RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 IGHV3-30-3P0DP02 117 aa12.83□□□□□ -0.36
TRAPPC3-204ENST00000373166 IGHV3-30-5P0DP03 117 aa12.83□□□□□ -0.36
TRAPPC3-204ENST00000373166 LRCOL1A6NCL2 159 aa12.82□□□□□ -0.36
TRAPPC3-204ENST00000373166 CACNG7P62955 275 aa12.82□□□□□ -0.36
TRAPPC3-204ENST00000373166 TOR2AQ5JU69 321 aa12.82□□□□□ -0.36
TRAPPC3-204ENST00000373166 F5H697 171 aa12.81□□□□□ -0.36
TRAPPC3-204ENST00000373166 PLA2G1BP04054 148 aaKnown RBP12.81□□□□□ -0.36
TRAPPC3-204ENST00000373166 DNAH8Q96JB1 4490 aa12.81□□□□□ -0.36
TRAPPC3-204ENST00000373166 TRBV7-3A0A075B6L6 115 aa12.8□□□□□ -0.36
TRAPPC3-204ENST00000373166 KRTAP29-1A8MX34 341 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC3-204ENST00000373166 IBA57-AS1B1ANH7 110 aa12.8□□□□□ -0.36
TRAPPC3-204ENST00000373166 F2Z2F3 143 aa12.8□□□□□ -0.36
TRAPPC3-204ENST00000373166 CEBPGP53567 150 aa12.8□□□□□ -0.36
TRAPPC3-204ENST00000373166 UBE2D3P61077 147 aa12.8□□□□□ -0.36
TRAPPC3-204ENST00000373166 UBE2D2P62837 147 aa12.8□□□□□ -0.36
TRAPPC3-204ENST00000373166 NUDT10Q8NFP7 164 aa12.8□□□□□ -0.36
TRAPPC3-204ENST00000373166 OR10G8Q8NGN5 311 aa12.8□□□□□ -0.36
TRAPPC3-204ENST00000373166 NUDT11Q96G61 164 aa12.8□□□□□ -0.36
TRAPPC3-204ENST00000373166 EIF5A2Q9GZV4 153 aaKnown RBP12.8□□□□□ -0.36
TRAPPC3-204ENST00000373166 RPP21Q9H633 154 aaKnown RBP12.8□□□□□ -0.36
TRAPPC3-204ENST00000373166 K7EN84 100 aa12.79□□□□□ -0.36
TRAPPC3-204ENST00000373166 Q8N814 137 aa12.79□□□□□ -0.36
TRAPPC3-204ENST00000373166 OCC1Q8TAD7 63 aa12.79□□□□□ -0.36
TRAPPC3-204ENST00000373166 FAM30AQ9NZY2 134 aa12.79□□□□□ -0.36
TRAPPC3-204ENST00000373166 MGPP08493 103 aa12.78□□□□□ -0.36
TRAPPC3-204ENST00000373166 LAGE3Q14657 143 aa12.78□□□□□ -0.36
TRAPPC3-204ENST00000373166 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC3-204ENST00000373166 NEXN-AS1Q8NBZ9 246 aa12.78□□□□□ -0.36
TRAPPC3-204ENST00000373166 RNASE7Q9H1E1 156 aaKnown RBP12.78□□□□□ -0.36
TRAPPC3-204ENST00000373166 Q9HAA7 133 aa12.78□□□□□ -0.36
TRAPPC3-204ENST00000373166 KIF25-AS1Q9Y6Z4 181 aa12.78□□□□□ -0.36
TRAPPC3-204ENST00000373166 URGCP-MRPS24S4R325 110 aa12.78□□□□□ -0.36
TRAPPC3-204ENST00000373166 SERTAD4-AS1Q5TG53 156 aa12.77□□□□□ -0.37
TRAPPC3-204ENST00000373166 LYZL1Q6UWQ5 148 aa12.77□□□□□ -0.37
TRAPPC3-204ENST00000373166 DEFB104AQ8WTQ1 72 aa12.77□□□□□ -0.37
TRAPPC3-204ENST00000373166 FAM210AQ96ND0 272 aa12.77□□□□□ -0.37
TRAPPC3-204ENST00000373166 TRGC1P0CF51 173 aa12.76□□□□□ -0.37
TRAPPC3-204ENST00000373166 CTRLP40313 264 aa12.76□□□□□ -0.37
TRAPPC3-204ENST00000373166 HMCN2Q8NDA2 5059 aa12.75□□□□□ -0.37
TRAPPC3-204ENST00000373166 H7C1H1 209 aa12.75□□□□□ -0.37
TRAPPC3-204ENST00000373166 NDUFS6O75380 124 aaKnown RBP12.75□□□□□ -0.37
TRAPPC3-204ENST00000373166 KCNIP4Q6PIL6 250 aa12.75□□□□□ -0.37
TRAPPC3-204ENST00000373166 Q8N3U1 123 aa12.75□□□□□ -0.37
TRAPPC3-204ENST00000373166 SMIM7Q9BQ49 75 aa12.75□□□□□ -0.37
TRAPPC3-204ENST00000373166 UBR4Q5T4S7 5183 aa12.74□□□□□ -0.37
TRAPPC3-204ENST00000373166 GATCO43716 136 aaKnown RBP12.73□□□□□ -0.37
TRAPPC3-204ENST00000373166 WDR73Q6P4I2 378 aa12.73□□□□□ -0.37
TRAPPC3-204ENST00000373166 DAZ4Q86SG3 579 aaKnown RBP12.73□□□□□ -0.37
TRAPPC3-204ENST00000373166 NIT1Q86X76 327 aa12.73□□□□□ -0.37
TRAPPC3-204ENST00000373166 LINC00528Q8N1L1 170 aa12.73□□□□□ -0.37
TRAPPC3-204ENST00000373166 DPH3P1Q9H4G8 78 aa12.73□□□□□ -0.37
TRAPPC3-204ENST00000373166 DAZ3Q9NR90 486 aaKnown RBP12.73□□□□□ -0.37
TRAPPC3-204ENST00000373166 A0A087WX48 190 aa12.72□□□□□ -0.37
TRAPPC3-204ENST00000373166 TRBV6-8A0A0A6YYG3 113 aa12.72□□□□□ -0.37
TRAPPC3-204ENST00000373166 TRAV8-3A0A0A6YYJ7 113 aa12.72□□□□□ -0.37
TRAPPC3-204ENST00000373166 NTF3P20783 257 aa12.72□□□□□ -0.37
TRAPPC3-204ENST00000373166 SUMO4Q6EEV6 95 aa12.72□□□□□ -0.37
TRAPPC3-204ENST00000373166 FAM231DQ6ZW35 169 aa12.72□□□□□ -0.37
TRAPPC3-204ENST00000373166 CHCHD7Q9BUK0 85 aa12.72□□□□□ -0.37
TRAPPC3-204ENST00000373166 TM2D2Q9BX73 214 aa12.72□□□□□ -0.37
TRAPPC3-204ENST00000373166 ZNF727A8MUV8 499 aa12.71□□□□□ -0.37
TRAPPC3-204ENST00000373166 TWIST1Q15672 202 aa12.71□□□□□ -0.37
TRAPPC3-204ENST00000373166 TMEM97Q5BJF2 176 aa12.71□□□□□ -0.37
TRAPPC3-204ENST00000373166 TEX261Q6UWH6 196 aa12.71□□□□□ -0.37
TRAPPC3-204ENST00000373166 CNFNQ9BYD5 112 aa12.71□□□□□ -0.37
TRAPPC3-204ENST00000373166 A8MWL6 223 aa12.7□□□□□ -0.38
TRAPPC3-204ENST00000373166 M0QY20 66 aa12.7□□□□□ -0.38
TRAPPC3-204ENST00000373166 SRP19P09132 144 aaKnown RBP12.7□□□□□ -0.38
TRAPPC3-204ENST00000373166 ELOBQ15370 118 aa12.7□□□□□ -0.38
TRAPPC3-204ENST00000373166 Q6ZSA8 131 aa12.7□□□□□ -0.38
TRAPPC3-204ENST00000373166 DNAJC30Q96LL9 226 aa12.7□□□□□ -0.38
TRAPPC3-204ENST00000373166 PKIAP61925 76 aa12.69□□□□□ -0.38
TRAPPC3-204ENST00000373166 CT83Q5H943 113 aa12.69□□□□□ -0.38
TRAPPC3-204ENST00000373166 LINC01551Q86U37 167 aa12.69□□□□□ -0.38
TRAPPC3-204ENST00000373166 GTSF1Q8WW33 167 aa12.69□□□□□ -0.38
TRAPPC3-204ENST00000373166 TMEM262E9PQX1 116 aa12.68□□□□□ -0.38
TRAPPC3-204ENST00000373166 RASL11AQ6T310 242 aa12.68□□□□□ -0.38
TRAPPC3-204ENST00000373166 SMIM15Q7Z3B0 74 aa12.68□□□□□ -0.38
TRAPPC3-204ENST00000373166 RMI2Q96E14 147 aa12.68□□□□□ -0.38
TRAPPC3-204ENST00000373166 CHCHD5Q9BSY4 110 aa12.68□□□□□ -0.38
TRAPPC3-204ENST00000373166 KLK12Q9UKR0 248 aa12.68□□□□□ -0.38
TRAPPC3-204ENST00000373166 BORCS7Q96B45 105 aa12.67□□□□□ -0.38
TRAPPC3-204ENST00000373166 TRBV25-1A0A075B6N4 114 aa12.66□□□□□ -0.38
TRAPPC3-204ENST00000373166 PGLYRP4Q96LB8 373 aa12.66□□□□□ -0.38
TRAPPC3-204ENST00000373166 COX11Q9Y6N1 276 aa12.66□□□□□ -0.38
TRAPPC3-204ENST00000373166 LRP1Q07954 4544 aaKnown RBP12.65□□□□□ -0.38
TRAPPC3-204ENST00000373166 PEA15Q15121 130 aa12.65□□□□□ -0.38
TRAPPC3-204ENST00000373166 FAM74A3Q4VXF1 159 aa12.65□□□□□ -0.38
TRAPPC3-204ENST00000373166 C15orf54Q8N8G6 183 aa12.65□□□□□ -0.38
TRAPPC3-204ENST00000373166 MPV17L2Q567V2 206 aa12.64□□□□□ -0.39
TRAPPC3-204ENST00000373166 LCE2DQ5TA82 110 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC3-204ENST00000373166 NTM-AS1Q6ZSK4 140 aa12.64□□□□□ -0.39
TRAPPC3-204ENST00000373166 TSKUQ8WUA8 353 aa12.64□□□□□ -0.39
TRAPPC3-204ENST00000373166 UBE2WQ96B02 151 aa12.64□□□□□ -0.39
TRAPPC3-204ENST00000373166 NIT2Q9NQR4 276 aa12.64□□□□□ -0.39
TRAPPC3-204ENST00000373166 OSTCQ9NRP0 149 aa12.64□□□□□ -0.39
TRAPPC3-204ENST00000373166 IGKV2D-24A0A075B6R9 120 aa12.63□□□□□ -0.39
TRAPPC3-204ENST00000373166 IGHV1-24A0A0C4DH33 117 aa12.63□□□□□ -0.39
TRAPPC3-204ENST00000373166 CRPP02741 224 aa12.63□□□□□ -0.39
TRAPPC3-204ENST00000373166 Q0VG73 95 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms