RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 ARL17AQ8IVW1 177 aa10.65□□□□□ -0.7
CLCN4-201ENST00000380829 ESM1Q9NQ30 184 aa10.65□□□□□ -0.7
CLCN4-201ENST00000380829 YAE1D1Q9NRH1 226 aa10.65□□□□□ -0.7
CLCN4-201ENST00000380829 GAGE5Q13069 117 aa10.65□□□□□ -0.71
CLCN4-201ENST00000380829 GAGE6Q13070 117 aa10.65□□□□□ -0.71
CLCN4-201ENST00000380829 TMEM86BQ8N661 226 aa10.65□□□□□ -0.71
CLCN4-201ENST00000380829 ATP6V0E2Q8NHE4 81 aa10.65□□□□□ -0.71
CLCN4-201ENST00000380829 DLX4Q92988 240 aaPredicted RBP10.65□□□□□ -0.71
CLCN4-201ENST00000380829 MTORP42345 2549 aa10.64□□□□□ -0.71
CLCN4-201ENST00000380829 TNFRSF6BO95407 300 aa10.64□□□□□ -0.71
CLCN4-201ENST00000380829 TAL2Q16559 108 aa10.64□□□□□ -0.71
CLCN4-201ENST00000380829 TEX29Q8N6K0 151 aa10.64□□□□□ -0.71
CLCN4-201ENST00000380829 HERV-K104P63124 156 aa10.64□□□□□ -0.71
CLCN4-201ENST00000380829 LINC01549A6NIU2 74 aa10.63□□□□□ -0.71
CLCN4-201ENST00000380829 IGKV3-20P01619 116 aa10.63□□□□□ -0.71
CLCN4-201ENST00000380829 SPANXN1Q5VSR9 72 aa10.63□□□□□ -0.71
CLCN4-201ENST00000380829 FAM110AQ9BQ89 295 aa10.63□□□□□ -0.71
CLCN4-201ENST00000380829 ANK3Q12955 4377 aaKnown RBP10.63□□□□□ -0.71
CLCN4-201ENST00000380829 K7EQG2 157 aa10.63□□□□□ -0.71
CLCN4-201ENST00000380829 HLA-DRB4P13762 266 aa10.63□□□□□ -0.71
CLCN4-201ENST00000380829 SNRPD3P62318 126 aaKnown RBP10.63□□□□□ -0.71
CLCN4-201ENST00000380829 HLA-DRB4X5D2U9 266 aa10.63□□□□□ -0.71
CLCN4-201ENST00000380829 ATP5LO75964 103 aa10.62□□□□□ -0.71
CLCN4-201ENST00000380829 NHLRC4P0CG21 123 aaPredicted RBP10.62□□□□□ -0.71
CLCN4-201ENST00000380829 APRG1Q8IVJ8 170 aa10.62□□□□□ -0.71
CLCN4-201ENST00000380829 C11orf44Q8N8P7 122 aa10.62□□□□□ -0.71
CLCN4-201ENST00000380829 TRBV7-9A0A0J9YWB2 115 aa10.62□□□□□ -0.71
CLCN4-201ENST00000380829 LINC01619G3V211 115 aa10.62□□□□□ -0.71
CLCN4-201ENST00000380829 GNRH2O43555 120 aa10.62□□□□□ -0.71
CLCN4-201ENST00000380829 S100A4P26447 101 aaKnown RBP10.62□□□□□ -0.71
CLCN4-201ENST00000380829 KLHL30-AS1Q8NEE0 82 aa10.62□□□□□ -0.71
CLCN4-201ENST00000380829 C4orf3Q8WVX3 66 aa10.62□□□□□ -0.71
CLCN4-201ENST00000380829 KLLNB2CW77 178 aa10.61□□□□□ -0.71
CLCN4-201ENST00000380829 ZFAND6Q6FIF0 208 aa10.61□□□□□ -0.71
CLCN4-201ENST00000380829 SORL1Q92673 2214 aa10.61□□□□□ -0.71
CLCN4-201ENST00000380829 M0R381 172 aa10.6□□□□□ -0.71
CLCN4-201ENST00000380829 ASIPP42127 132 aa10.6□□□□□ -0.71
CLCN4-201ENST00000380829 SMIM20Q8N5G0 67 aa10.6□□□□□ -0.71
CLCN4-201ENST00000380829 PPDPFLQ8WWR9 84 aa10.6□□□□□ -0.71
CLCN4-201ENST00000380829 NXT2Q9NPJ8 142 aaKnown RBP10.6□□□□□ -0.71
CLCN4-201ENST00000380829 TRBV20-1A0A075B6N2 111 aa10.6□□□□□ -0.71
CLCN4-201ENST00000380829 TRAV26-2A0A0B4J265 109 aa10.6□□□□□ -0.71
CLCN4-201ENST00000380829 LINC01546A6NGU7 62 aa10.6□□□□□ -0.71
CLCN4-201ENST00000380829 TEN1Q86WV5 123 aa10.6□□□□□ -0.71
CLCN4-201ENST00000380829 TRAV12-3A0A0B4J271 114 aa10.59□□□□□ -0.71
CLCN4-201ENST00000380829 A0A0J9YX75 114 aa10.59□□□□□ -0.71
CLCN4-201ENST00000380829 IGHV4-4A0A075B6R2 117 aa10.59□□□□□ -0.71
CLCN4-201ENST00000380829 TRAV12-2A0A075B6T6 113 aa10.59□□□□□ -0.71
CLCN4-201ENST00000380829 MYMXA0A1B0GTQ4 84 aa10.59□□□□□ -0.71
CLCN4-201ENST00000380829 CCDC179H3BU77 68 aa10.59□□□□□ -0.71
CLCN4-201ENST00000380829 SETD2Q9BYW2 2564 aaPredicted RBP10.59□□□□□ -0.71
CLCN4-201ENST00000380829 ANKRD29Q8N6D5 301 aa10.58□□□□□ -0.72
CLCN4-201ENST00000380829 PHLDA3Q9Y5J5 127 aa10.58□□□□□ -0.72
CLCN4-201ENST00000380829 A0A087WX48 190 aa10.58□□□□□ -0.72
CLCN4-201ENST00000380829 A0A1W2PRX2 142 aa10.58□□□□□ -0.72
CLCN4-201ENST00000380829 RNASE3P12724 160 aaKnown RBP10.58□□□□□ -0.72
CLCN4-201ENST00000380829 SMR3AQ99954 134 aa10.58□□□□□ -0.72
CLCN4-201ENST00000380829 IGLV2-18A0A075B6J9 118 aa10.57□□□□□ -0.72
CLCN4-201ENST00000380829 TCL1BO95988 128 aa10.57□□□□□ -0.72
CLCN4-201ENST00000380829 PLEKHB2Q96CS7 222 aa10.57□□□□□ -0.72
CLCN4-201ENST00000380829 TNFRSF18Q9Y5U5 241 aa10.57□□□□□ -0.72
CLCN4-201ENST00000380829 RPL32P62910 135 aaKnown RBP10.57□□□□□ -0.72
CLCN4-201ENST00000380829 SPINK13Q1W4C9 94 aa10.57□□□□□ -0.72
CLCN4-201ENST00000380829 FAM159AQ6UWV7 190 aa10.57□□□□□ -0.72
CLCN4-201ENST00000380829 Q8N8P6 123 aa10.57□□□□□ -0.72
CLCN4-201ENST00000380829 PEMTQ9UBM1 199 aa10.57□□□□□ -0.72
CLCN4-201ENST00000380829 CITED1Q99966 193 aa10.56□□□□□ -0.72
CLCN4-201ENST00000380829 CD28P10747 220 aa10.56□□□□□ -0.72
CLCN4-201ENST00000380829 PLNP26678 52 aa10.56□□□□□ -0.72
CLCN4-201ENST00000380829 TMEM61Q8N0U2 210 aa10.56□□□□□ -0.72
CLCN4-201ENST00000380829 UBE2D3P61077 147 aa10.55□□□□□ -0.72
CLCN4-201ENST00000380829 UBE2D2P62837 147 aa10.55□□□□□ -0.72
CLCN4-201ENST00000380829 C14orf178Q8N769 122 aaPredicted RBP10.55□□□□□ -0.72
CLCN4-201ENST00000380829 KNCNA6PVL3 124 aa10.55□□□□□ -0.72
CLCN4-201ENST00000380829 CRLF1O75462 422 aa10.55□□□□□ -0.72
CLCN4-201ENST00000380829 CD7P09564 240 aa10.55□□□□□ -0.72
CLCN4-201ENST00000380829 SPXQ9BT56 116 aa10.55□□□□□ -0.72
CLCN4-201ENST00000380829 TRAV4A0A0B4J268 109 aa10.54□□□□□ -0.72
CLCN4-201ENST00000380829 DEFB131AP59861 70 aa10.54□□□□□ -0.72
CLCN4-201ENST00000380829 LAGE3Q14657 143 aa10.54□□□□□ -0.72
CLCN4-201ENST00000380829 NRACQ8N912 160 aa10.54□□□□□ -0.72
CLCN4-201ENST00000380829 RAX2Q96IS3 184 aa10.54□□□□□ -0.72
CLCN4-201ENST00000380829 ODF3Q96PU9 254 aa10.54□□□□□ -0.72
CLCN4-201ENST00000380829 MAST4O15021 2626 aa10.54□□□□□ -0.72
CLCN4-201ENST00000380829 ZNF815PA8K554 130 aa10.54□□□□□ -0.72
CLCN4-201ENST00000380829 A8MWV9 139 aa10.54□□□□□ -0.72
CLCN4-201ENST00000380829 UBE2D1P51668 147 aa10.54□□□□□ -0.72
CLCN4-201ENST00000380829 NDUFV3P56181 108 aaKnown RBP10.54□□□□□ -0.72
CLCN4-201ENST00000380829 SCGB1D4Q6XE38 83 aa10.54□□□□□ -0.72
CLCN4-201ENST00000380829 DYNLRB2Q8TF09 96 aa10.54□□□□□ -0.72
CLCN4-201ENST00000380829 F8VRH5 84 aa10.53□□□□□ -0.72
CLCN4-201ENST00000380829 MED14OSP0DP75 135 aa10.53□□□□□ -0.72
CLCN4-201ENST00000380829 SRSF9Q13242 221 aaKnown RBP eCLIP10.53□□□□□ -0.72
CLCN4-201ENST00000380829 PRADC1Q9BSG0 188 aa10.53□□□□□ -0.72
CLCN4-201ENST00000380829 MUC4Q99102 2169 aa10.53□□□□□ -0.72
CLCN4-201ENST00000380829 DUSP14O95147 198 aaKnown RBP10.53□□□□□ -0.72
CLCN4-201ENST00000380829 RNASE1P07998 156 aaKnown RBP10.53□□□□□ -0.72
CLCN4-201ENST00000380829 LINC01006Q8NI28 216 aa10.53□□□□□ -0.72
CLCN4-201ENST00000380829 CITED2Q99967 270 aaPredicted RBP10.53□□□□□ -0.72
CLCN4-201ENST00000380829 OTOGQ6ZRI0 2925 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms