 aa12.31□□□□□ -0.44
SMPD4-210ENST00000441135 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-210ENST00000441135 DNAJC30Q96LL9 226 aa12.31□□□□□ -0.44
SMPD4-210ENST00000441135 M0QY20 66 aa12.3□□□□□ -0.44
SMPD4-210ENST00000441135 KRTAP10-2P60368 255 aa12.3□□□□□ -0.44
SMPD4-210ENST00000441135 TWIST1Q15672 202 aa12.3□□□□□ -0.44
SMPD4-210ENST00000441135 TMEM97Q5BJF2 176 aa12.3□□□□□ -0.44
SMPD4-210ENST00000441135 V9GYV3 84 aa12.3□□□□□ -0.44
SMPD4-210ENST00000441135 MGPP08493 103 aa12.29□□□□□ -0.44
SMPD4-210ENST00000441135 ADIRFQ15847 76 aa12.29□□□□□ -0.44
SMPD4-210ENST00000441135 SMIM15Q7Z3B0 74 aa12.29□□□□□ -0.44
SMPD4-210ENST00000441135 DAZ4Q86SG3 579 aaKnown RBP12.29□□□□□ -0.44
SMPD4-210ENST00000441135 FRZBQ92765 325 aa12.29□□□□□ -0.44
SMPD4-210ENST00000441135 CHCHD7Q9BUK0 85 aa12.29□□□□□ -0.44
SMPD4-210ENST00000441135 DAZ3Q9NR90 486 aaKnown RBP12.29□□□□□ -0.44
SMPD4-210ENST00000441135 HIGD1CA8MV81 97 aa12.28□□□□□ -0.44
SMPD4-210ENST00000441135 LAGE3Q14657 143 aa12.28□□□□□ -0.44
SMPD4-210ENST00000441135 SUMO4Q6EEV6 95 aa12.28□□□□□ -0.44
SMPD4-210ENST00000441135 BORCS7Q96B45 105 aa12.28□□□□□ -0.44
SMPD4-210ENST00000441135 IBA57-AS1B1ANH7 110 aa12.27□□□□□ -0.45
SMPD4-210ENST00000441135 RASL11AQ6T310 242 aa12.27□□□□□ -0.45
SMPD4-210ENST00000441135 PGLYRP4Q96LB8 373 aa12.27□□□□□ -0.45
SMPD4-210ENST00000441135 TNFRSF18Q9Y5U5 241 aa12.27□□□□□ -0.45
SMPD4-210ENST00000441135 LRP1BQ9NZR2 4599 aa12.27□□□□□ -0.45
SMPD4-210ENST00000441135 TRBV6-8A0A0A6YYG3 113 aa12.26□□□□□ -0.45
SMPD4-210ENST00000441135 A0A1B0GUT8 65 aa12.26□□□□□ -0.45
SMPD4-210ENST00000441135 IFITM2Q01629 132 aa12.26□□□□□ -0.45
SMPD4-210ENST00000441135 CDPF1Q6NVV7 123 aa12.26□□□□□ -0.45
SMPD4-210ENST00000441135 PGPEP1Q9NXJ5 209 aa12.26□□□□□ -0.45
SMPD4-210ENST00000441135 PKIAP61925 76 aa12.25□□□□□ -0.45
SMPD4-210ENST00000441135 NIT1Q86X76 327 aa12.25□□□□□ -0.45
SMPD4-210ENST00000441135 NIT2Q9NQR4 276 aa12.25□□□□□ -0.45
SMPD4-210ENST00000441135 NAT8BQ9UHF3 227 aa12.24□□□□□ -0.45
SMPD4-210ENST00000441135 HSPG2P98160 4391 aa12.24□□□□□ -0.45
SMPD4-210ENST00000441135 A0A087WTM6 91 aa12.23□□□□□ -0.45
SMPD4-210ENST00000441135 SMIM27A0A1W2PRY6 76 aa12.23□□□□□ -0.45
SMPD4-210ENST00000441135 IGHV3-30P01768 117 aa12.23□□□□□ -0.45
SMPD4-210ENST00000441135 IGHV3-33P01772 117 aa12.23□□□□□ -0.45
SMPD4-210ENST00000441135 IGHV3-30-3P0DP02 117 aa12.23□□□□□ -0.45
SMPD4-210ENST00000441135 IGHV3-30-5P0DP03 117 aa12.23□□□□□ -0.45
SMPD4-210ENST00000441135 PNRC1Q12796 327 aaPredicted RBP12.23□□□□□ -0.45
SMPD4-210ENST00000441135 MAPKAPK5-AS1Q8N8E1 139 aa12.23□□□□□ -0.45
SMPD4-210ENST00000441135 TMEM191AQ9H0A3 160 aa12.23□□□□□ -0.45
SMPD4-210ENST00000441135 RIGQ13278 110 aa12.22□□□□□ -0.45
SMPD4-210ENST00000441135 KCNIP4Q6PIL6 250 aa12.22□□□□□ -0.45
SMPD4-210ENST00000441135 UQCC3Q6UW78 93 aa12.22□□□□□ -0.45
SMPD4-210ENST00000441135 NUP35Q8NFH5 326 aa12.22□□□□□ -0.45
SMPD4-210ENST00000441135 URGCP-MRPS24S4R325 110 aa12.22□□□□□ -0.45
SMPD4-210ENST00000441135 ELOBQ15370 118 aa12.21□□□□□ -0.45
SMPD4-210ENST00000441135 IQCJQ1A5X6 159 aa12.21□□□□□ -0.45
SMPD4-210ENST00000441135 GATD1Q8NB37 220 aa12.21□□□□□ -0.45
SMPD4-210ENST00000441135 TRAV8-3A0A0A6YYJ7 113 aa12.2□□□□□ -0.46
SMPD4-210ENST00000441135 PPP1R2P9O14990 202 aa12.2□□□□□ -0.46
SMPD4-210ENST00000441135 TRBV25-1A0A075B6N4 114 aa12.19□□□□□ -0.46
SMPD4-210ENST00000441135 A0A087WX48 190 aa12.19□□□□□ -0.46
SMPD4-210ENST00000441135 A0A1B0GW15 77 aa12.19□□□□□ -0.46
SMPD4-210ENST00000441135 NTM-AS1Q6ZSK4 140 aa12.19□□□□□ -0.46
SMPD4-210ENST00000441135 ABCA13Q86UQ4 5058 aa12.18□□□□□ -0.46
SMPD4-210ENST00000441135 IGHV1-24A0A0C4DH33 117 aa12.18□□□□□ -0.46
SMPD4-210ENST00000441135 PSCAO43653 123 aa12.18□□□□□ -0.46
SMPD4-210ENST00000441135 Q8N3U1 123 aa12.18□□□□□ -0.46
SMPD4-210ENST00000441135 KRTAP4-5Q9BYR2 181 aa12.18□□□□□ -0.46
SMPD4-210ENST00000441135 APOBP04114 4563 aaKnown RBP12.17□□□□□ -0.46
SMPD4-210ENST00000441135 TRBV6-5A0A0K0K1A5 114 aa12.17□□□□□ -0.46
SMPD4-210ENST00000441135 Q8N1X5 172 aa12.17□□□□□ -0.46
SMPD4-210ENST00000441135 MRAP2Q96G30 205 aa12.17□□□□□ -0.46
SMPD4-210ENST00000441135 TM2D2Q9BX73 214 aa12.17□□□□□ -0.46
SMPD4-210ENST00000441135 DNAH5Q8TE73 4624 aa12.16□□□□□ -0.46
SMPD4-210ENST00000441135 TRAV26-2A0A0B4J265 109 aa12.16□□□□□ -0.46
SMPD4-210ENST00000441135 RNF185Q96GF1 192 aa12.16□□□□□ -0.46
SMPD4-210ENST00000441135 CHCHD5Q9BSY4 110 aa12.16□□□□□ -0.46
SMPD4-210ENST00000441135 Q9HAA7 133 aa12.16□□□□□ -0.46
SMPD4-210ENST00000441135 COX11Q9Y6N1 276 aa12.16□□□□□ -0.46
SMPD4-210ENST00000441135 S100A8P05109 93 aa12.15□□□□□ -0.46
SMPD4-210ENST00000441135 RAB4AP20338 218 aa12.15□□□□□ -0.46
SMPD4-210ENST00000441135 COTL1Q14019 142 aa12.15□□□□□ -0.46
SMPD4-210ENST00000441135 ANAPC16Q96DE5 110 aa12.15□□□□□ -0.46
SMPD4-210ENST00000441135 RMI2Q96E14 147 aa12.15□□□□□ -0.46
SMPD4-210ENST00000441135 TMEM262E9PQX1 116 aa12.14□□□□□ -0.47
SMPD4-210ENST00000441135 NCR2O95944 276 aa12.14□□□□□ -0.47
SMPD4-210ENST00000441135 FUSP35637 526 aaKnown RBP eCLIP12.14□□□□□ -0.47
SMPD4-210ENST00000441135 Q0VG73 95 aa12.14□□□□□ -0.47
SMPD4-210ENST00000441135 MPV17L2Q567V2 206 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms