RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 ATXN8Q156A1 80 aa8.85□□□□□ -0.99
SMPD4-209ENST00000439886 IGHV3-30P01768 117 aa8.85□□□□□ -0.99
SMPD4-209ENST00000439886 IGHV3-30-5P0DP03 117 aa8.85□□□□□ -0.99
SMPD4-209ENST00000439886 H3BMM0 161 aa8.84□□□□□ -0.99
SMPD4-209ENST00000439886 LINC01620Q4KN68 170 aa8.84□□□□□ -0.99
SMPD4-209ENST00000439886 PAPPA-AS1Q5QFB9 102 aa8.84□□□□□ -0.99
SMPD4-209ENST00000439886 UBE2WQ96B02 151 aa8.84□□□□□ -0.99
SMPD4-209ENST00000439886 C20orf173Q96LM9 149 aa8.84□□□□□ -0.99
SMPD4-209ENST00000439886 RELNP78509 3460 aa8.84□□□□□ -0.99
SMPD4-209ENST00000439886 A0A0J9YXV3 536 aa8.84□□□□□ -0.99
SMPD4-209ENST00000439886 LY6LH3BQJ8 138 aa8.84□□□□□ -0.99
SMPD4-209ENST00000439886 MALP21145 153 aa8.84□□□□□ -0.99
SMPD4-209ENST00000439886 LY6DQ14210 128 aa8.84□□□□□ -0.99
SMPD4-209ENST00000439886 LY6EQ16553 131 aa8.84□□□□□ -0.99
SMPD4-209ENST00000439886 ZNF580Q9UK33 172 aa8.84□□□□□ -0.99
SMPD4-209ENST00000439886 COX6CP09669 75 aa8.84□□□□□ -0.99
SMPD4-209ENST00000439886 RPS28P62857 69 aaKnown RBP8.84□□□□□ -0.99
SMPD4-209ENST00000439886 ZNRF2Q8NHG8 242 aa8.84□□□□□ -0.99
SMPD4-209ENST00000439886 CLEC2BQ92478 149 aa8.84□□□□□ -0.99
SMPD4-209ENST00000439886 RPL13AP40429 203 aaKnown RBP8.83□□□□□ -1
SMPD4-209ENST00000439886 Q6ZSV7 163 aa8.83□□□□□ -1
SMPD4-209ENST00000439886 NPBQ8NG41 125 aa8.83□□□□□ -1
SMPD4-209ENST00000439886 TMEM190Q8WZ59 177 aa8.83□□□□□ -1
SMPD4-209ENST00000439886 LINC00526Q96FQ7 95 aa8.83□□□□□ -1
SMPD4-209ENST00000439886 VCYO14598 125 aa8.83□□□□□ -1
SMPD4-209ENST00000439886 ELANEP08246 267 aa8.83□□□□□ -1
SMPD4-209ENST00000439886 SLC25A29Q8N8R3 303 aa8.83□□□□□ -1
SMPD4-209ENST00000439886 TRAV12-2A0A075B6T6 113 aa8.82□□□□□ -1
SMPD4-209ENST00000439886 DAND5Q8N907 189 aa8.82□□□□□ -1
SMPD4-209ENST00000439886 C10orf105Q8TEF2 133 aa8.82□□□□□ -1
SMPD4-209ENST00000439886 CRYGDP07320 174 aa8.82□□□□□ -1
SMPD4-209ENST00000439886 SUMO4Q6EEV6 95 aa8.82□□□□□ -1
SMPD4-209ENST00000439886 ZNF625Q96I27 306 aaPredicted RBP8.82□□□□□ -1
SMPD4-209ENST00000439886 ZFAND3Q9H8U3 227 aa8.82□□□□□ -1
SMPD4-209ENST00000439886 AKAP13Q12802 2813 aa8.82□□□□□ -1
SMPD4-209ENST00000439886 M0R2P5 195 aa8.82□□□□□ -1
SMPD4-209ENST00000439886 IGHV3-33P01772 117 aa8.82□□□□□ -1
SMPD4-209ENST00000439886 COX8CQ7Z4L0 72 aa8.82□□□□□ -1
SMPD4-209ENST00000439886 CCDC140Q96MF4 163 aa8.82□□□□□ -1
SMPD4-209ENST00000439886 SIRPDQ9H106 197 aa8.82□□□□□ -1
SMPD4-209ENST00000439886 LINC01546A6NGU7 62 aa8.81□□□□□ -1
SMPD4-209ENST00000439886 LINC00336Q6ZUF6 198 aa8.81□□□□□ -1
SMPD4-209ENST00000439886 PRRC2AP48634 2157 aaKnown RBP8.81□□□□□ -1
SMPD4-209ENST00000439886 DCHS2Q6V1P9 2916 aa8.81□□□□□ -1
SMPD4-209ENST00000439886 TRBV12-3P01733 135 aa8.81□□□□□ -1
SMPD4-209ENST00000439886 UNQ9165/PRO28630Q6UXU0 137 aa8.81□□□□□ -1
SMPD4-209ENST00000439886 Q8N9W7 124 aa8.81□□□□□ -1
SMPD4-209ENST00000439886 WFDC11Q8NEX6 87 aa8.81□□□□□ -1
SMPD4-209ENST00000439886 IGLV4-69A0A075B6H9 119 aa8.81□□□□□ -1
SMPD4-209ENST00000439886 TRAV13-1A0A0B4J241 112 aa8.81□□□□□ -1
SMPD4-209ENST00000439886 COX6B1P14854 86 aa8.81□□□□□ -1
SMPD4-209ENST00000439886 ZNF876PQ49A33 203 aa8.81□□□□□ -1
SMPD4-209ENST00000439886 DPH3Q96FX2 82 aa8.81□□□□□ -1
SMPD4-209ENST00000439886 CLPSL1A2RUU4 121 aa8.8□□□□□ -1
SMPD4-209ENST00000439886 A8MZ25 164 aa8.8□□□□□ -1
SMPD4-209ENST00000439886 PPP1R17O96001 155 aa8.8□□□□□ -1
SMPD4-209ENST00000439886 TSHBP01222 138 aa8.8□□□□□ -1
SMPD4-209ENST00000439886 C1orf195Q5TG92 126 aa8.8□□□□□ -1
SMPD4-209ENST00000439886 C9orf47Q6ZRZ4 202 aa8.8□□□□□ -1
SMPD4-209ENST00000439886 IGF2RP11717 2491 aa8.8□□□□□ -1
SMPD4-209ENST00000439886 MUC6Q6W4X9 2439 aa8.8□□□□□ -1
SMPD4-209ENST00000439886 PLA2G2CQ5R387 149 aa8.8□□□□□ -1
SMPD4-209ENST00000439886 C9orf139Q6ZV77 190 aa8.8□□□□□ -1
SMPD4-209ENST00000439886 FAM110DQ8TAY7 271 aaPredicted RBP8.8□□□□□ -1
SMPD4-209ENST00000439886 KLK9Q9UKQ9 250 aa8.8□□□□□ -1
SMPD4-209ENST00000439886 KLRB1Q12918 225 aa8.79□□□□□ -1
SMPD4-209ENST00000439886 SPTBN4Q9H254 2564 aa8.79□□□□□ -1
SMPD4-209ENST00000439886 OVOL1O14753 267 aa8.79□□□□□ -1
SMPD4-209ENST00000439886 CD28P10747 220 aa8.79□□□□□ -1
SMPD4-209ENST00000439886 PFN2P35080 140 aa8.79□□□□□ -1
SMPD4-209ENST00000439886 NSUN5P1Q3KNT7 163 aa8.79□□□□□ -1
SMPD4-209ENST00000439886 LINC01619G3V211 115 aa8.79□□□□□ -1
SMPD4-209ENST00000439886 CCL21O00585 134 aa8.79□□□□□ -1
SMPD4-209ENST00000439886 TRIAP1O43715 76 aa8.79□□□□□ -1
SMPD4-209ENST00000439886 SAA4P35542 130 aa8.79□□□□□ -1
SMPD4-209ENST00000439886 UBE2E1P51965 193 aa8.79□□□□□ -1
SMPD4-209ENST00000439886 ZFAND2AQ8N6M9 145 aa8.79□□□□□ -1
SMPD4-209ENST00000439886 PYGO1Q9Y3Y4 419 aa8.79□□□□□ -1
SMPD4-209ENST00000439886 WNK1Q9H4A3 2382 aa8.78□□□□□ -1
SMPD4-209ENST00000439886 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.78□□□□□ -1
SMPD4-209ENST00000439886 PTPRQQ9UMZ3 2332 aa8.78□□□□□ -1
SMPD4-209ENST00000439886 KNCNA6PVL3 124 aa8.78□□□□□ -1
SMPD4-209ENST00000439886 PSMG3-AS1Q96PY0 264 aa8.78□□□□□ -1
SMPD4-209ENST00000439886 BRD3OSQ6XYD6 125 aa8.78□□□□□ -1
SMPD4-209ENST00000439886 TIMM21Q9BVV7 248 aa8.78□□□□□ -1
SMPD4-209ENST00000439886 COX7CP15954 63 aa8.77□□□□□ -1.01
SMPD4-209ENST00000439886 IL17DQ8TAD2 202 aa8.77□□□□□ -1.01
SMPD4-209ENST00000439886 LGALS9O00182 355 aa8.77□□□□□ -1.01
SMPD4-209ENST00000439886 ZNF22P17026 224 aaPredicted RBP8.77□□□□□ -1.01
SMPD4-209ENST00000439886 CHD8Q9HCK8 2581 aa8.77□□□□□ -1.01
SMPD4-209ENST00000439886 RNASE3P12724 160 aaKnown RBP8.76□□□□□ -1.01
SMPD4-209ENST00000439886 ZFP36P26651 326 aaKnown RBP8.76□□□□□ -1.01
SMPD4-209ENST00000439886 GPHB5Q86YW7 130 aa8.76□□□□□ -1.01
SMPD4-209ENST00000439886 TMEM141Q96I45 108 aa8.76□□□□□ -1.01
SMPD4-209ENST00000439886 MUC4Q99102 2169 aa8.76□□□□□ -1.01
SMPD4-209ENST00000439886 BRK1Q8WUW1 75 aa8.76□□□□□ -1.01
SMPD4-209ENST00000439886 RHPN1-AS1Q9BWJ2 59 aa8.76□□□□□ -1.01
SMPD4-209ENST00000439886 NCOR2Q9Y618 2525 aa8.76□□□□□ -1.01
SMPD4-209ENST00000439886 IGIPA6NJ69 53 aa8.76□□□□□ -1.01
SMPD4-209ENST00000439886 TMEM263Q8WUH6 116 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms