RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 ZNF575Q86XF7 245 aa4.34□□□□□ -1.72
CASC3-202ENST00000394114 ZFAND2AQ8N6M9 145 aa4.34□□□□□ -1.72
CASC3-202ENST00000394114 GFRA4Q9GZZ7 299 aa4.34□□□□□ -1.72
CASC3-202ENST00000394114 DNHD1Q96M86 4753 aa4.34□□□□□ -1.72
CASC3-202ENST00000394114 TRAV12-2A0A075B6T6 113 aa4.33□□□□□ -1.72
CASC3-202ENST00000394114 KNCNA6PVL3 124 aa4.33□□□□□ -1.72
CASC3-202ENST00000394114 M0R2Z0 102 aa4.33□□□□□ -1.72
CASC3-202ENST00000394114 NUPR1O60356 82 aa4.33□□□□□ -1.72
CASC3-202ENST00000394114 CRLF1O75462 422 aa4.33□□□□□ -1.72
CASC3-202ENST00000394114 ATP5LO75964 103 aa4.33□□□□□ -1.72
CASC3-202ENST00000394114 MT-ND6P03923 174 aa4.33□□□□□ -1.72
CASC3-202ENST00000394114 FXYD7P58549 80 aa4.33□□□□□ -1.72
CASC3-202ENST00000394114 DEFB131AP59861 70 aa4.33□□□□□ -1.72
CASC3-202ENST00000394114 HSD52Q0P140 79 aa4.33□□□□□ -1.72
CASC3-202ENST00000394114 C4orf26Q17RF5 130 aa4.33□□□□□ -1.72
CASC3-202ENST00000394114 KRTAP21-3Q3LHN1 58 aa4.33□□□□□ -1.72
CASC3-202ENST00000394114 SPINK13Q1W4C9 94 aa4.33□□□□□ -1.72
CASC3-202ENST00000394114 BAGE3Q86Y29 109 aa4.33□□□□□ -1.72
CASC3-202ENST00000394114 TRAV12-3A0A0B4J271 114 aa4.32□□□□□ -1.72
CASC3-202ENST00000394114 A0A0J9YX75 114 aa4.32□□□□□ -1.72
CASC3-202ENST00000394114 LOC107984640A0A0U1RRK4 108 aa4.32□□□□□ -1.72
CASC3-202ENST00000394114 FAM231BA6NCW3 169 aa4.32□□□□□ -1.72
CASC3-202ENST00000394114 HINT1P49773 126 aaPredicted RBP4.32□□□□□ -1.72
CASC3-202ENST00000394114 TWIST1Q15672 202 aa4.32□□□□□ -1.72
CASC3-202ENST00000394114 DEFB114Q30KQ6 69 aa4.32□□□□□ -1.72
CASC3-202ENST00000394114 AMMECR1LQ6DCA0 310 aa4.32□□□□□ -1.72
CASC3-202ENST00000394114 EBLN2Q6P2I7 272 aa4.32□□□□□ -1.72
CASC3-202ENST00000394114 ATP5L2Q7Z4Y8 100 aa4.32□□□□□ -1.72
CASC3-202ENST00000394114 BORCS7Q96B45 105 aa4.32□□□□□ -1.72
CASC3-202ENST00000394114 TP53TG3Q9ULZ0 132 aa4.32□□□□□ -1.72
CASC3-202ENST00000394114 NBEAL2Q6ZNJ1 2754 aa4.32□□□□□ -1.72
CASC3-202ENST00000394114 MUC4Q99102 2169 aa4.32□□□□□ -1.72
CASC3-202ENST00000394114 IGLV9-49A0A0B4J1Y8 123 aa4.32□□□□□ -1.72
CASC3-202ENST00000394114 H3BVH4 76 aa4.32□□□□□ -1.72
CASC3-202ENST00000394114 SERF1AO75920 110 aa4.32□□□□□ -1.72
CASC3-202ENST00000394114 GATA1P15976 413 aaPredicted RBP4.32□□□□□ -1.72
CASC3-202ENST00000394114 FAM19A5Q7Z5A7 132 aaPredicted RBP4.32□□□□□ -1.72
CASC3-202ENST00000394114 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.32□□□□□ -1.72
CASC3-202ENST00000394114 GNRH2O43555 120 aa4.31□□□□□ -1.72
CASC3-202ENST00000394114 IGLC6P0CF74 106 aa4.31□□□□□ -1.72
CASC3-202ENST00000394114 RASL11AQ6T310 242 aa4.31□□□□□ -1.72
CASC3-202ENST00000394114 FA2HQ7L5A8 372 aa4.31□□□□□ -1.72
CASC3-202ENST00000394114 OR10AG1Q8NH19 301 aa4.31□□□□□ -1.72
CASC3-202ENST00000394114 OVOL2Q9BRP0 275 aa4.31□□□□□ -1.72
CASC3-202ENST00000394114 Q9HAA7 133 aa4.31□□□□□ -1.72
CASC3-202ENST00000394114 MGAM2Q2M2H8 2515 aa4.31□□□□□ -1.72
CASC3-202ENST00000394114 IGLV5-52A0A0A0MRZ9 124 aa4.31□□□□□ -1.72
CASC3-202ENST00000394114 TRAV21A0A0B4J279 112 aa4.31□□□□□ -1.72
CASC3-202ENST00000394114 COA6Q5JTJ3 125 aaKnown RBP4.31□□□□□ -1.72
CASC3-202ENST00000394114 AMN1Q8IY45 258 aa4.31□□□□□ -1.72
CASC3-202ENST00000394114 FAM19A4Q96LR4 140 aa4.31□□□□□ -1.72
CASC3-202ENST00000394114 LENEPQ9Y5L5 61 aa4.31□□□□□ -1.72
CASC3-202ENST00000394114 NBEAL1Q6ZS30 2694 aa4.31□□□□□ -1.72
CASC3-202ENST00000394114 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.31□□□□□ -1.72
CASC3-202ENST00000394114 HTN1P15515 57 aa4.31□□□□□ -1.72
CASC3-202ENST00000394114 S100A4P26447 101 aaKnown RBP4.31□□□□□ -1.72
CASC3-202ENST00000394114 CTRLP40313 264 aa4.31□□□□□ -1.72
CASC3-202ENST00000394114 EMP1P54849 157 aa4.31□□□□□ -1.72
CASC3-202ENST00000394114 Q6AWC8 147 aa4.31□□□□□ -1.72
CASC3-202ENST00000394114 OR13C6PQ8NH95 151 aa4.31□□□□□ -1.72
CASC3-202ENST00000394114 C18orf32Q8TCD1 76 aa4.31□□□□□ -1.72
CASC3-202ENST00000394114 OR4C46A6NHA9 309 aa4.3□□□□□ -1.72
CASC3-202ENST00000394114 KLLNB2CW77 178 aa4.3□□□□□ -1.72
CASC3-202ENST00000394114 SMKR1H3BMG3 65 aa4.3□□□□□ -1.72
CASC3-202ENST00000394114 M0R381 172 aa4.3□□□□□ -1.72
CASC3-202ENST00000394114 FOXI2Q6ZQN5 318 aa4.3□□□□□ -1.72
CASC3-202ENST00000394114 FAM19A2Q8N3H0 131 aa4.3□□□□□ -1.72
CASC3-202ENST00000394114 SPATA3Q8NHX4 192 aa4.3□□□□□ -1.72
CASC3-202ENST00000394114 ZNF256Q9Y2P7 627 aaPredicted RBP4.3□□□□□ -1.72
CASC3-202ENST00000394114 RBMY1BA6NDE4 496 aaKnown RBP4.3□□□□□ -1.72
CASC3-202ENST00000394114 RBMY1EA6NEQ0 496 aaKnown RBP4.3□□□□□ -1.72
CASC3-202ENST00000394114 HSBP1O75506 76 aa4.3□□□□□ -1.72
CASC3-202ENST00000394114 NCR2O95944 276 aa4.3□□□□□ -1.72
CASC3-202ENST00000394114 PRM2P04554 102 aa4.3□□□□□ -1.72
CASC3-202ENST00000394114 RBMY1DP0C7P1 496 aaKnown RBP4.3□□□□□ -1.72
CASC3-202ENST00000394114 EVI2AP22794 236 aa4.3□□□□□ -1.72
CASC3-202ENST00000394114 XGP55808 180 aa4.3□□□□□ -1.72
CASC3-202ENST00000394114 SPANXN1Q5VSR9 72 aa4.3□□□□□ -1.72
CASC3-202ENST00000394114 WFDC10AQ9H1F0 79 aa4.3□□□□□ -1.72
CASC3-202ENST00000394114 C7orf71A4D174 169 aa4.29□□□□□ -1.72
CASC3-202ENST00000394114 D6R8Y8 96 aa4.29□□□□□ -1.72
CASC3-202ENST00000394114 CCDC179H3BU77 68 aa4.29□□□□□ -1.72
CASC3-202ENST00000394114 GAS8-AS1O95177 125 aa4.29□□□□□ -1.72
CASC3-202ENST00000394114 CD7P09564 240 aa4.29□□□□□ -1.72
CASC3-202ENST00000394114 TCTAP57738 103 aa4.29□□□□□ -1.72
CASC3-202ENST00000394114 AMTNQ6UX39 209 aa4.29□□□□□ -1.72
CASC3-202ENST00000394114 MPLKIPQ8TAP9 179 aa4.29□□□□□ -1.72
CASC3-202ENST00000394114 DNAJC30Q96LL9 226 aa4.29□□□□□ -1.72
CASC3-202ENST00000394114 SAMD10Q9BYL1 202 aa4.29□□□□□ -1.72
CASC3-202ENST00000394114 H3BMM0 161 aa4.29□□□□□ -1.72
CASC3-202ENST00000394114 DUSP14O95147 198 aaKnown RBP4.29□□□□□ -1.72
CASC3-202ENST00000394114 RBMY1A1P0DJD3 496 aaKnown RBP4.29□□□□□ -1.72
CASC3-202ENST00000394114 RBMY1CP0DJD4 496 aa4.29□□□□□ -1.72
CASC3-202ENST00000394114 HLA-DRB4P13762 266 aa4.29□□□□□ -1.72
CASC3-202ENST00000394114 LEPP41159 167 aa4.29□□□□□ -1.72
CASC3-202ENST00000394114 ASIPP42127 132 aa4.29□□□□□ -1.72
CASC3-202ENST00000394114 HNRNPA3P51991 378 aaKnown RBP4.29□□□□□ -1.72
CASC3-202ENST00000394114 Q0VG73 95 aa4.29□□□□□ -1.72
CASC3-202ENST00000394114 LAGE3Q14657 143 aa4.29□□□□□ -1.72
CASC3-202ENST00000394114 RBMY1FQ15415 496 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms