RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 RETNLBQ9BQ08 111 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 PROK2Q9HC23 129 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 DOCK1Q14185 1865 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 NFAT5O94916 1531 aa2.48□□□□□ -2.01
HMGB1P13-201ENST00000406019 NEXMIFQ5QGS0 1516 aa2.48□□□□□ -2.01
HMGB1P13-201ENST00000406019 TRPM7Q96QT4 1865 aa2.48□□□□□ -2.01
HMGB1P13-201ENST00000406019 CLTCQ00610 1675 aaKnown RBP2.48□□□□□ -2.01
HMGB1P13-201ENST00000406019 USP54Q70EL1 1684 aa2.48□□□□□ -2.01
HMGB1P13-201ENST00000406019 PREX1Q8TCU6 1659 aa2.48□□□□□ -2.01
HMGB1P13-201ENST00000406019 ARFGEF1Q9Y6D6 1849 aa2.48□□□□□ -2.01
HMGB1P13-201ENST00000406019 IGKV2-24A0A0C4DH68 120 aa2.48□□□□□ -2.01
HMGB1P13-201ENST00000406019 DEFA4P12838 97 aa2.48□□□□□ -2.01
HMGB1P13-201ENST00000406019 ZNF56Q15929 161 aa2.48□□□□□ -2.01
HMGB1P13-201ENST00000406019 C12orf73Q69YU5 71 aa2.48□□□□□ -2.01
HMGB1P13-201ENST00000406019 SMIM5Q71RC9 77 aa2.48□□□□□ -2.01
HMGB1P13-201ENST00000406019 LINC00269Q8N2A0 174 aa2.48□□□□□ -2.01
HMGB1P13-201ENST00000406019 PFN4Q8NHR9 129 aa2.48□□□□□ -2.01
HMGB1P13-201ENST00000406019 CHCHD1Q96BP2 118 aaKnown RBP2.48□□□□□ -2.01
HMGB1P13-201ENST00000406019 FAM103A1Q9BTL3 118 aaKnown RBP2.48□□□□□ -2.01
HMGB1P13-201ENST00000406019 NDUFA12Q9UI09 145 aa2.48□□□□□ -2.01
HMGB1P13-201ENST00000406019 CLTCL1P53675 1640 aa2.48□□□□□ -2.01
HMGB1P13-201ENST00000406019 ALKQ9UM73 1620 aa2.48□□□□□ -2.01
HMGB1P13-201ENST00000406019 SCN8AQ9UQD0 1980 aa2.48□□□□□ -2.01
HMGB1P13-201ENST00000406019 STRCP1A6NGW2 1772 aa2.48□□□□□ -2.01
HMGB1P13-201ENST00000406019 SAMD9Q5K651 1589 aa2.48□□□□□ -2.01
HMGB1P13-201ENST00000406019 MROH2BQ7Z745 1585 aa2.48□□□□□ -2.01
HMGB1P13-201ENST00000406019 TRPM2O94759 1503 aa2.47□□□□□ -2.01
HMGB1P13-201ENST00000406019 ALS2Q96Q42 1657 aa2.47□□□□□ -2.01
HMGB1P13-201ENST00000406019 MYO9BQ13459 2157 aa2.47□□□□□ -2.01
HMGB1P13-201ENST00000406019 IGLV10-54A0A075B6I4 117 aa2.47□□□□□ -2.01
HMGB1P13-201ENST00000406019 IGHV3-15A0A0B4J1V0 119 aa2.47□□□□□ -2.01
HMGB1P13-201ENST00000406019 IGHV1-24A0A0C4DH33 117 aa2.47□□□□□ -2.01
HMGB1P13-201ENST00000406019 LOC107984156A0A0G2JMH3 177 aa2.47□□□□□ -2.01
HMGB1P13-201ENST00000406019 A0A1B0GW54 56 aa2.47□□□□□ -2.01
HMGB1P13-201ENST00000406019 C5orf67F2Z3F1 127 aa2.47□□□□□ -2.01
HMGB1P13-201ENST00000406019 C19orf84I3L1E1 186 aa2.47□□□□□ -2.01
HMGB1P13-201ENST00000406019 GNRH2O43555 120 aa2.47□□□□□ -2.01
HMGB1P13-201ENST00000406019 IGHV1-69P01742 117 aa2.47□□□□□ -2.01
HMGB1P13-201ENST00000406019 P0C880 135 aa2.47□□□□□ -2.01
HMGB1P13-201ENST00000406019 SAA1P0DJI8 122 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P13-201ENST00000406019 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P13-201ENST00000406019 CYP2G1PQ6ZSU1 146 aa2.47□□□□□ -2.01
HMGB1P13-201ENST00000406019 ARL17AQ8IVW1 177 aa2.47□□□□□ -2.01
HMGB1P13-201ENST00000406019 Q8N814 137 aa2.47□□□□□ -2.01
HMGB1P13-201ENST00000406019 CNEP1R1Q8N9A8 125 aa2.47□□□□□ -2.01
HMGB1P13-201ENST00000406019 MRPL35Q9NZE8 188 aaKnown RBP2.47□□□□□ -2.01
HMGB1P13-201ENST00000406019 OBSL1O75147 1896 aa2.47□□□□□ -2.01
HMGB1P13-201ENST00000406019 KCPQ6ZWJ8 1503 aa2.47□□□□□ -2.01
HMGB1P13-201ENST00000406019 COL4A6Q14031 1691 aa2.47□□□□□ -2.01
HMGB1P13-201ENST00000406019 SDK2Q58EX2 2172 aa2.46□□□□□ -2.02
HMGB1P13-201ENST00000406019 NYNRINQ9P2P1 1898 aaKnown RBP2.46□□□□□ -2.02
HMGB1P13-201ENST00000406019 MYO5AQ9Y4I1 1855 aaKnown RBP2.46□□□□□ -2.02
HMGB1P13-201ENST00000406019 E7EUB6 86 aa2.46□□□□□ -2.02
HMGB1P13-201ENST00000406019 FXYD1O00168 92 aa2.46□□□□□ -2.02
HMGB1P13-201ENST00000406019 TFF1P04155 84 aa2.46□□□□□ -2.02
HMGB1P13-201ENST00000406019 CXCL8P10145 99 aa2.46□□□□□ -2.02
HMGB1P13-201ENST00000406019 RPL27AP46776 148 aaKnown RBP2.46□□□□□ -2.02
HMGB1P13-201ENST00000406019 FXYD2P54710 66 aa2.46□□□□□ -2.02
HMGB1P13-201ENST00000406019 ESRGQ1W209 222 aa2.46□□□□□ -2.02
HMGB1P13-201ENST00000406019 SCGB3A1Q96QR1 104 aa2.46□□□□□ -2.02
HMGB1P13-201ENST00000406019 EXPH5Q8NEV8 1989 aa2.45□□□□□ -2.02
HMGB1P13-201ENST00000406019 PTPRDP23468 1912 aa2.45□□□□□ -2.02
HMGB1P13-201ENST00000406019 TRBV6-7A0A0A0MS04 114 aa2.45□□□□□ -2.02
HMGB1P13-201ENST00000406019 TRBV7-1A0A0A6YYK4 115 aa2.45□□□□□ -2.02
HMGB1P13-201ENST00000406019 TRAV13-2A0A0B4J235 113 aa2.45□□□□□ -2.02
HMGB1P13-201ENST00000406019 TRAV3A0A0B4J244 114 aa2.45□□□□□ -2.02
HMGB1P13-201ENST00000406019 TCRBV4S1A1TA0A5B7 111 aa2.45□□□□□ -2.02
HMGB1P13-201ENST00000406019 C2orf70A6NJV1 201 aa2.45□□□□□ -2.02
HMGB1P13-201ENST00000406019 FAM223BA6NKX1 122 aa2.45□□□□□ -2.02
HMGB1P13-201ENST00000406019 XCL1P47992 114 aa2.45□□□□□ -2.02
HMGB1P13-201ENST00000406019 TMEM170BQ5T4T1 132 aa2.45□□□□□ -2.02
HMGB1P13-201ENST00000406019 SFTA2Q6UW10 78 aa2.45□□□□□ -2.02
HMGB1P13-201ENST00000406019 LINC00643Q86TS7 51 aa2.45□□□□□ -2.02
HMGB1P13-201ENST00000406019 BAGE3Q86Y29 109 aa2.45□□□□□ -2.02
HMGB1P13-201ENST00000406019 BAGE2Q86Y30 109 aa2.45□□□□□ -2.02
HMGB1P13-201ENST00000406019 Q8NDZ9 215 aa2.45□□□□□ -2.02
HMGB1P13-201ENST00000406019 SMCR5Q8TEV8 140 aa2.45□□□□□ -2.02
HMGB1P13-201ENST00000406019 ARL2-SNX15V9GYD0 113 aa2.45□□□□□ -2.02
HMGB1P13-201ENST00000406019 CICQ96RK0 1608 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P13-201ENST00000406019 PTPRBP23467 1997 aa2.45□□□□□ -2.02
HMGB1P13-201ENST00000406019 LTBP2Q14767 1821 aa2.45□□□□□ -2.02
HMGB1P13-201ENST00000406019 CEP170BQ9Y4F5 1589 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P13-201ENST00000406019 ADAMTS7Q9UKP4 1686 aa2.44□□□□□ -2.02
HMGB1P13-201ENST00000406019 RGPD8O14715 1765 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P13-201ENST00000406019 ANKRD36CQ5JPF3 1778 aa2.44□□□□□ -2.02
HMGB1P13-201ENST00000406019 RGPD5Q99666 1765 aa2.44□□□□□ -2.02
HMGB1P13-201ENST00000406019 PDCD11Q14690 1871 aaKnown RBP2.44□□□□□ -2.02
HMGB1P13-201ENST00000406019 PAPPAQ13219 1627 aa2.44□□□□□ -2.02
HMGB1P13-201ENST00000406019 TMSB15BA0A087X1C1 80 aa2.44□□□□□ -2.02
HMGB1P13-201ENST00000406019 C10orf142B7Z368 130 aa2.44□□□□□ -2.02
HMGB1P13-201ENST00000406019 PIPP12273 146 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P13-201ENST00000406019 GCHFRP30047 84 aa2.44□□□□□ -2.02
HMGB1P13-201ENST00000406019 DEFB121Q5J5C9 76 aa2.44□□□□□ -2.02
HMGB1P13-201ENST00000406019 C1orf134Q5TEV5 83 aa2.44□□□□□ -2.02
HMGB1P13-201ENST00000406019 NCBP2-AS2Q69YL0 99 aa2.44□□□□□ -2.02
HMGB1P13-201ENST00000406019 SPTSSBQ8NFR3 76 aa2.44□□□□□ -2.02
HMGB1P13-201ENST00000406019 PLXNB1O43157 2135 aa2.44□□□□□ -2.02
HMGB1P13-201ENST00000406019 ZFC3H1O60293 1989 aaKnown RBP2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 TANC2Q9HCD6 1990 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 ZNF236Q9UL36 1845 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms