RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 IGHV3-30-5P0DP03 117 aa10.2□□□□□ -0.78
USB1-202ENST00000423271 CTRLP40313 264 aa10.2□□□□□ -0.78
USB1-202ENST00000423271 CACNG7P62955 275 aa10.2□□□□□ -0.78
USB1-202ENST00000423271 LELP1Q5T871 98 aa10.2□□□□□ -0.78
USB1-202ENST00000423271 ATP6V0E2Q8NHE4 81 aa10.2□□□□□ -0.78
USB1-202ENST00000423271 GTSF1Q8WW33 167 aa10.2□□□□□ -0.78
USB1-202ENST00000423271 GTSF1LQ9H1H1 148 aa10.2□□□□□ -0.78
USB1-202ENST00000423271 Q9UF83 564 aa10.2□□□□□ -0.78
USB1-202ENST00000423271 VPS13BQ7Z7G8 4022 aa10.19□□□□□ -0.78
USB1-202ENST00000423271 GAGE12JA6NER3 117 aa10.19□□□□□ -0.78
USB1-202ENST00000423271 A8MWL6 223 aa10.19□□□□□ -0.78
USB1-202ENST00000423271 GAGE1Q13065 139 aa10.19□□□□□ -0.78
USB1-202ENST00000423271 GAGE4Q13068 117 aa10.19□□□□□ -0.78
USB1-202ENST00000423271 GAGE5Q13069 117 aa10.19□□□□□ -0.78
USB1-202ENST00000423271 GAGE13Q4V321 117 aa10.19□□□□□ -0.78
USB1-202ENST00000423271 CT83Q5H943 113 aa10.19□□□□□ -0.78
USB1-202ENST00000423271 CDPF1Q6NVV7 123 aa10.19□□□□□ -0.78
USB1-202ENST00000423271 Q8N3U1 123 aa10.19□□□□□ -0.78
USB1-202ENST00000423271 C14orf178Q8N769 122 aaPredicted RBP10.19□□□□□ -0.78
USB1-202ENST00000423271 C15orf54Q8N8G6 183 aa10.19□□□□□ -0.78
USB1-202ENST00000423271 Q9HAA7 133 aa10.19□□□□□ -0.78
USB1-202ENST00000423271 IBA57-AS1B1ANH7 110 aa10.18□□□□□ -0.78
USB1-202ENST00000423271 KRTAP10-1P60331 282 aa10.18□□□□□ -0.78
USB1-202ENST00000423271 AP1S3Q96PC3 154 aa10.18□□□□□ -0.78
USB1-202ENST00000423271 V9GYV3 84 aa10.18□□□□□ -0.78
USB1-202ENST00000423271 NTF3P20783 257 aa10.17□□□□□ -0.78
USB1-202ENST00000423271 WDR73Q6P4I2 378 aa10.17□□□□□ -0.78
USB1-202ENST00000423271 OR10G8Q8NGN5 311 aa10.17□□□□□ -0.78
USB1-202ENST00000423271 PGLYRP4Q96LB8 373 aa10.17□□□□□ -0.78
USB1-202ENST00000423271 CNFNQ9BYD5 112 aa10.17□□□□□ -0.78
USB1-202ENST00000423271 KIF25-AS1Q9Y6Z4 181 aa10.17□□□□□ -0.78
USB1-202ENST00000423271 LRCOL1A6NCL2 159 aa10.16□□□□□ -0.78
USB1-202ENST00000423271 PSCAO43653 123 aa10.16□□□□□ -0.78
USB1-202ENST00000423271 ZNF56Q15929 161 aa10.16□□□□□ -0.78
USB1-202ENST00000423271 COMMD7Q86VX2 200 aa10.16□□□□□ -0.78
USB1-202ENST00000423271 TSKUQ8WUA8 353 aa10.16□□□□□ -0.78
USB1-202ENST00000423271 SMIM17P0DL12 118 aa10.15□□□□□ -0.78
USB1-202ENST00000423271 FOXA3P55318 350 aaPredicted RBP10.15□□□□□ -0.78
USB1-202ENST00000423271 XGP55808 180 aa10.15□□□□□ -0.78
USB1-202ENST00000423271 RAB4BP61018 213 aa10.15□□□□□ -0.78
USB1-202ENST00000423271 TWIST1Q15672 202 aa10.15□□□□□ -0.78
USB1-202ENST00000423271 UQCC3Q6UW78 93 aa10.15□□□□□ -0.78
USB1-202ENST00000423271 GFRA4Q9GZZ7 299 aa10.15□□□□□ -0.78
USB1-202ENST00000423271 LINC00862A6NCI5 91 aa10.14□□□□□ -0.79
USB1-202ENST00000423271 HIGD1CA8MV81 97 aa10.14□□□□□ -0.79
USB1-202ENST00000423271 F5H697 171 aa10.14□□□□□ -0.79
USB1-202ENST00000423271 MGPP08493 103 aa10.14□□□□□ -0.79
USB1-202ENST00000423271 TRGC1P0CF51 173 aa10.14□□□□□ -0.79
USB1-202ENST00000423271 FAM231BA6NCW3 169 aa10.13□□□□□ -0.79
USB1-202ENST00000423271 ADCYAP1P18509 176 aa10.13□□□□□ -0.79
USB1-202ENST00000423271 TMEM218A2RU14 115 aa10.12□□□□□ -0.79
USB1-202ENST00000423271 GCSHP23434 173 aa10.12□□□□□ -0.79
USB1-202ENST00000423271 LAGE3Q14657 143 aa10.12□□□□□ -0.79
USB1-202ENST00000423271 DAZ4Q86SG3 579 aaKnown RBP10.12□□□□□ -0.79
USB1-202ENST00000423271 NUP35Q8NFH5 326 aa10.12□□□□□ -0.79
USB1-202ENST00000423271 DPH3P1Q9H4G8 78 aa10.12□□□□□ -0.79
USB1-202ENST00000423271 DAZ3Q9NR90 486 aaKnown RBP10.12□□□□□ -0.79
USB1-202ENST00000423271 IGLV5-52A0A0A0MRZ9 124 aa10.11□□□□□ -0.79
USB1-202ENST00000423271 TRBV10-1A0A0K0K1A3 114 aa10.11□□□□□ -0.79
USB1-202ENST00000423271 PNRC1Q12796 327 aaPredicted RBP10.11□□□□□ -0.79
USB1-202ENST00000423271 SUMO4Q6EEV6 95 aa10.11□□□□□ -0.79
USB1-202ENST00000423271 BORCS7Q96B45 105 aa10.11□□□□□ -0.79
USB1-202ENST00000423271 HERC1Q15751 4861 aa10.11□□□□□ -0.79
USB1-202ENST00000423271 A0A1B0GUT8 65 aa10.1□□□□□ -0.79
USB1-202ENST00000423271 SMIM27A0A1W2PRY6 76 aa10.1□□□□□ -0.79
USB1-202ENST00000423271 F8W036 122 aa10.1□□□□□ -0.79
USB1-202ENST00000423271 HAMPP81172 84 aa10.1□□□□□ -0.79
USB1-202ENST00000423271 RPL36AP83881 106 aaKnown RBP10.1□□□□□ -0.79
USB1-202ENST00000423271 WFDC2Q14508 124 aa10.1□□□□□ -0.79
USB1-202ENST00000423271 Q8N814 137 aa10.1□□□□□ -0.79
USB1-202ENST00000423271 NEXN-AS1Q8NBZ9 246 aa10.1□□□□□ -0.79
USB1-202ENST00000423271 RPL36ALQ969Q0 106 aaKnown RBP10.1□□□□□ -0.79
USB1-202ENST00000423271 NAT8BQ9UHF3 227 aa10.1□□□□□ -0.79
USB1-202ENST00000423271 A0A087WWC5 75 aa10.09□□□□□ -0.79
USB1-202ENST00000423271 EPM2AB3EWF7 344 aa10.09□□□□□ -0.79
USB1-202ENST00000423271 TRBV7-3A0A075B6L6 115 aa10.08□□□□□ -0.8
USB1-202ENST00000423271 M0QY20 66 aa10.08□□□□□ -0.8
USB1-202ENST00000423271 PPP1R2P9O14990 202 aa10.08□□□□□ -0.8
USB1-202ENST00000423271 UBE2D3P61077 147 aa10.08□□□□□ -0.8
USB1-202ENST00000423271 UBE2D2P62837 147 aa10.08□□□□□ -0.8
USB1-202ENST00000423271 SMIM15Q7Z3B0 74 aa10.08□□□□□ -0.8
USB1-202ENST00000423271 NTN5Q8WTR8 489 aaPredicted RBP10.08□□□□□ -0.8
USB1-202ENST00000423271 DNAJC30Q96LL9 226 aa10.08□□□□□ -0.8
USB1-202ENST00000423271 SEC11CQ9BY50 192 aa10.08□□□□□ -0.8
USB1-202ENST00000423271 MYCBP2O75592 4640 aa10.07□□□□□ -0.8
USB1-202ENST00000423271 RIGQ13278 110 aa10.07□□□□□ -0.8
USB1-202ENST00000423271 NIT1Q86X76 327 aa10.07□□□□□ -0.8
USB1-202ENST00000423271 TM2D2Q9BX73 214 aa10.07□□□□□ -0.8
USB1-202ENST00000423271 TRAV8-3A0A0A6YYJ7 113 aa10.06□□□□□ -0.8
USB1-202ENST00000423271 TRAV26-2A0A0B4J265 109 aa10.06□□□□□ -0.8
USB1-202ENST00000423271 H7C1H1 209 aa10.06□□□□□ -0.8
USB1-202ENST00000423271 LECT2O14960 151 aa10.06□□□□□ -0.8
USB1-202ENST00000423271 MT-ND4LP03901 98 aa10.06□□□□□ -0.8
USB1-202ENST00000423271 Q5VSD8 79 aa10.06□□□□□ -0.8
USB1-202ENST00000423271 RASL11AQ6T310 242 aa10.06□□□□□ -0.8
USB1-202ENST00000423271 SMR3BP02814 79 aaPredicted RBP10.05□□□□□ -0.8
USB1-202ENST00000423271 GATD1Q8NB37 220 aa10.05□□□□□ -0.8
USB1-202ENST00000423271 ANAPC16Q96DE5 110 aa10.05□□□□□ -0.8
USB1-202ENST00000423271 TMEM191AQ9H0A3 160 aa10.05□□□□□ -0.8
USB1-202ENST00000423271 URGCP-MRPS24S4R325 110 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms