RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 ABCC1P33527 1531 aa2.12□□□□□ -2.07
SF3B1-205ENST00000424674 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.12□□□□□ -2.07
SF3B1-205ENST00000424674 ABCC2Q92887 1545 aa2.12□□□□□ -2.07
SF3B1-205ENST00000424674 HFM1A2PYH4 1435 aa2.12□□□□□ -2.07
SF3B1-205ENST00000424674 IGKV2D-24A0A075B6R9 120 aa2.12□□□□□ -2.07
SF3B1-205ENST00000424674 VMO1Q7Z5L0 202 aa2.12□□□□□ -2.07
SF3B1-205ENST00000424674 LINC00643Q86TS7 51 aa2.12□□□□□ -2.07
SF3B1-205ENST00000424674 Q8N6K4 173 aa2.12□□□□□ -2.07
SF3B1-205ENST00000424674 MRPL36Q9P0J6 103 aaKnown RBP2.12□□□□□ -2.07
SF3B1-205ENST00000424674 HIGD1BQ9P298 99 aa2.12□□□□□ -2.07
SF3B1-205ENST00000424674 IQSEC2Q5JU85 1478 aa2.12□□□□□ -2.07
SF3B1-205ENST00000424674 KIAA1549Q9HCM3 1950 aa2.12□□□□□ -2.07
SF3B1-205ENST00000424674 KCPQ6ZWJ8 1503 aa2.12□□□□□ -2.07
SF3B1-205ENST00000424674 CFAP74Q9C0B2 1584 aa2.11□□□□□ -2.07
SF3B1-205ENST00000424674 LAMB2P55268 1798 aa2.11□□□□□ -2.07
SF3B1-205ENST00000424674 TRAV22A0A0B4J277 110 aa2.11□□□□□ -2.07
SF3B1-205ENST00000424674 A0A0G2JND7 137 aa2.11□□□□□ -2.07
SF3B1-205ENST00000424674 LOC285095A0A1B0GVY8 99 aa2.11□□□□□ -2.07
SF3B1-205ENST00000424674 NUPR2A6NF83 97 aa2.11□□□□□ -2.07
SF3B1-205ENST00000424674 UBE2D1P51668 147 aa2.11□□□□□ -2.07
SF3B1-205ENST00000424674 EDDM3BP56851 147 aa2.11□□□□□ -2.07
SF3B1-205ENST00000424674 TMEM170BQ5T4T1 132 aa2.11□□□□□ -2.07
SF3B1-205ENST00000424674 CSAG1Q6PB30 78 aa2.11□□□□□ -2.07
SF3B1-205ENST00000424674 SHANK2Q9UPX8 1470 aa2.11□□□□□ -2.07
SF3B1-205ENST00000424674 PTPRFP10586 1907 aa2.11□□□□□ -2.07
SF3B1-205ENST00000424674 RGPD3A6NKT7 1758 aaPredicted RBP2.1□□□□□ -2.07
SF3B1-205ENST00000424674 STRCQ7RTU9 1775 aa2.1□□□□□ -2.07
SF3B1-205ENST00000424674 COL16A1Q07092 1604 aaPredicted RBP2.1□□□□□ -2.07
SF3B1-205ENST00000424674 SHROOM2Q13796 1616 aa2.1□□□□□ -2.07
SF3B1-205ENST00000424674 CHKB-CPT1BH3BT56 60 aa2.1□□□□□ -2.07
SF3B1-205ENST00000424674 IGHV3-30P01768 117 aa2.1□□□□□ -2.07
SF3B1-205ENST00000424674 TFF1P04155 84 aa2.1□□□□□ -2.07
SF3B1-205ENST00000424674 SMIM13P0DJ93 91 aa2.1□□□□□ -2.07
SF3B1-205ENST00000424674 IGHV3-30-5P0DP03 117 aa2.1□□□□□ -2.07
SF3B1-205ENST00000424674 ELOF1P60002 83 aaKnown RBP2.1□□□□□ -2.07
SF3B1-205ENST00000424674 CFAP126Q5VTH2 177 aa2.1□□□□□ -2.07
SF3B1-205ENST00000424674 PATE1Q8WXA2 126 aa2.1□□□□□ -2.07
SF3B1-205ENST00000424674 ODF3Q96PU9 254 aa2.1□□□□□ -2.07
SF3B1-205ENST00000424674 CYSTM1Q9H1C7 97 aa2.1□□□□□ -2.07
SF3B1-205ENST00000424674 ANAPC11Q9NYG5 84 aa2.1□□□□□ -2.07
SF3B1-205ENST00000424674 DUOX2Q9NRD8 1548 aa2.1□□□□□ -2.07
SF3B1-205ENST00000424674 COL11A1P12107 1806 aaPredicted RBP2.1□□□□□ -2.07
SF3B1-205ENST00000424674 CLTCQ00610 1675 aaKnown RBP2.09□□□□□ -2.07
SF3B1-205ENST00000424674 LAMB4A4D0S4 1761 aa2.09□□□□□ -2.07
SF3B1-205ENST00000424674 TRBV25-1A0A075B6N4 114 aa2.09□□□□□ -2.07
SF3B1-205ENST00000424674 A0A087WWC5 75 aa2.09□□□□□ -2.07
SF3B1-205ENST00000424674 TRBV6-8A0A0A6YYG3 113 aa2.09□□□□□ -2.07
SF3B1-205ENST00000424674 SDHAF1A6NFY7 115 aa2.09□□□□□ -2.07
SF3B1-205ENST00000424674 TMEM14DPA8MWL7 114 aa2.09□□□□□ -2.07
SF3B1-205ENST00000424674 RTL8CO15255 209 aa2.09□□□□□ -2.07
SF3B1-205ENST00000424674 KRTAP1-4P0C5Y4 121 aa2.09□□□□□ -2.07
SF3B1-205ENST00000424674 KRTAP10-8P60410 259 aa2.09□□□□□ -2.07
SF3B1-205ENST00000424674 GNGT1P63211 74 aa2.09□□□□□ -2.07
SF3B1-205ENST00000424674 TVP23CQ96ET8 276 aa2.09□□□□□ -2.07
SF3B1-205ENST00000424674 DYNLRB1Q9NP97 96 aa2.09□□□□□ -2.07
SF3B1-205ENST00000424674 ABCA8O94911 1581 aa2.09□□□□□ -2.08
SF3B1-205ENST00000424674 INO80Q9ULG1 1556 aaPredicted RBP2.09□□□□□ -2.08
SF3B1-205ENST00000424674 TRPM7Q96QT4 1865 aa2.09□□□□□ -2.08
SF3B1-205ENST00000424674 MYO16Q9Y6X6 1858 aa2.09□□□□□ -2.08
SF3B1-205ENST00000424674 NOTCH2Q04721 2471 aa2.09□□□□□ -2.08
SF3B1-205ENST00000424674 EML5Q05BV3 1969 aa2.09□□□□□ -2.08
SF3B1-205ENST00000424674 MUC22E2RYF6 1773 aaPredicted RBP2.08□□□□□ -2.08
SF3B1-205ENST00000424674 ABCA10Q8WWZ4 1543 aa2.08□□□□□ -2.08
SF3B1-205ENST00000424674 TEX49A0A1B0GTD5 131 aa2.08□□□□□ -2.08
SF3B1-205ENST00000424674 HIGD1CA8MV81 97 aa2.08□□□□□ -2.08
SF3B1-205ENST00000424674 UMAD1C9J7I0 102 aa2.08□□□□□ -2.08
SF3B1-205ENST00000424674 EFNA4P52798 201 aa2.08□□□□□ -2.08
SF3B1-205ENST00000424674 ZNF56Q15929 161 aa2.08□□□□□ -2.08
SF3B1-205ENST00000424674 Q5VV11 94 aa2.08□□□□□ -2.08
SF3B1-205ENST00000424674 KRTAP11-1Q8IUC1 163 aa2.08□□□□□ -2.08
SF3B1-205ENST00000424674 TMEM131LA2VDJ0 1609 aa2.08□□□□□ -2.08
SF3B1-205ENST00000424674 NWD2Q9ULI1 1742 aa2.08□□□□□ -2.08
SF3B1-205ENST00000424674 SCN11AQ9UI33 1791 aa2.08□□□□□ -2.08
SF3B1-205ENST00000424674 MUC4Q99102 2169 aa2.08□□□□□ -2.08
SF3B1-205ENST00000424674 PATJQ8NI35 1801 aa2.07□□□□□ -2.08
SF3B1-205ENST00000424674 LRRC9Q6ZRR7 1453 aa2.07□□□□□ -2.08
SF3B1-205ENST00000424674 TANC1Q9C0D5 1861 aa2.07□□□□□ -2.08
SF3B1-205ENST00000424674 SETBP1Q9Y6X0 1596 aa2.07□□□□□ -2.08
SF3B1-205ENST00000424674 MROH1Q8NDA8 1641 aa2.07□□□□□ -2.08
SF3B1-205ENST00000424674 NACAE9PAV3 2078 aa2.07□□□□□ -2.08
SF3B1-205ENST00000424674 TET3O43151 1660 aa2.07□□□□□ -2.08
SF3B1-205ENST00000424674 IGKV3-7A0A075B6H7 116 aa2.07□□□□□ -2.08
SF3B1-205ENST00000424674 IGKV2-28A0A075B6P5 120 aa2.07□□□□□ -2.08
SF3B1-205ENST00000424674 A0A0G2JQZ4 141 aa2.07□□□□□ -2.08
SF3B1-205ENST00000424674 C7orf77A4D0Y5 90 aa2.07□□□□□ -2.08
SF3B1-205ENST00000424674 IGKV2D-28P01615 120 aa2.07□□□□□ -2.08
SF3B1-205ENST00000424674 SSBP1Q04837 148 aaKnown RBP2.07□□□□□ -2.08
SF3B1-205ENST00000424674 XAF1Q6GPH4 301 aa2.07□□□□□ -2.08
SF3B1-205ENST00000424674 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
SF3B1-205ENST00000424674 BPESC1Q9GZL8 116 aa2.07□□□□□ -2.08
SF3B1-205ENST00000424674 CDC42SE2Q9NRR3 84 aa2.07□□□□□ -2.08
SF3B1-205ENST00000424674 LENEPQ9Y5L5 61 aa2.07□□□□□ -2.08
SF3B1-205ENST00000424674 V9GYH0 126 aa2.07□□□□□ -2.08
SF3B1-205ENST00000424674 LTN1O94822 1766 aa2.07□□□□□ -2.08
SF3B1-205ENST00000424674 PTPRDP23468 1912 aa2.07□□□□□ -2.08
SF3B1-205ENST00000424674 CUX1P39880 1505 aa2.07□□□□□ -2.08
SF3B1-205ENST00000424674 MYO3AQ8NEV4 1616 aa2.06□□□□□ -2.08
SF3B1-205ENST00000424674 TRBV6-4A0A1B0GX49 114 aa2.06□□□□□ -2.08
SF3B1-205ENST00000424674 ZNF815PA8K554 130 aa2.06□□□□□ -2.08
SF3B1-205ENST00000424674 IGLV6-57P01721 117 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms