RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 PRAC2D3DTV9 90 aa8.14□□□□□ -1.11
PTCH1-206ENST00000421141 ASPHD1Q5U4P2 390 aa8.14□□□□□ -1.11
PTCH1-206ENST00000421141 MORN5Q5VZ52 161 aa8.14□□□□□ -1.11
PTCH1-206ENST00000421141 K7EQG2 157 aa8.13□□□□□ -1.11
PTCH1-206ENST00000421141 NPYP01303 97 aa8.13□□□□□ -1.11
PTCH1-206ENST00000421141 FAM222AQ5U5X8 452 aa8.13□□□□□ -1.11
PTCH1-206ENST00000421141 RPL39LQ96EH5 51 aaKnown RBP8.13□□□□□ -1.11
PTCH1-206ENST00000421141 TRAV13-2A0A0B4J235 113 aa8.13□□□□□ -1.11
PTCH1-206ENST00000421141 FAM110AQ9BQ89 295 aa8.13□□□□□ -1.11
PTCH1-206ENST00000421141 NDUFA12Q9UI09 145 aa8.13□□□□□ -1.11
PTCH1-206ENST00000421141 MDFICQ9P1T7 246 aa8.13□□□□□ -1.11
PTCH1-206ENST00000421141 BRCA2P51587 3418 aa8.12□□□□□ -1.11
PTCH1-206ENST00000421141 TRBV10-1A0A0K0K1A3 114 aa8.12□□□□□ -1.11
PTCH1-206ENST00000421141 HERV-K104P63124 156 aa8.12□□□□□ -1.11
PTCH1-206ENST00000421141 COX11Q9Y6N1 276 aa8.12□□□□□ -1.11
PTCH1-206ENST00000421141 C5orf38Q86SI9 138 aa8.12□□□□□ -1.11
PTCH1-206ENST00000421141 KLK12Q9UKR0 248 aa8.12□□□□□ -1.11
PTCH1-206ENST00000421141 MUC4Q99102 2169 aa8.12□□□□□ -1.11
PTCH1-206ENST00000421141 KIR2DL5BA0A0G2JN68 375 aa8.12□□□□□ -1.11
PTCH1-206ENST00000421141 KIR2DL5BA0A0G2JPC4 375 aa8.12□□□□□ -1.11
PTCH1-206ENST00000421141 C3orf79P0CE67 100 aa8.12□□□□□ -1.11
PTCH1-206ENST00000421141 KIR2DL5AQ8N109 375 aa8.12□□□□□ -1.11
PTCH1-206ENST00000421141 KIR2DL5BQ8NHK3 375 aa8.12□□□□□ -1.11
PTCH1-206ENST00000421141 H3BUT2 72 aa8.12□□□□□ -1.11
PTCH1-206ENST00000421141 TRAV10A0A0B4J240 114 aa8.11□□□□□ -1.11
PTCH1-206ENST00000421141 LGALS9BQ3B8N2 356 aa8.11□□□□□ -1.11
PTCH1-206ENST00000421141 SAMD5Q5TGI4 173 aa8.11□□□□□ -1.11
PTCH1-206ENST00000421141 A0A1B0GV72 72 aa8.11□□□□□ -1.11
PTCH1-206ENST00000421141 C10orf99Q6UWK7 81 aa8.11□□□□□ -1.11
PTCH1-206ENST00000421141 LINC00482Q8N8I6 264 aa8.11□□□□□ -1.11
PTCH1-206ENST00000421141 Q8N6K4 173 aa8.11□□□□□ -1.11
PTCH1-206ENST00000421141 VSIG2Q96IQ7 327 aa8.11□□□□□ -1.11
PTCH1-206ENST00000421141 ZNF479Q96JC4 524 aa8.11□□□□□ -1.11
PTCH1-206ENST00000421141 SCRT2Q9NQ03 307 aa8.11□□□□□ -1.11
PTCH1-206ENST00000421141 UTF1Q5T230 341 aa8.11□□□□□ -1.11
PTCH1-206ENST00000421141 TRAV8-2A0A0B4J237 113 aa8.1□□□□□ -1.11
PTCH1-206ENST00000421141 P0C879 139 aa8.1□□□□□ -1.11
PTCH1-206ENST00000421141 CRYGDP07320 174 aa8.1□□□□□ -1.11
PTCH1-206ENST00000421141 DEFB1P60022 68 aa8.1□□□□□ -1.11
PTCH1-206ENST00000421141 EIF4EBP1Q13541 118 aaPredicted RBP8.1□□□□□ -1.11
PTCH1-206ENST00000421141 TAL2Q16559 108 aa8.1□□□□□ -1.11
PTCH1-206ENST00000421141 STPG4Q8N801 248 aa8.1□□□□□ -1.11
PTCH1-206ENST00000421141 TRAV8-3A0A0A6YYJ7 113 aa8.1□□□□□ -1.11
PTCH1-206ENST00000421141 NDUFA1O15239 70 aa8.1□□□□□ -1.11
PTCH1-206ENST00000421141 IGKV1D-37A0A075B6S9 117 aa8.1□□□□□ -1.11
PTCH1-206ENST00000421141 TRBV6-1A0A0K0K1D8 114 aa8.1□□□□□ -1.11
PTCH1-206ENST00000421141 ADCYAP1P18509 176 aa8.1□□□□□ -1.11
PTCH1-206ENST00000421141 GAGE2EQ4V326 116 aa8.1□□□□□ -1.11
PTCH1-206ENST00000421141 GAGE2DQ9UEU5 116 aa8.1□□□□□ -1.11
PTCH1-206ENST00000421141 C9JQL5 133 aa8.1□□□□□ -1.11
PTCH1-206ENST00000421141 PROP1O75360 226 aa8.1□□□□□ -1.11
PTCH1-206ENST00000421141 IGLV1-40P01703 118 aa8.09□□□□□ -1.11
PTCH1-206ENST00000421141 LAMA3Q16787 3333 aa8.09□□□□□ -1.11
PTCH1-206ENST00000421141 C16orf95Q9H693 158 aa8.09□□□□□ -1.11
PTCH1-206ENST00000421141 FGF6P10767 208 aa8.09□□□□□ -1.11
PTCH1-206ENST00000421141 ZNF664Q8N3J9 261 aa8.09□□□□□ -1.11
PTCH1-206ENST00000421141 AVPP01185 164 aa8.09□□□□□ -1.12
PTCH1-206ENST00000421141 NFE4Q86UQ8 179 aa8.09□□□□□ -1.12
PTCH1-206ENST00000421141 TRANK1O15050 2925 aa8.08□□□□□ -1.12
PTCH1-206ENST00000421141 RANBP2P49792 3224 aaKnown RBP8.08□□□□□ -1.12
PTCH1-206ENST00000421141 LGALS9CQ6DKI2 356 aa8.08□□□□□ -1.12
PTCH1-206ENST00000421141 MRPL35Q9NZE8 188 aaKnown RBP8.08□□□□□ -1.12
PTCH1-206ENST00000421141 C4orf48Q5BLP8 95 aa8.08□□□□□ -1.12
PTCH1-206ENST00000421141 HTTP42858 3142 aa8.08□□□□□ -1.12
PTCH1-206ENST00000421141 CTRLP40313 264 aa8.08□□□□□ -1.12
PTCH1-206ENST00000421141 C18orf65Q6ZTR6 163 aa8.08□□□□□ -1.12
PTCH1-206ENST00000421141 ZFAND3Q9H8U3 227 aa8.08□□□□□ -1.12
PTCH1-206ENST00000421141 CXCL5P42830 114 aa8.08□□□□□ -1.12
PTCH1-206ENST00000421141 OXLD1Q5BKU9 147 aa8.08□□□□□ -1.12
PTCH1-206ENST00000421141 J3QQQ9 107 aa8.08□□□□□ -1.12
PTCH1-206ENST00000421141 RPL32P62910 135 aaKnown RBP8.08□□□□□ -1.12
PTCH1-206ENST00000421141 CRIP3Q6Q6R5 217 aa8.08□□□□□ -1.12
PTCH1-206ENST00000421141 C1orf229Q6ZS94 237 aaPredicted RBP8.08□□□□□ -1.12
PTCH1-206ENST00000421141 LYPD6BQ8NI32 183 aa8.07□□□□□ -1.12
PTCH1-206ENST00000421141 GTSF1LQ9H1H1 148 aa8.07□□□□□ -1.12
PTCH1-206ENST00000421141 ETDCA0A1B0GVM5 59 aa8.07□□□□□ -1.12
PTCH1-206ENST00000421141 HIST2H2BDQ6DRA6 164 aa8.07□□□□□ -1.12
PTCH1-206ENST00000421141 Q9H8V8 135 aa8.07□□□□□ -1.12
PTCH1-206ENST00000421141 Q6ZS46 218 aa8.06□□□□□ -1.12
PTCH1-206ENST00000421141 COX7B2Q8TF08 81 aa8.06□□□□□ -1.12
PTCH1-206ENST00000421141 NUPR2A6NF83 97 aa8.06□□□□□ -1.12
PTCH1-206ENST00000421141 C2orf82Q6UX34 121 aa8.06□□□□□ -1.12
PTCH1-206ENST00000421141 ZFP2Q6ZN57 461 aa8.06□□□□□ -1.12
PTCH1-206ENST00000421141 BOD1L2Q8IYS8 172 aa8.06□□□□□ -1.12
PTCH1-206ENST00000421141 TRAV8-4A0A0B4J246 113 aa8.06□□□□□ -1.12
PTCH1-206ENST00000421141 P0DMU3 169 aa8.06□□□□□ -1.12
PTCH1-206ENST00000421141 FAM231AP0DMU4 169 aa8.06□□□□□ -1.12
PTCH1-206ENST00000421141 FAM231CP0DMU5 169 aa8.06□□□□□ -1.12
PTCH1-206ENST00000421141 DSCR8Q96T75 97 aa8.06□□□□□ -1.12
PTCH1-206ENST00000421141 A0A1W2PPR1 153 aa8.06□□□□□ -1.12
PTCH1-206ENST00000421141 Q6ZPA2 131 aa8.06□□□□□ -1.12
PTCH1-206ENST00000421141 Q6ZTI0 123 aa8.06□□□□□ -1.12
PTCH1-206ENST00000421141 UBE2AP49459 152 aa8.05□□□□□ -1.12
PTCH1-206ENST00000421141 PRSS47A8MTI9 375 aa8.05□□□□□ -1.12
PTCH1-206ENST00000421141 GAGE2BQ13066 116 aa8.05□□□□□ -1.12
PTCH1-206ENST00000421141 ZNF124Q15973 351 aa8.05□□□□□ -1.12
PTCH1-206ENST00000421141 LY6G6CO95867 125 aa8.05□□□□□ -1.12
PTCH1-206ENST00000421141 C10orf91Q5T1B1 145 aa8.05□□□□□ -1.12
PTCH1-206ENST00000421141 C20orf173Q96LM9 149 aa8.05□□□□□ -1.12
PTCH1-206ENST00000421141 BRWD1-AS2P59051 145 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms