RNA–Protein interactions for RNA: ENST00000363574.1

RNU6-1339P-201, Transcript of RNA, U6 small nuclear 1339, pseudogene, humanhuman

BASIC

Gene RNU6-1339P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1339P-201ENST00000363574 AKAIN1P0CW23 69 aa0.9□□□□□ -2.27
RNU6-1339P-201ENST00000363574 INSL4Q14641 139 aa0.9□□□□□ -2.27
RNU6-1339P-201ENST00000363574 PP6455Q8WZ26 134 aa0.9□□□□□ -2.27
RNU6-1339P-201ENST00000363574 ASH1LQ9NR48 2969 aaKnown RBP0.9□□□□□ -2.27
RNU6-1339P-201ENST00000363574 LINC00312Q9Y6C7 94 aa0.9□□□□□ -2.27
RNU6-1339P-201ENST00000363574 CASKIN1Q8WXD9 1431 aa0.89□□□□□ -2.27
RNU6-1339P-201ENST00000363574 NALCNQ8IZF0 1738 aa0.89□□□□□ -2.27
RNU6-1339P-201ENST00000363574 ZNF462Q96JM2 2506 aa0.89□□□□□ -2.27
RNU6-1339P-201ENST00000363574 GVQW2A0A096LPI5 108 aaPredicted RBP0.89□□□□□ -2.27
RNU6-1339P-201ENST00000363574 LINC00587B1AMM8 73 aa0.89□□□□□ -2.27
RNU6-1339P-201ENST00000363574 APOC4-APOC2K7ER74 178 aa0.89□□□□□ -2.27
RNU6-1339P-201ENST00000363574 C2orf88Q9BSF0 95 aa0.89□□□□□ -2.27
RNU6-1339P-201ENST00000363574 BPESC1Q9GZL8 116 aa0.89□□□□□ -2.27
RNU6-1339P-201ENST00000363574 SCN3BQ9NY72 215 aa0.89□□□□□ -2.27
RNU6-1339P-201ENST00000363574 PARP14Q460N5 1801 aa0.89□□□□□ -2.27
RNU6-1339P-201ENST00000363574 MED13LQ71F56 2210 aa0.88□□□□□ -2.27
RNU6-1339P-201ENST00000363574 ARFGEF1Q9Y6D6 1849 aa0.88□□□□□ -2.27
RNU6-1339P-201ENST00000363574 MIF4GDA9UHW6 222 aaKnown RBP0.88□□□□□ -2.27
RNU6-1339P-201ENST00000363574 HCG22E2RYF7 251 aa0.88□□□□□ -2.27
RNU6-1339P-201ENST00000363574 SIX6O95475 246 aa0.88□□□□□ -2.27
RNU6-1339P-201ENST00000363574 SPINK7P58062 85 aa0.88□□□□□ -2.27
RNU6-1339P-201ENST00000363574 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.88□□□□□ -2.27
RNU6-1339P-201ENST00000363574 TNS1Q9HBL0 1735 aaKnown RBP0.88□□□□□ -2.27
RNU6-1339P-201ENST00000363574 KDM6BO15054 1643 aa0.88□□□□□ -2.27
RNU6-1339P-201ENST00000363574 NOTCH1P46531 2555 aa0.87□□□□□ -2.27
RNU6-1339P-201ENST00000363574 TRGV1A0A0A0MS02 117 aa0.87□□□□□ -2.27
RNU6-1339P-201ENST00000363574 PIGBOS1A0A0B4J2F0 54 aa0.87□□□□□ -2.27
RNU6-1339P-201ENST00000363574 NCOA3Q9Y6Q9 1424 aa0.87□□□□□ -2.27
RNU6-1339P-201ENST00000363574 CDK13Q14004 1512 aaKnown RBP0.86□□□□□ -2.27
RNU6-1339P-201ENST00000363574 TRAV13-2A0A0B4J235 113 aa0.86□□□□□ -2.27
RNU6-1339P-201ENST00000363574 ACYP2P14621 99 aa0.86□□□□□ -2.27
RNU6-1339P-201ENST00000363574 SMIM11BQ8TCY0 68 aa0.86□□□□□ -2.27
RNU6-1339P-201ENST00000363574 A2ML1A8K2U0 1454 aa0.86□□□□□ -2.27
RNU6-1339P-201ENST00000363574 QRICH2Q9H0J4 1663 aa0.85□□□□□ -2.27
RNU6-1339P-201ENST00000363574 SSC5DA1L4H1 1573 aa0.85□□□□□ -2.27
RNU6-1339P-201ENST00000363574 APOC2P02655 101 aa0.85□□□□□ -2.27
RNU6-1339P-201ENST00000363574 CATR1Q13166 79 aa0.85□□□□□ -2.27
RNU6-1339P-201ENST00000363574 WFDC6Q9BQY6 131 aa0.85□□□□□ -2.27
RNU6-1339P-201ENST00000363574 NWD2Q9ULI1 1742 aa0.85□□□□□ -2.27
RNU6-1339P-201ENST00000363574 PPP3R2Q96LZ3 170 aa0.84□□□□□ -2.27
RNU6-1339P-201ENST00000363574 PRR15LQ9BU68 103 aa0.84□□□□□ -2.27
RNU6-1339P-201ENST00000363574 LRRC37A3O60309 1634 aa0.84□□□□□ -2.28
RNU6-1339P-201ENST00000363574 SIPA1L3O60292 1781 aaPredicted RBP0.83□□□□□ -2.28
RNU6-1339P-201ENST00000363574 SMG6Q86US8 1419 aaKnown RBP0.83□□□□□ -2.28
RNU6-1339P-201ENST00000363574 TNFP01375 233 aa0.83□□□□□ -2.28
RNU6-1339P-201ENST00000363574 VMO1Q7Z5L0 202 aa0.83□□□□□ -2.28
RNU6-1339P-201ENST00000363574 ARAP2Q8WZ64 1704 aa0.83□□□□□ -2.28
RNU6-1339P-201ENST00000363574 WDR7Q9Y4E6 1490 aa0.82□□□□□ -2.28
RNU6-1339P-201ENST00000363574 SNAPC5O75971 98 aa0.82□□□□□ -2.28
RNU6-1339P-201ENST00000363574 TMEM203Q969S6 136 aa0.82□□□□□ -2.28
RNU6-1339P-201ENST00000363574 AQP10Q96PS8 301 aa0.82□□□□□ -2.28
RNU6-1339P-201ENST00000363574 PLAC8Q9NZF1 115 aa0.82□□□□□ -2.28
RNU6-1339P-201ENST00000363574 SCP2D1Q9UJQ7 156 aa0.82□□□□□ -2.28
RNU6-1339P-201ENST00000363574 F5P12259 2224 aa0.81□□□□□ -2.28
RNU6-1339P-201ENST00000363574 TMEM14DPA8MWL7 114 aa0.81□□□□□ -2.28
RNU6-1339P-201ENST00000363574 OOSP1A8MZH6 123 aa0.81□□□□□ -2.28
RNU6-1339P-201ENST00000363574 F6UZH7 168 aa0.81□□□□□ -2.28
RNU6-1339P-201ENST00000363574 CORTO00230 105 aa0.81□□□□□ -2.28
RNU6-1339P-201ENST00000363574 IFNGP01579 166 aa0.81□□□□□ -2.28
RNU6-1339P-201ENST00000363574 C10orf128Q5T292 105 aa0.81□□□□□ -2.28
RNU6-1339P-201ENST00000363574 MRPL54Q6P161 138 aaKnown RBP0.81□□□□□ -2.28
RNU6-1339P-201ENST00000363574 Q6ZRX8 168 aa0.81□□□□□ -2.28
RNU6-1339P-201ENST00000363574 GNG8Q9UK08 70 aa0.81□□□□□ -2.28
RNU6-1339P-201ENST00000363574 ZNF469Q96JG9 3925 aaPredicted RBP0.81□□□□□ -2.28
RNU6-1339P-201ENST00000363574 CPSF1Q10570 1443 aaKnown RBP0.81□□□□□ -2.28
RNU6-1339P-201ENST00000363574 PXDNQ92626 1479 aa0.8□□□□□ -2.28
RNU6-1339P-201ENST00000363574 TRAV1-2A0A0B4J238 106 aa0.8□□□□□ -2.28
RNU6-1339P-201ENST00000363574 TPPP2P59282 170 aa0.8□□□□□ -2.28
RNU6-1339P-201ENST00000363574 C8orf59Q8N0T1 100 aaPredicted RBP0.8□□□□□ -2.28
RNU6-1339P-201ENST00000363574 TTC9CQ8N5M4 171 aa0.8□□□□□ -2.28
RNU6-1339P-201ENST00000363574 SPANXDQ9BXN6 97 aa0.8□□□□□ -2.28
RNU6-1339P-201ENST00000363574 CUL7Q14999 1698 aa0.8□□□□□ -2.28
RNU6-1339P-201ENST00000363574 KTN1Q86UP2 1357 aaKnown RBP0.8□□□□□ -2.28
RNU6-1339P-201ENST00000363574 PATJQ8NI35 1801 aa0.8□□□□□ -2.28
RNU6-1339P-201ENST00000363574 MYOM2P54296 1465 aa0.8□□□□□ -2.28
RNU6-1339P-201ENST00000363574 ZMYM4Q5VZL5 1548 aa0.79□□□□□ -2.28
RNU6-1339P-201ENST00000363574 PEG3Q9GZU2 1588 aa0.79□□□□□ -2.28
RNU6-1339P-201ENST00000363574 C9orf153Q5TBE3 101 aa0.79□□□□□ -2.28
RNU6-1339P-201ENST00000363574 DOCK1Q14185 1865 aa0.79□□□□□ -2.28
RNU6-1339P-201ENST00000363574 PPIP5K1Q6PFW1 1433 aa0.79□□□□□ -2.28
RNU6-1339P-201ENST00000363574 EIF4G3O43432 1585 aaKnown RBP0.79□□□□□ -2.28
RNU6-1339P-201ENST00000363574 PPP1R17O96001 155 aa0.78□□□□□ -2.28
RNU6-1339P-201ENST00000363574 GNG4P50150 75 aa0.78□□□□□ -2.28
RNU6-1339P-201ENST00000363574 CCL18P55774 89 aa0.78□□□□□ -2.28
RNU6-1339P-201ENST00000363574 C5orf38Q86SI9 138 aa0.78□□□□□ -2.28
RNU6-1339P-201ENST00000363574 BAGE3Q86Y29 109 aa0.78□□□□□ -2.28
RNU6-1339P-201ENST00000363574 GOLGA3Q08378 1498 aa0.78□□□□□ -2.28
RNU6-1339P-201ENST00000363574 PRH1P02810 166 aa0.77□□□□□ -2.29
RNU6-1339P-201ENST00000363574 Q5VV11 94 aa0.77□□□□□ -2.29
RNU6-1339P-201ENST00000363574 CYP4F30PQ9H0H9 118 aa0.77□□□□□ -2.29
RNU6-1339P-201ENST00000363574 IER3IP1Q9Y5U9 82 aa0.77□□□□□ -2.29
RNU6-1339P-201ENST00000363574 MEGF8Q7Z7M0 2845 aa0.76□□□□□ -2.29
RNU6-1339P-201ENST00000363574 ROBO1Q9Y6N7 1651 aa0.76□□□□□ -2.29
RNU6-1339P-201ENST00000363574 LAMC3Q9Y6N6 1575 aa0.76□□□□□ -2.29
RNU6-1339P-201ENST00000363574 SMIM6P0DI80 62 aa0.76□□□□□ -2.29
RNU6-1339P-201ENST00000363574 S100A1P23297 94 aa0.76□□□□□ -2.29
RNU6-1339P-201ENST00000363574 GCHFRP30047 84 aa0.76□□□□□ -2.29
RNU6-1339P-201ENST00000363574 PPP3R1P63098 170 aa0.76□□□□□ -2.29
RNU6-1339P-201ENST00000363574 COMMD6Q7Z4G1 85 aa0.76□□□□□ -2.29
RNU6-1339P-201ENST00000363574 PROK2Q9HC23 129 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms