RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 C14orf178Q8N769 122 aaPredicted RBP6.63□□□□□ -1.35
CDH13-202ENST00000428848 OR10J6PQ8NGY7 276 aa6.63□□□□□ -1.35
CDH13-202ENST00000428848 UTP20O75691 2785 aaKnown RBP6.63□□□□□ -1.35
CDH13-202ENST00000428848 SPTBN1Q01082 2364 aaKnown RBP6.63□□□□□ -1.35
CDH13-202ENST00000428848 IGHV4OR15-8A0A075B7B6 117 aa6.62□□□□□ -1.35
CDH13-202ENST00000428848 A0A087WW49 117 aa6.62□□□□□ -1.35
CDH13-202ENST00000428848 TRAV4A0A0B4J268 109 aa6.62□□□□□ -1.35
CDH13-202ENST00000428848 PPP1R17O96001 155 aa6.62□□□□□ -1.35
CDH13-202ENST00000428848 OR13C6PQ8NH95 151 aa6.62□□□□□ -1.35
CDH13-202ENST00000428848 PHLDA3Q9Y5J5 127 aa6.62□□□□□ -1.35
CDH13-202ENST00000428848 TSHBP01222 138 aa6.62□□□□□ -1.35
CDH13-202ENST00000428848 TRBV12-3P01733 135 aa6.62□□□□□ -1.35
CDH13-202ENST00000428848 S100A4P26447 101 aaKnown RBP6.62□□□□□ -1.35
CDH13-202ENST00000428848 DEFB1P60022 68 aa6.62□□□□□ -1.35
CDH13-202ENST00000428848 DUX5Q96PT3 197 aa6.62□□□□□ -1.35
CDH13-202ENST00000428848 MDFICQ9P1T7 246 aa6.62□□□□□ -1.35
CDH13-202ENST00000428848 SPTAN1Q13813 2472 aaKnown RBP6.62□□□□□ -1.35
CDH13-202ENST00000428848 IGLV4-69A0A075B6H9 119 aa6.61□□□□□ -1.35
CDH13-202ENST00000428848 H3BUA1 57 aa6.61□□□□□ -1.35
CDH13-202ENST00000428848 GNRH2O43555 120 aa6.61□□□□□ -1.35
CDH13-202ENST00000428848 RPL13AP40429 203 aaKnown RBP6.61□□□□□ -1.35
CDH13-202ENST00000428848 POLR2KP53803 58 aaKnown RBP6.61□□□□□ -1.35
CDH13-202ENST00000428848 SFTA2Q6UW10 78 aa6.61□□□□□ -1.35
CDH13-202ENST00000428848 TMEM219Q86XT9 240 aa6.61□□□□□ -1.35
CDH13-202ENST00000428848 PLEKHB2Q96CS7 222 aa6.61□□□□□ -1.35
CDH13-202ENST00000428848 PRO1854Q9UHT4 67 aa6.61□□□□□ -1.35
CDH13-202ENST00000428848 ABCA2Q9BZC7 2435 aa6.61□□□□□ -1.35
CDH13-202ENST00000428848 A0A0J9YY99 117 aa6.61□□□□□ -1.35
CDH13-202ENST00000428848 A0A1B0GX51 115 aa6.61□□□□□ -1.35
CDH13-202ENST00000428848 IGIPA6NJ69 53 aa6.61□□□□□ -1.35
CDH13-202ENST00000428848 B4DSR2 109 aa6.61□□□□□ -1.35
CDH13-202ENST00000428848 DUSP14O95147 198 aaKnown RBP6.61□□□□□ -1.35
CDH13-202ENST00000428848 P0DMU3 169 aa6.61□□□□□ -1.35
CDH13-202ENST00000428848 FAM231AP0DMU4 169 aa6.61□□□□□ -1.35
CDH13-202ENST00000428848 FAM231CP0DMU5 169 aa6.61□□□□□ -1.35
CDH13-202ENST00000428848 HERVK_113P61574 105 aa6.61□□□□□ -1.35
CDH13-202ENST00000428848 MEIG1Q5JSS6 88 aa6.61□□□□□ -1.35
CDH13-202ENST00000428848 PAPPA-AS1Q5QFB9 102 aa6.61□□□□□ -1.35
CDH13-202ENST00000428848 FAM159AQ6UWV7 190 aa6.61□□□□□ -1.35
CDH13-202ENST00000428848 LINC00527Q9UJ94 153 aa6.61□□□□□ -1.35
CDH13-202ENST00000428848 SVEP1Q4LDE5 3571 aa6.61□□□□□ -1.35
CDH13-202ENST00000428848 J3KT08 172 aa6.6□□□□□ -1.35
CDH13-202ENST00000428848 CRLF1O75462 422 aa6.6□□□□□ -1.35
CDH13-202ENST00000428848 MSMBP08118 114 aa6.6□□□□□ -1.35
CDH13-202ENST00000428848 MGPP08493 103 aa6.6□□□□□ -1.35
CDH13-202ENST00000428848 CFC1BP0CG36 223 aa6.6□□□□□ -1.35
CDH13-202ENST00000428848 CFC1P0CG37 223 aa6.6□□□□□ -1.35
CDH13-202ENST00000428848 RNASE4P34096 147 aaKnown RBP6.6□□□□□ -1.35
CDH13-202ENST00000428848 HIST2H2BCQ6DN03 193 aa6.6□□□□□ -1.35
CDH13-202ENST00000428848 TRAV8-4A0A0B4J246 113 aa6.59□□□□□ -1.35
CDH13-202ENST00000428848 IGHV4-61A0A0C4DH41 118 aa6.59□□□□□ -1.35
CDH13-202ENST00000428848 C11orf86A6NJI1 115 aa6.59□□□□□ -1.35
CDH13-202ENST00000428848 KLLNB2CW77 178 aa6.59□□□□□ -1.35
CDH13-202ENST00000428848 C9JAW5 83 aa6.59□□□□□ -1.35
CDH13-202ENST00000428848 F6UB75 175 aa6.59□□□□□ -1.35
CDH13-202ENST00000428848 IGHV3-30P01768 117 aa6.59□□□□□ -1.35
CDH13-202ENST00000428848 IGHV3-30-5P0DP03 117 aa6.59□□□□□ -1.35
CDH13-202ENST00000428848 USMG5Q96IX5 58 aa6.59□□□□□ -1.35
CDH13-202ENST00000428848 Q8N1Y9 231 aa6.59□□□□□ -1.35
CDH13-202ENST00000428848 ODF3Q96PU9 254 aa6.59□□□□□ -1.35
CDH13-202ENST00000428848 SPANXDQ9BXN6 97 aa6.59□□□□□ -1.35
CDH13-202ENST00000428848 ZFHX3Q15911 3703 aa6.59□□□□□ -1.35
CDH13-202ENST00000428848 SLC25A29Q8N8R3 303 aa6.58□□□□□ -1.36
CDH13-202ENST00000428848 C15orf53Q8NAA6 179 aa6.58□□□□□ -1.36
CDH13-202ENST00000428848 KLHL30-AS1Q8NEE0 82 aa6.58□□□□□ -1.36
CDH13-202ENST00000428848 TIMM17AQ99595 171 aa6.58□□□□□ -1.36
CDH13-202ENST00000428848 J3QLI3 93 aa6.58□□□□□ -1.36
CDH13-202ENST00000428848 IGHG2P01859 326 aa6.58□□□□□ -1.36
CDH13-202ENST00000428848 RPS28P62857 69 aaKnown RBP6.58□□□□□ -1.36
CDH13-202ENST00000428848 NOTCH2Q04721 2471 aa6.58□□□□□ -1.36
CDH13-202ENST00000428848 PMVKQ15126 192 aa6.58□□□□□ -1.36
CDH13-202ENST00000428848 ATXN8Q156A1 80 aa6.58□□□□□ -1.36
CDH13-202ENST00000428848 NTN5Q8WTR8 489 aaPredicted RBP6.58□□□□□ -1.36
CDH13-202ENST00000428848 TMEM141Q96I45 108 aa6.58□□□□□ -1.36
CDH13-202ENST00000428848 AMELXQ99217 191 aa6.58□□□□□ -1.36
CDH13-202ENST00000428848 TP53TG1Q9Y2A0 90 aa6.58□□□□□ -1.36
CDH13-202ENST00000428848 A0A0B4J2C4 111 aa6.57□□□□□ -1.36
CDH13-202ENST00000428848 TRBV6-5A0A0K0K1A5 114 aa6.57□□□□□ -1.36
CDH13-202ENST00000428848 FAM240AA0A1B0GVK7 77 aa6.57□□□□□ -1.36
CDH13-202ENST00000428848 SUMO4Q6EEV6 95 aa6.57□□□□□ -1.36
CDH13-202ENST00000428848 RHPN1-AS1Q9BWJ2 59 aa6.57□□□□□ -1.36
CDH13-202ENST00000428848 AKAP6Q13023 2319 aa6.57□□□□□ -1.36
CDH13-202ENST00000428848 IGHV4-30-2A0A087WSY4 118 aa6.57□□□□□ -1.36
CDH13-202ENST00000428848 TRBV27A0A0K0K1C4 114 aa6.57□□□□□ -1.36
CDH13-202ENST00000428848 LGALS9O00182 355 aa6.57□□□□□ -1.36
CDH13-202ENST00000428848 VCYO14598 125 aa6.57□□□□□ -1.36
CDH13-202ENST00000428848 TSPEAR-AS2P59090 65 aa6.57□□□□□ -1.36
CDH13-202ENST00000428848 ZNF876PQ49A33 203 aa6.57□□□□□ -1.36
CDH13-202ENST00000428848 LINC01620Q4KN68 170 aa6.57□□□□□ -1.36
CDH13-202ENST00000428848 JPT2Q9H910 190 aa6.57□□□□□ -1.36
CDH13-202ENST00000428848 TRAV2A0A0B4J234 112 aa6.56□□□□□ -1.36
CDH13-202ENST00000428848 TRBV10-2A0A0K0K1G8 114 aa6.56□□□□□ -1.36
CDH13-202ENST00000428848 A6NDX4 124 aa6.56□□□□□ -1.36
CDH13-202ENST00000428848 F5H768 121 aa6.56□□□□□ -1.36
CDH13-202ENST00000428848 IGHV3-33P01772 117 aa6.56□□□□□ -1.36
CDH13-202ENST00000428848 RPL39P62891 51 aaKnown RBP6.56□□□□□ -1.36
CDH13-202ENST00000428848 BRD3OSQ6XYD6 125 aa6.56□□□□□ -1.36
CDH13-202ENST00000428848 Q6ZS46 218 aa6.56□□□□□ -1.36
CDH13-202ENST00000428848 LINC01356Q8N9X3 169 aa6.56□□□□□ -1.36
CDH13-202ENST00000428848 ZNRF2Q8NHG8 242 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms